RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 ABCB6Q9NP58 842 aa20.47■□□□□ 0.87
PSPC1-206ENST00000619300 RNF216Q9NWF9 866 aaPredicted RBP20.47■□□□□ 0.87
PSPC1-206ENST00000619300 KCNK3O14649 394 aa20.46■□□□□ 0.87
PSPC1-206ENST00000619300 BUB1BO60566 1050 aaPredicted RBP20.46■□□□□ 0.87
PSPC1-206ENST00000619300 HOXD8P13378 290 aaPredicted RBP20.46■□□□□ 0.87
PSPC1-206ENST00000619300 MCM3P25205 808 aa20.46■□□□□ 0.87
PSPC1-206ENST00000619300 PHKA2P46019 1235 aa20.46■□□□□ 0.87
PSPC1-206ENST00000619300 ZNF157P51786 506 aaPredicted RBP20.46■□□□□ 0.87
PSPC1-206ENST00000619300 SURF1Q15526 300 aa20.46■□□□□ 0.87
PSPC1-206ENST00000619300 SPOPLQ6IQ16 392 aa20.46■□□□□ 0.87
PSPC1-206ENST00000619300 CCDC70Q6NSX1 233 aa20.46■□□□□ 0.87
PSPC1-206ENST00000619300 OR6J1Q8NGC5 347 aa20.46■□□□□ 0.87
PSPC1-206ENST00000619300 IFT122Q9HBG6 1241 aa20.46■□□□□ 0.87
PSPC1-206ENST00000619300 APOBEC3GQ9HC16 384 aaKnown RBP20.46■□□□□ 0.87
PSPC1-206ENST00000619300 FAM170AA1A519 330 aa20.46■□□□□ 0.87
PSPC1-206ENST00000619300 B4GALT5O43286 388 aa20.46■□□□□ 0.87
PSPC1-206ENST00000619300 TMOD1P28289 359 aa20.46■□□□□ 0.87
PSPC1-206ENST00000619300 HADHBP55084 474 aaKnown RBP20.46■□□□□ 0.87
PSPC1-206ENST00000619300 CUL2Q13617 745 aa20.46■□□□□ 0.87
PSPC1-206ENST00000619300 NCOA4Q13772 614 aa20.46■□□□□ 0.87
PSPC1-206ENST00000619300 LONRF2Q1L5Z9 754 aa20.46■□□□□ 0.87
PSPC1-206ENST00000619300 MORN1Q5T089 497 aa20.46■□□□□ 0.87
PSPC1-206ENST00000619300 RASAL3Q86YV0 1011 aa20.46■□□□□ 0.87
PSPC1-206ENST00000619300 PRMT7Q9NVM4 692 aaPredicted RBP20.46■□□□□ 0.87
PSPC1-206ENST00000619300 AMFRQ9UKV5 643 aa20.46■□□□□ 0.87
PSPC1-206ENST00000619300 TNFSF13BQ9Y275 285 aa20.46■□□□□ 0.87
PSPC1-206ENST00000619300 MANSC4A6NHS7 340 aaPredicted RBP20.45■□□□□ 0.86
PSPC1-206ENST00000619300 IGF2BP3O00425 579 aaKnown RBP eCLIP20.45■□□□□ 0.86
PSPC1-206ENST00000619300 MMP3P08254 477 aa20.45■□□□□ 0.86
PSPC1-206ENST00000619300 IQCF3P0C7M6 154 aa20.45■□□□□ 0.86
PSPC1-206ENST00000619300 BPIFB4P59827 614 aa20.45■□□□□ 0.86
PSPC1-206ENST00000619300 DGKDQ16760 1214 aa20.45■□□□□ 0.86
PSPC1-206ENST00000619300 TMEM132AQ24JP5 1023 aa20.45■□□□□ 0.86
PSPC1-206ENST00000619300 BEND6Q5SZJ8 279 aaPredicted RBP20.45■□□□□ 0.86
PSPC1-206ENST00000619300 MTHFD1LQ6UB35 978 aa20.45■□□□□ 0.86
PSPC1-206ENST00000619300 ZCCHC17Q9NP64 241 aaKnown RBP20.45■□□□□ 0.86
PSPC1-206ENST00000619300 COG5Q9UP83 839 aa20.45■□□□□ 0.86
PSPC1-206ENST00000619300 PCDHB2Q9Y5E7 798 aa20.45■□□□□ 0.86
PSPC1-206ENST00000619300 TBC1D8O95759 1140 aa20.44■□□□□ 0.86
PSPC1-206ENST00000619300 ACO1P21399 889 aaKnown RBP20.44■□□□□ 0.86
PSPC1-206ENST00000619300 FAM187BQ17R55 369 aa20.44■□□□□ 0.86
PSPC1-206ENST00000619300 DUOXA2Q1HG44 320 aa20.44■□□□□ 0.86
PSPC1-206ENST00000619300 ZNF568Q3ZCX4 644 aa20.44■□□□□ 0.86
PSPC1-206ENST00000619300 CHADLQ6NUI6 762 aa20.44■□□□□ 0.86
PSPC1-206ENST00000619300 IFNLR1Q8IU57 520 aaPredicted RBP20.44■□□□□ 0.86
PSPC1-206ENST00000619300 FAM212AQ96EL1 285 aa20.44■□□□□ 0.86
PSPC1-206ENST00000619300 HES6Q96HZ4 224 aa20.44■□□□□ 0.86
PSPC1-206ENST00000619300 SELENOOQ9BVL4 669 aa20.44■□□□□ 0.86
PSPC1-206ENST00000619300 AKT3Q9Y243 479 aa20.44■□□□□ 0.86
PSPC1-206ENST00000619300 A0A087WZ62 844 aa20.44■□□□□ 0.86
PSPC1-206ENST00000619300 CLTAP09496 248 aa20.44■□□□□ 0.86
PSPC1-206ENST00000619300 TBXAS1P24557 533 aaPredicted RBP20.44■□□□□ 0.86
PSPC1-206ENST00000619300 TNFAIP2Q03169 654 aa20.44■□□□□ 0.86
PSPC1-206ENST00000619300 MAP2K5Q13163 448 aa20.44■□□□□ 0.86
PSPC1-206ENST00000619300 PTPROQ16827 1216 aa20.44■□□□□ 0.86
PSPC1-206ENST00000619300 EEF1DP3Q658K8 133 aa20.44■□□□□ 0.86
PSPC1-206ENST00000619300 THNSL1Q8IYQ7 743 aa20.44■□□□□ 0.86
PSPC1-206ENST00000619300 FDXACB1Q9BRP7 624 aaPredicted RBP20.44■□□□□ 0.86
PSPC1-206ENST00000619300 LRRC1Q9BTT6 524 aa20.44■□□□□ 0.86
PSPC1-206ENST00000619300 RBM12Q9NTZ6 932 aaKnown RBP20.44■□□□□ 0.86
PSPC1-206ENST00000619300 CTTNBP2NLQ9P2B4 639 aa20.44■□□□□ 0.86
PSPC1-206ENST00000619300 NUB1Q9Y5A7 615 aa20.44■□□□□ 0.86
PSPC1-206ENST00000619300 CST3P01034 146 aaPredicted RBP20.43■□□□□ 0.86
PSPC1-206ENST00000619300 NOP14P78316 857 aaKnown RBP20.43■□□□□ 0.86
PSPC1-206ENST00000619300 ZNF677Q86XU0 584 aa20.43■□□□□ 0.86
PSPC1-206ENST00000619300 FUT8Q9BYC5 575 aa20.43■□□□□ 0.86
PSPC1-206ENST00000619300 ADCY6O43306 1168 aa20.43■□□□□ 0.86
PSPC1-206ENST00000619300 PPFIA1Q13136 1202 aa20.43■□□□□ 0.86
PSPC1-206ENST00000619300 TAF1CQ15572 869 aaPredicted RBP20.43■□□□□ 0.86
PSPC1-206ENST00000619300 GRIK4Q16099 956 aa20.43■□□□□ 0.86
PSPC1-206ENST00000619300 ACAD10Q6JQN1 1059 aa20.43■□□□□ 0.86
PSPC1-206ENST00000619300 CDR2LQ86X02 465 aaPredicted RBP20.43■□□□□ 0.86
PSPC1-206ENST00000619300 ACTRT1Q8TDG2 376 aa20.43■□□□□ 0.86
PSPC1-206ENST00000619300 IMPG2Q9BZV3 1241 aa20.43■□□□□ 0.86
PSPC1-206ENST00000619300 MTMR12Q9C0I1 747 aa20.43■□□□□ 0.86
PSPC1-206ENST00000619300 ECM2O94769 699 aaPredicted RBP20.42■□□□□ 0.86
PSPC1-206ENST00000619300 ASS1P00966 412 aaKnown RBP20.42■□□□□ 0.86
PSPC1-206ENST00000619300 VTNP04004 478 aa20.42■□□□□ 0.86
PSPC1-206ENST00000619300 RNASE9P60153 205 aaKnown RBP20.42■□□□□ 0.86
PSPC1-206ENST00000619300 CBX1P83916 185 aa20.42■□□□□ 0.86
PSPC1-206ENST00000619300 IRF5Q13568 498 aa20.42■□□□□ 0.86
PSPC1-206ENST00000619300 CLEC16AQ2KHT3 1053 aa20.42■□□□□ 0.86
PSPC1-206ENST00000619300 PRAMEF19Q5SWL8 479 aa20.42■□□□□ 0.86
PSPC1-206ENST00000619300 MARCH8Q5T0T0 291 aa20.42■□□□□ 0.86
PSPC1-206ENST00000619300 USP38Q8NB14 1042 aa20.42■□□□□ 0.86
PSPC1-206ENST00000619300 CDT1Q9H211 546 aa20.42■□□□□ 0.86
PSPC1-206ENST00000619300 L1RE1Q9UN81 338 aa20.42■□□□□ 0.86
PSPC1-206ENST00000619300 CNTN6Q9UQ52 1028 aa20.42■□□□□ 0.86
PSPC1-206ENST00000619300 PCDHB4Q9Y5E5 795 aa20.42■□□□□ 0.86
PSPC1-206ENST00000619300 CEP104O60308 925 aa20.41■□□□□ 0.86
PSPC1-206ENST00000619300 B4GALT4O60513 344 aa20.41■□□□□ 0.86
PSPC1-206ENST00000619300 CSDE1O75534 798 aaKnown RBP20.41■□□□□ 0.86
PSPC1-206ENST00000619300 SASH3O75995 380 aa20.41■□□□□ 0.86
PSPC1-206ENST00000619300 MTA2O94776 668 aa20.41■□□□□ 0.86
PSPC1-206ENST00000619300 CALCAP01258 141 aa20.41■□□□□ 0.86
PSPC1-206ENST00000619300 CYP1A2P05177 515 aa20.41■□□□□ 0.86
PSPC1-206ENST00000619300 HOXC6P09630 235 aa20.41■□□□□ 0.86
PSPC1-206ENST00000619300 OSTNP61366 133 aa20.41■□□□□ 0.86
PSPC1-206ENST00000619300 AMHR2Q16671 573 aa20.41■□□□□ 0.86
PSPC1-206ENST00000619300 GLE1Q53GS7 698 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms