RNA–Protein interactions for RNA: ENST00000619564.3

FGFR1-241, Transcript of fibroblast growth factor receptor 1, human

TSL 5 BASIC

Gene FGFR1, Length 5,482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-241	ENST00000619564	STKLD1	Q8NE28	680 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	C7orf25	Q9BPX7	421 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	ZFAT	Q9P243	1243 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	FAM95C	A0A1B0GW59	222 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	PDHB	P11177	359 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	KRT17	Q04695	432 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	DGKD	Q16760	1214 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	FBXO38	Q6PIJ6	1188 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	TBC1D19	Q8N5T2	526 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	RNF17	Q9BXT8	1623 aa	Known RBP	21.32	■■□□□ 1
FGFR1-241	ENST00000619564	TMEM62	Q0P6H9	643 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	PPP4R4	Q6NUP7	873 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	BARGIN	Q6ZT62	677 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	MARCH10	Q8NA82	808 aa	Predicted RBP	21.32	■■□□□ 1
FGFR1-241	ENST00000619564	IGDCC4	Q8TDY8	1250 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	MXRA8	Q9BRK3	442 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	PCDHGB4	Q9UN71	923 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	KCNN4	O15554	427 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	HAUS5	O94927	633 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	NTSR2	O95665	410 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	PRAMEF18	Q5VWM3	479 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	DHX40	Q8IX18	779 aa	Known RBP	21.32	■■□□□ 1
FGFR1-241	ENST00000619564	DDIAS	Q8IXT1	998 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	ZNF512	Q96ME7	567 aa	Predicted RBP	21.32	■■□□□ 1
FGFR1-241	ENST00000619564	SEPT5	Q99719	369 aa	Predicted RBP	21.32	■■□□□ 1
FGFR1-241	ENST00000619564	TRPM1	Q7Z4N2	1603 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	LRRC7	Q96NW7	1537 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	RASA1	P20936	1047 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	EEF1D	P29692	281 aa	Known RBP	21.32	■■□□□ 1
FGFR1-241	ENST00000619564	PDCL	Q13371	301 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	ATF7IP2	Q5U623	682 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	XRRA1	Q6P2D8	792 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	ATPAF2	Q8N5M1	289 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	LRRC37B	Q96QE4	947 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	SENP7	Q9BQF6	1050 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	DEFB129	Q9H1M3	183 aa		21.32	■■□□□ 1
FGFR1-241	ENST00000619564	AARS	P49588	968 aa	Known RBP eCLIP	21.31	■■□□□ 1
FGFR1-241	ENST00000619564	SMAD1	Q15797	465 aa	Known RBP	21.31	■■□□□ 1
FGFR1-241	ENST00000619564	UVRAG	Q9P2Y5	699 aa		21.31	■■□□□ 1
FGFR1-241	ENST00000619564	HBP1	O60381	514 aa		21.31	■■□□□ 1
FGFR1-241	ENST00000619564	FMO5	P49326	533 aa		21.31	■■□□□ 1
FGFR1-241	ENST00000619564	CPT1A	P50416	773 aa		21.31	■■□□□ 1
FGFR1-241	ENST00000619564	HIF1A	Q16665	826 aa		21.31	■■□□□ 1
FGFR1-241	ENST00000619564	MTHFD1L	Q6UB35	978 aa		21.31	■■□□□ 1
FGFR1-241	ENST00000619564	ZNF467	Q7Z7K2	595 aa	Predicted RBP	21.31	■■□□□ 1
FGFR1-241	ENST00000619564	TRIML2	Q8N7C3	387 aa		21.31	■■□□□ 1
FGFR1-241	ENST00000619564	RNPC3	Q96LT9	517 aa	Known RBP	21.31	■■□□□ 1
FGFR1-241	ENST00000619564	EML4	Q9HC35	981 aa	Known RBP	21.31	■■□□□ 1
FGFR1-241	ENST00000619564	PRMT7	Q9NVM4	692 aa	Predicted RBP	21.31	■■□□□ 1
FGFR1-241	ENST00000619564	HMBS	P08397	361 aa		21.31	■■□□□ 1
FGFR1-241	ENST00000619564	PDGFRB	P09619	1106 aa		21.31	■■□□□ 1
FGFR1-241	ENST00000619564	PNMA6A	P0CW24	399 aa	Predicted RBP	21.31	■■□□□ 1
FGFR1-241	ENST00000619564	DPEP1	P16444	411 aa		21.31	■■□□□ 1
FGFR1-241	ENST00000619564	ATP6V1E1	P36543	226 aa		21.31	■■□□□ 1
FGFR1-241	ENST00000619564	SYTL3	Q4VX76	610 aa		21.31	■■□□□ 1
FGFR1-241	ENST00000619564	TMEM259	Q4ZIN3	620 aa		21.31	■■□□□ 1
FGFR1-241	ENST00000619564	ANKS3	Q6ZW76	656 aa		21.31	■■□□□ 1
FGFR1-241	ENST00000619564	KDELC2	Q7Z4H8	507 aa		21.31	■■□□□ 1
FGFR1-241	ENST00000619564	RBBP8NL	Q8NC74	664 aa	Predicted RBP	21.31	■■□□□ 1
FGFR1-241	ENST00000619564	ATL2	Q8NHH9	583 aa		21.31	■■□□□ 1
FGFR1-241	ENST00000619564	RIT2	Q99578	217 aa		21.31	■■□□□ 1
FGFR1-241	ENST00000619564	SETSIP	P0DME0	302 aa		21.31	■■□□□ 1
FGFR1-241	ENST00000619564	PCSK1	P29120	753 aa		21.31	■■□□□ 1
FGFR1-241	ENST00000619564	TMEM39B	Q9GZU3	492 aa		21.31	■■□□□ 1
FGFR1-241	ENST00000619564	KDM4C	Q9H3R0	1056 aa		21.31	■■□□□ 1
FGFR1-241	ENST00000619564	SMYD3	Q9H7B4	428 aa		21.31	■■□□□ 1
FGFR1-241	ENST00000619564	MED14	O60244	1454 aa		21.3	■■□□□ 1
FGFR1-241	ENST00000619564	RRN3P2	A6NIE6	340 aa		21.3	■■□□□ 1
FGFR1-241	ENST00000619564	CELF2	O95319	508 aa	Known RBP	21.3	■■□□□ 1
FGFR1-241	ENST00000619564	EIF2A	Q9BY44	585 aa	Known RBP	21.3	■■□□□ 1
FGFR1-241	ENST00000619564	FRMD3	A2A2Y4	597 aa		21.3	■■□□□ 1
FGFR1-241	ENST00000619564	SYNDIG1L	A6NDD5	238 aa		21.3	■■□□□ 1
FGFR1-241	ENST00000619564	ARFIP2	P53365	341 aa		21.3	■■□□□ 1
FGFR1-241	ENST00000619564	MFN1	Q8IWA4	741 aa		21.3	■■□□□ 1
FGFR1-241	ENST00000619564	ESYT3	A0FGR9	886 aa		21.3	■■□□□ 1
FGFR1-241	ENST00000619564	PPP2R2A	P63151	447 aa		21.3	■■□□□ 1
FGFR1-241	ENST00000619564	NCAPH	Q15003	741 aa		21.3	■■□□□ 1
FGFR1-241	ENST00000619564	EFCAB12	Q6NXP0	572 aa		21.3	■■□□□ 1
FGFR1-241	ENST00000619564	AGBL3	Q8NEM8	1001 aa		21.3	■■□□□ 1
FGFR1-241	ENST00000619564	HPS3	Q969F9	1004 aa		21.3	■■□□□ 1
FGFR1-241	ENST00000619564	MAP4	P27816	1152 aa	Known RBP	21.3	■■□□□ 1
FGFR1-241	ENST00000619564	METTL16	Q86W50	562 aa	Known RBP	21.3	■■□□□ 1
FGFR1-241	ENST00000619564	SCHIP1	Q9P0W5	487 aa	Predicted RBP	21.3	■■□□□ 1
FGFR1-241	ENST00000619564	LIMA1	Q9UHB6	759 aa	Known RBP	21.3	■■□□□ 1
FGFR1-241	ENST00000619564	USP42	Q9H9J4	1324 aa	Known RBP	21.3	■■□□□ 1
FGFR1-241	ENST00000619564	SESN2	P58004	480 aa	Predicted RBP	21.29	■■□□□ 1
FGFR1-241	ENST00000619564	PLA2G4F	Q68DD2	849 aa		21.29	■■□□□ 1
FGFR1-241	ENST00000619564	SCFD1	Q8WVM8	642 aa		21.29	■■□□□ 1
FGFR1-241	ENST00000619564	CPA5	Q8WXQ8	436 aa		21.29	■■□□□ 1
FGFR1-241	ENST00000619564	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	21.29	■■□□□ 1
FGFR1-241	ENST00000619564	HIST1H2AD	P20671	130 aa		21.29	■■□□□ 1
FGFR1-241	ENST00000619564	FAM117B	Q6P1L5	589 aa		21.29	■■□□□ 1
FGFR1-241	ENST00000619564	SYDE1	Q6ZW31	735 aa	Predicted RBP	21.29	■■□□□ 1
FGFR1-241	ENST00000619564	FBXO33	Q7Z6M2	555 aa		21.29	■■□□□ 1
FGFR1-241	ENST00000619564	PGBD3	Q8N328	593 aa		21.29	■■□□□ 1
FGFR1-241	ENST00000619564	HIST1H2AH	Q96KK5	128 aa		21.29	■■□□□ 1
FGFR1-241	ENST00000619564	HIST1H2AJ	Q99878	128 aa		21.29	■■□□□ 1
FGFR1-241	ENST00000619564	H2AFJ	Q9BTM1	129 aa		21.29	■■□□□ 1
FGFR1-241	ENST00000619564	CNTNAP4	Q9C0A0	1308 aa		21.29	■■□□□ 1
FGFR1-241	ENST00000619564	ZNF609	O15014	1411 aa		21.29	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms