RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 TRIM49P0CI25 452 aa14.8□□□□□ -0.04
NEK3-210ENST00000620675 TRIM49CP0CI26 452 aa14.8□□□□□ -0.04
NEK3-210ENST00000620675 DLATP10515 647 aaKnown RBP14.8□□□□□ -0.04
NEK3-210ENST00000620675 ERCC5P28715 1186 aaPredicted RBP14.8□□□□□ -0.04
NEK3-210ENST00000620675 PPP2R3AQ06190 1150 aa14.8□□□□□ -0.04
NEK3-210ENST00000620675 NCAPHQ15003 741 aa14.8□□□□□ -0.04
NEK3-210ENST00000620675 FAM43BQ6ZT52 329 aaPredicted RBP14.8□□□□□ -0.04
NEK3-210ENST00000620675 TMEM173Q86WV6 379 aaPredicted RBP14.8□□□□□ -0.04
NEK3-210ENST00000620675 FAM186BQ8IYM0 893 aa14.8□□□□□ -0.04
NEK3-210ENST00000620675 AOPEPQ8N6M6 819 aa14.8□□□□□ -0.04
NEK3-210ENST00000620675 SP7Q8TDD2 431 aaPredicted RBP14.8□□□□□ -0.04
NEK3-210ENST00000620675 ZNF516Q92618 1163 aa14.8□□□□□ -0.04
NEK3-210ENST00000620675 KIF12Q96FN5 646 aa14.8□□□□□ -0.04
NEK3-210ENST00000620675 RPS6KC1Q96S38 1066 aa14.8□□□□□ -0.04
NEK3-210ENST00000620675 HSD3B7Q9H2F3 369 aa14.8□□□□□ -0.04
NEK3-210ENST00000620675 NKX2-4Q9H2Z4 354 aa14.8□□□□□ -0.04
NEK3-210ENST00000620675 LINC01553A4QN01 128 aa14.8□□□□□ -0.04
NEK3-210ENST00000620675 CASTOR2A6NHX0 329 aa14.8□□□□□ -0.04
NEK3-210ENST00000620675 PPEF2O14830 753 aa14.8□□□□□ -0.04
NEK3-210ENST00000620675 KCNE1P15382 129 aa14.8□□□□□ -0.04
NEK3-210ENST00000620675 RPL13P26373 211 aaKnown RBP14.8□□□□□ -0.04
NEK3-210ENST00000620675 MYBPC2Q14324 1141 aa14.8□□□□□ -0.04
NEK3-210ENST00000620675 ZBTB6Q15916 424 aa14.8□□□□□ -0.04
NEK3-210ENST00000620675 DHX40Q8IX18 779 aaKnown RBP14.8□□□□□ -0.04
NEK3-210ENST00000620675 UBN1Q9NPG3 1134 aa14.8□□□□□ -0.04
NEK3-210ENST00000620675 MTUS1Q9ULD2 1270 aa14.8□□□□□ -0.04
NEK3-210ENST00000620675 FRMD4BQ9Y2L6 1034 aa14.8□□□□□ -0.04
NEK3-210ENST00000620675 NFE2L3Q9Y4A8 694 aa14.8□□□□□ -0.04
NEK3-210ENST00000620675 LRRIQ3A6PVS8 624 aaPredicted RBP14.79□□□□□ -0.04
NEK3-210ENST00000620675 KIAA0391O15091 583 aaKnown RBP14.79□□□□□ -0.04
NEK3-210ENST00000620675 ZC3H11AO75152 810 aaKnown RBP eCLIP14.79□□□□□ -0.045e-6■■□□□ 12.3
NEK3-210ENST00000620675 THP07101 528 aa14.79□□□□□ -0.04
NEK3-210ENST00000620675 PSMC2P35998 433 aaKnown RBP14.79□□□□□ -0.04
NEK3-210ENST00000620675 RNASELQ05823 741 aaKnown RBP14.79□□□□□ -0.04
NEK3-210ENST00000620675 DSC1Q08554 894 aa14.79□□□□□ -0.04
NEK3-210ENST00000620675 PSMD6Q15008 389 aa14.79□□□□□ -0.04
NEK3-210ENST00000620675 CMTR2Q8IYT2 770 aaKnown RBP14.79□□□□□ -0.04
NEK3-210ENST00000620675 PARD3BQ8TEW8 1205 aa14.79□□□□□ -0.04
NEK3-210ENST00000620675 ELMO3Q96BJ8 720 aa14.79□□□□□ -0.04
NEK3-210ENST00000620675 MTMR12Q9C0I1 747 aa14.79□□□□□ -0.04
NEK3-210ENST00000620675 CERS4Q9HA82 394 aa14.79□□□□□ -0.04
NEK3-210ENST00000620675 DACH1Q9UI36 760 aa14.79□□□□□ -0.04
NEK3-210ENST00000620675 HOXA2O43364 376 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 ITGB1P05556 798 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 DNAJB2P25686 324 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 IQCB1Q15051 598 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 KYAT1Q16773 422 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 LRSAM1Q6UWE0 723 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 COLGALT2Q8IYK4 626 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 LRRC43Q8N309 656 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 URGCPQ8TCY9 931 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 BCL7CQ8WUZ0 217 aaPredicted RBP14.78□□□□□ -0.04
NEK3-210ENST00000620675 C17orf80Q9BSJ5 609 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 PLEKHA5Q9HAU0 1116 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 KIAA1586Q9HCI6 787 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 FANCLQ9NW38 375 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 PCDHA11Q9Y5I1 949 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 PRRC2BQ5JSZ5 2229 aaKnown RBP14.78□□□□□ -0.04
NEK3-210ENST00000620675 SLC11A1P49279 550 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 ZNF165P49910 485 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 TFAMQ00059 246 aaKnown RBP14.78□□□□□ -0.04
NEK3-210ENST00000620675 TAP1Q03518 808 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 PPP3CAQ08209 521 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 GRIK3Q13003 919 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 TMEM132DQ14C87 1099 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 SPATA1Q5VX52 437 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 FOXR2Q6PJQ5 311 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 CREBRFQ8IUR6 639 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 FIBCD1Q8N539 461 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 C3orf58Q8NDZ4 430 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 ENOX1Q8TC92 643 aaKnown RBP14.78□□□□□ -0.04
NEK3-210ENST00000620675 LRCH3Q96II8 777 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 CEP63Q96MT8 703 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 ASB7Q9H672 318 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 CBX8Q9HC52 389 aa14.78□□□□□ -0.04
NEK3-210ENST00000620675 PRG3Q9Y2Y8 225 aaPredicted RBP14.78□□□□□ -0.04
NEK3-210ENST00000620675 XIRP2A4UGR9 3374 aa14.77□□□□□ -0.04
NEK3-210ENST00000620675 LRRN2O75325 713 aa14.77□□□□□ -0.04
NEK3-210ENST00000620675 EPB41P11171 864 aaKnown RBP14.77□□□□□ -0.04
NEK3-210ENST00000620675 CLCNKBP51801 687 aa14.77□□□□□ -0.04
NEK3-210ENST00000620675 BFSP1Q12934 665 aa14.77□□□□□ -0.04
NEK3-210ENST00000620675 LRIT3Q3SXY7 679 aa14.77□□□□□ -0.04
NEK3-210ENST00000620675 FILIP1Q7Z7B0 1213 aa14.77□□□□□ -0.04
NEK3-210ENST00000620675 LUZP1Q86V48 1076 aa14.77□□□□□ -0.04
NEK3-210ENST00000620675 HASPINQ8TF76 798 aa14.77□□□□□ -0.04
NEK3-210ENST00000620675 CNOT6LQ96LI5 555 aaKnown RBP14.77□□□□□ -0.04
NEK3-210ENST00000620675 MMRN2Q9H8L6 949 aa14.77□□□□□ -0.04
NEK3-210ENST00000620675 COL6A3P12111 3177 aa14.77□□□□□ -0.05
NEK3-210ENST00000620675 COL4A4P53420 1690 aaPredicted RBP14.77□□□□□ -0.05
NEK3-210ENST00000620675 IL18RAPO95256 599 aa14.77□□□□□ -0.05
NEK3-210ENST00000620675 GALTP07902 379 aa14.77□□□□□ -0.05
NEK3-210ENST00000620675 VAMP7P51809 220 aa14.77□□□□□ -0.05
NEK3-210ENST00000620675 BCAR1P56945 870 aa14.77□□□□□ -0.05
NEK3-210ENST00000620675 MYL5Q02045 173 aa14.77□□□□□ -0.05
NEK3-210ENST00000620675 TPD52L1Q16890 204 aaPredicted RBP14.77□□□□□ -0.05
NEK3-210ENST00000620675 SPOUT1Q5T280 376 aaKnown RBP14.77□□□□□ -0.05
NEK3-210ENST00000620675 CD300LGQ6UXG3 332 aa14.77□□□□□ -0.05
NEK3-210ENST00000620675 GAS2L3Q86XJ1 694 aa14.77□□□□□ -0.05
NEK3-210ENST00000620675 C1orf127Q8N9H9 656 aa14.77□□□□□ -0.05
NEK3-210ENST00000620675 CXorf38Q8TB03 319 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms