RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 OR1G1P47890 313 aa9□□□□□ -0.97
NEK3-209ENST00000618856 YARSP54577 528 aaKnown RBP9□□□□□ -0.97
NEK3-209ENST00000618856 SNRPFP62306 86 aaKnown RBP9□□□□□ -0.97
NEK3-209ENST00000618856 ASIC1P78348 528 aa9□□□□□ -0.97
NEK3-209ENST00000618856 MRPS5P82675 430 aaKnown RBP9□□□□□ -0.97
NEK3-209ENST00000618856 DSG1Q02413 1049 aa9□□□□□ -0.97
NEK3-209ENST00000618856 DLX2Q07687 328 aaPredicted RBP9□□□□□ -0.97
NEK3-209ENST00000618856 DPYDQ12882 1025 aa9□□□□□ -0.97
NEK3-209ENST00000618856 PSMD2Q13200 908 aa9□□□□□ -0.97
NEK3-209ENST00000618856 SEZ6Q53EL9 994 aa9□□□□□ -0.97
NEK3-209ENST00000618856 FAM26FQ5R3K3 315 aa9□□□□□ -0.97
NEK3-209ENST00000618856 DCLRE1AQ6PJP8 1040 aa9□□□□□ -0.97
NEK3-209ENST00000618856 KRBA2Q6ZNG9 492 aa9□□□□□ -0.97
NEK3-209ENST00000618856 TMC7Q7Z402 723 aa9□□□□□ -0.97
NEK3-209ENST00000618856 CD302Q8IX05 232 aa9□□□□□ -0.97
NEK3-209ENST00000618856 ELOA2Q8IYF1 753 aaPredicted RBP9□□□□□ -0.97
NEK3-209ENST00000618856 GRAMD1CQ8IYS0 662 aa9□□□□□ -0.97
NEK3-209ENST00000618856 CEP57L1Q8IYX8 460 aa9□□□□□ -0.97
NEK3-209ENST00000618856 VPS52Q8N1B4 723 aa9□□□□□ -0.97
NEK3-209ENST00000618856 MICALL1Q8N3F8 863 aa9□□□□□ -0.97
NEK3-209ENST00000618856 GADD45GIP1Q8TAE8 222 aaPredicted RBP9□□□□□ -0.97
NEK3-209ENST00000618856 SLC22A17Q8WUG5 538 aa9□□□□□ -0.97
NEK3-209ENST00000618856 HPS3Q969F9 1004 aa9□□□□□ -0.97
NEK3-209ENST00000618856 PPP2R3CQ969Q6 453 aa9□□□□□ -0.97
NEK3-209ENST00000618856 RPS6KC1Q96S38 1066 aa9□□□□□ -0.97
NEK3-209ENST00000618856 MSTO1Q9BUK6 570 aa9□□□□□ -0.97
NEK3-209ENST00000618856 GPR62Q9BZJ7 368 aa9□□□□□ -0.97
NEK3-209ENST00000618856 BLZF1Q9H2G9 400 aa9□□□□□ -0.97
NEK3-209ENST00000618856 SLC38A7Q9NVC3 462 aa9□□□□□ -0.97
NEK3-209ENST00000618856 TBC1D7Q9P0N9 293 aa9□□□□□ -0.97
NEK3-209ENST00000618856 EXOC7Q9UPT5 735 aa9□□□□□ -0.97
NEK3-209ENST00000618856 PRG3Q9Y2Y8 225 aaPredicted RBP9□□□□□ -0.97
NEK3-209ENST00000618856 DERAQ9Y315 318 aa9□□□□□ -0.97
NEK3-209ENST00000618856 TTC28Q96AY4 2481 aa9□□□□□ -0.97
NEK3-209ENST00000618856 CUL9Q8IWT3 2517 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 TRIP11Q15643 1979 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 C5orf42Q9H799 3197 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 CITO14578 2027 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 LACTBL1A8MY62 500 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 KIAA0391O15091 583 aaKnown RBP8.99□□□□□ -0.97
NEK3-209ENST00000618856 TGFB1I1O43294 461 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 CLASP2O75122 1294 aaKnown RBP8.99□□□□□ -0.97
NEK3-209ENST00000618856 PRPF6O94906 941 aaKnown RBP8.99□□□□□ -0.97
NEK3-209ENST00000618856 ZNF202O95125 648 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 CXCL14O95715 111 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 CXCL8P10145 99 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 FGFR3P22607 806 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 AFMP43652 599 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 NRIP1P48552 1158 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 AARSP49588 968 aaKnown RBP eCLIP8.99□□□□□ -0.97
NEK3-209ENST00000618856 CLCNKBP51801 687 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 OSTNP61366 133 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 TFF2Q03403 129 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 STK4Q13043 487 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 POSTNQ15063 836 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 AAK1Q2M2I8 961 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 TJAP1Q5JTD0 557 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 GLRA4Q5JXX5 417 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 SPATA1Q5VX52 437 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 PLPP4Q5VZY2 271 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 FUT10Q6P4F1 479 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 CLEC17AQ6ZS10 378 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 C12orf56Q8IXR9 622 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 FSIP1Q8NA03 581 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 KIAA0895Q8NCT3 520 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 C3orf58Q8NDZ4 430 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 SPATA20Q8TB22 786 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 BICD1Q96G01 975 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 DDX27Q96GQ7 796 aaKnown RBP8.99□□□□□ -0.97
NEK3-209ENST00000618856 FBXL18Q96ME1 805 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 TIGD1Q96MW7 591 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 KLHL5Q96PQ7 755 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 ASB7Q9H672 318 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 TLE6Q9H808 572 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 ENTPD7Q9NQZ7 604 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 CHMP5Q9NZZ3 219 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 FNIP2Q9P278 1114 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 CACNG4Q9UBN1 327 aa8.99□□□□□ -0.97
NEK3-209ENST00000618856 AGO2Q9UKV8 859 aaKnown RBP8.99□□□□□ -0.97
NEK3-209ENST00000618856 ANK1P16157 1881 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 GRXCR2A6NFK2 248 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 CASTOR2A6NHX0 329 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 PER2O15055 1255 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 TBC1D4O60343 1298 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 TADA2AO75478 443 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 RHOBTB3O94955 611 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 CNPP09543 421 aaKnown RBP8.98□□□□□ -0.97
NEK3-209ENST00000618856 HARSP12081 509 aaKnown RBP8.98□□□□□ -0.97
NEK3-209ENST00000618856 GLUD2P49448 558 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 ACOT2P49753 483 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 MCCD1P59942 119 aaPredicted RBP8.98□□□□□ -0.97
NEK3-209ENST00000618856 FAM160A1Q05DH4 1040 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 ELAVL2Q12926 359 aaKnown RBP8.98□□□□□ -0.97
NEK3-209ENST00000618856 MRPL58Q14197 206 aaKnown RBP8.98□□□□□ -0.97
NEK3-209ENST00000618856 KCNB1Q14721 858 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 USP41Q3LFD5 358 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 PUS10Q3MIT2 529 aaKnown RBP8.98□□□□□ -0.97
NEK3-209ENST00000618856 KMT5BQ4FZB7 885 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 RTP2Q5QGT7 225 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 KANK3Q6NY19 840 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms