RNA–Protein interactions for RNA: ENST00000620916.2

MATR3-228, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,134 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-228ENST00000620916 GNEQ9Y223 722 aaKnown RBP5.43□□□□□ -1.54
MATR3-228ENST00000620916 SLC27A5Q9Y2P5 690 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 TRIM17Q9Y577 477 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 AFDNP55196 1824 aaKnown RBP5.43□□□□□ -1.54
MATR3-228ENST00000620916 VPS37CA5D8V6 355 aaPredicted RBP5.43□□□□□ -1.54
MATR3-228ENST00000620916 SIGLEC16A6NMB1 481 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 LACTBL1A8MY62 500 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 B8ZZF3 427 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 USP17L15C9J2P7 530 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 USP17L10C9JJH3 530 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 USP17L13C9JLJ4 530 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 USP17L12C9JPN9 530 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 USP17L11C9JVI0 530 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 USP17L21D6R901 530 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 USP17L18D6R9N7 530 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 USP17L22D6RA61 530 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 USP17L17D6RBQ6 530 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 USP17L19D6RCP7 530 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 USP17L20D6RJB6 530 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 FYB1O15117 783 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 ZW10O43264 779 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 STX10O60499 249 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 ECDO95905 644 aaPredicted RBP5.43□□□□□ -1.54
MATR3-228ENST00000620916 ITGB3P05106 788 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 PCNAP12004 261 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 CRABP2P29373 138 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 CHRNA5P30532 468 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 MTHFRP42898 656 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 CRKLP46109 303 aaKnown RBP5.43□□□□□ -1.54
MATR3-228ENST00000620916 CLDN10P78369 228 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 CD83Q01151 205 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 USP17L24Q0WX57 530 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 RAPGEF1Q13905 1077 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 ZBTB41Q5SVQ8 909 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 SPOPLQ6IQ16 392 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 METTL2BQ6P1Q9 378 aaKnown RBP5.43□□□□□ -1.54
MATR3-228ENST00000620916 DHRS4L2Q6PKH6 230 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 CCNI2Q6ZMN8 369 aaPredicted RBP5.43□□□□□ -1.54
MATR3-228ENST00000620916 CYP2U1Q7Z449 544 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 SHCBP1Q8NEM2 672 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 SLC39A7Q92504 469 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 TTC9Q92623 222 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 NELL1Q92832 810 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 METTL2AQ96IZ6 378 aaKnown RBP5.43□□□□□ -1.54
MATR3-228ENST00000620916 PGBD1Q96JS3 809 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 PANX2Q96RD6 677 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 MRPL9Q9BYD2 267 aaKnown RBP5.43□□□□□ -1.54
MATR3-228ENST00000620916 FOXP3Q9BZS1 431 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 DNAJC25Q9H1X3 360 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 SNX25Q9H3E2 840 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 C8orf33Q9H7E9 229 aaPredicted RBP5.43□□□□□ -1.54
MATR3-228ENST00000620916 FANCEQ9HB96 536 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 ARHGEF3Q9NR81 526 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 C9orf78Q9NZ63 289 aaPredicted RBP5.43□□□□□ -1.54
MATR3-228ENST00000620916 GMIPQ9P107 970 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 MBD2Q9UBB5 411 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 TNFRSF10DQ9UBN6 386 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 HDAC9Q9UKV0 1011 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 GRID1Q9ULK0 1009 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 MYO3BQ8WXR4 1341 aa5.43□□□□□ -1.54
MATR3-228ENST00000620916 OR6C65A6NJZ3 312 aa5.42□□□□□ -1.54
MATR3-228ENST00000620916 SOBPA7XYQ1 873 aa5.42□□□□□ -1.54
MATR3-228ENST00000620916 RSPH10B2B2RC85 870 aa5.42□□□□□ -1.54
MATR3-228ENST00000620916 TLR3O15455 904 aaKnown RBP5.42□□□□□ -1.54
MATR3-228ENST00000620916 CNOT3O75175 753 aaKnown RBP5.42□□□□□ -1.54
MATR3-228ENST00000620916 TCEA3O75764 348 aa5.42□□□□□ -1.54
MATR3-228ENST00000620916 SERPINB2P05120 415 aa5.42□□□□□ -1.54
MATR3-228ENST00000620916 SPATA31D3P0C874 917 aa5.42□□□□□ -1.54
MATR3-228ENST00000620916 RSPH10BP0C881 870 aa5.42□□□□□ -1.54
MATR3-228ENST00000620916 MYBL1P10243 752 aa5.42□□□□□ -1.54
MATR3-228ENST00000620916 MTHFD1P11586 935 aaKnown RBP5.42□□□□□ -1.54
MATR3-228ENST00000620916 TMOD1P28289 359 aa5.42□□□□□ -1.54
MATR3-228ENST00000620916 CASP14P31944 242 aa5.42□□□□□ -1.54
MATR3-228ENST00000620916 CDK7P50613 346 aa5.42□□□□□ -1.54
MATR3-228ENST00000620916 HNRNPFP52597 415 aaKnown RBP5.42□□□□□ -1.54
MATR3-228ENST00000620916 MRPS15P82914 257 aaKnown RBP5.42□□□□□ -1.54
MATR3-228ENST00000620916 PSMD6Q15008 389 aa5.42□□□□□ -1.54
MATR3-228ENST00000620916 FAM133BQ5BKY9 247 aaKnown RBP5.42□□□□□ -1.54
MATR3-228ENST00000620916 FAM26DQ5JW98 314 aa5.42□□□□□ -1.54
MATR3-228ENST00000620916 SPATA31D4Q6ZUB0 917 aa5.42□□□□□ -1.54
MATR3-228ENST00000620916 USP50Q70EL3 339 aaPredicted RBP5.42□□□□□ -1.54
MATR3-228ENST00000620916 LIMS2Q7Z4I7 341 aa5.42□□□□□ -1.54
MATR3-228ENST00000620916 FAM83AQ86UY5 434 aa5.42□□□□□ -1.54
MATR3-228ENST00000620916 CLVS1Q8IUQ0 354 aaPredicted RBP5.42□□□□□ -1.54
MATR3-228ENST00000620916 RTKN2Q8IZC4 609 aa5.42□□□□□ -1.54
MATR3-228ENST00000620916 ELMOD1Q8N336 334 aa5.42□□□□□ -1.54
MATR3-228ENST00000620916 FLCNQ8NFG4 579 aa5.42□□□□□ -1.54
MATR3-228ENST00000620916 LILRB4Q8NHJ6 448 aa5.42□□□□□ -1.54
MATR3-228ENST00000620916 RIN2Q8WYP3 895 aaPredicted RBP5.42□□□□□ -1.54
MATR3-228ENST00000620916 FAM149B1Q96BN6 582 aa5.42□□□□□ -1.54
MATR3-228ENST00000620916 SGK3Q96BR1 496 aa5.42□□□□□ -1.54
MATR3-228ENST00000620916 ZNF333Q96JL9 665 aa5.42□□□□□ -1.54
MATR3-228ENST00000620916 TSEN34Q9BSV6 310 aaKnown RBP5.42□□□□□ -1.54
MATR3-228ENST00000620916 ALG1Q9BT22 464 aa5.42□□□□□ -1.54
MATR3-228ENST00000620916 API5Q9BZZ5 524 aaKnown RBP5.42□□□□□ -1.54
MATR3-228ENST00000620916 MCOLN1Q9GZU1 580 aa5.42□□□□□ -1.54
MATR3-228ENST00000620916 CDH19Q9H159 772 aa5.42□□□□□ -1.54
MATR3-228ENST00000620916 ZSWIM4Q9H7M6 989 aa5.42□□□□□ -1.54
MATR3-228ENST00000620916 C12orf4Q9NQ89 552 aa5.42□□□□□ -1.54
MATR3-228ENST00000620916 TAS2R7Q9NYW3 318 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms