RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 ADCY6O43306 1168 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 CNOT3O75175 753 aaKnown RBP15.76■□□□□ 0.11
COL5A1-208ENST00000618395 WARSP23381 471 aaKnown RBP15.76■□□□□ 0.11
COL5A1-208ENST00000618395 BRDTQ58F21 947 aaPredicted RBP15.76■□□□□ 0.11
COL5A1-208ENST00000618395 ODR4Q5SWX8 454 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 ERICH5Q6P6B1 374 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 CCDC33Q8N5R6 958 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 UXS1Q8NBZ7 420 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 C17orf80Q9BSJ5 609 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 MLXIPQ9HAP2 919 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 DENND2AQ9ULE3 1009 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 FCGR1AP12314 374 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 TTKP33981 857 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 MZT2BQ6NZ67 158 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 CLVS1Q8IUQ0 354 aaPredicted RBP15.76■□□□□ 0.11
COL5A1-208ENST00000618395 SYTL5Q8TDW5 730 aaPredicted RBP15.76■□□□□ 0.11
COL5A1-208ENST00000618395 POLR1BQ9H9Y6 1135 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 SELENONQ9NZV5 590 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 PIK3C2GO75747 1445 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 AREL1O15033 823 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 FKBP9O95302 570 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 LONRF1Q17RB8 773 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 WASHC2DQ5SRD0 308 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 KIAA0408Q6ZU52 694 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 FKBP9P1Q75LS8 142 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 EGFL6Q8IUX8 553 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 LINC00301Q8NCQ3 95 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 RHOBTB2Q9BYZ6 727 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 CTDSPL2Q05D32 466 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 CBX3Q13185 183 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 C6orf10Q5SRN2 563 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 MEI1Q5TIA1 1274 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 CYFIP1Q7L576 1253 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 GRPEL2Q8TAA5 225 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 S100ZQ8WXG8 99 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 ANKRD36BP1Q96IX9 119 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 BHMT2Q9H2M3 363 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 WDR37Q9Y2I8 494 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 PPP2R3BQ9Y5P8 575 aa15.76■□□□□ 0.11
COL5A1-208ENST00000618395 ALOX5P09917 674 aa15.75■□□□□ 0.11
COL5A1-208ENST00000618395 TGFBR2P37173 567 aa15.75■□□□□ 0.11
COL5A1-208ENST00000618395 NFIL3Q16649 462 aa15.75■□□□□ 0.11
COL5A1-208ENST00000618395 ZNF57Q68EA5 555 aaPredicted RBP15.75■□□□□ 0.11
COL5A1-208ENST00000618395 KRT36O76013 467 aa15.75■□□□□ 0.11
COL5A1-208ENST00000618395 ZNF23P17027 643 aa15.75■□□□□ 0.11
COL5A1-208ENST00000618395 CASP4P49662 377 aa15.75■□□□□ 0.11
COL5A1-208ENST00000618395 PKN2Q16513 984 aaKnown RBP15.75■□□□□ 0.11
COL5A1-208ENST00000618395 RNFT2Q96EX2 444 aa15.75■□□□□ 0.11
COL5A1-208ENST00000618395 USP44Q9H0E7 712 aa15.75■□□□□ 0.11
COL5A1-208ENST00000618395 KLHL8Q9P2G9 620 aaPredicted RBP15.75■□□□□ 0.11
COL5A1-208ENST00000618395 SLC12A6Q9UHW9 1150 aa15.75■□□□□ 0.11
COL5A1-208ENST00000618395 ABL1P00519 1130 aa15.75■□□□□ 0.11
COL5A1-208ENST00000618395 PEX5P50542 639 aa15.75■□□□□ 0.11
COL5A1-208ENST00000618395 BEST2Q8NFU1 509 aa15.75■□□□□ 0.11
COL5A1-208ENST00000618395 APOL6Q9BWW8 343 aa15.75■□□□□ 0.11
COL5A1-208ENST00000618395 VTA1Q9NP79 307 aa15.75■□□□□ 0.11
COL5A1-208ENST00000618395 LIN7AO14910 233 aaPredicted RBP15.75■□□□□ 0.11
COL5A1-208ENST00000618395 MAPKAPK2P49137 400 aa15.75■□□□□ 0.11
COL5A1-208ENST00000618395 SLC34A1Q06495 639 aa15.75■□□□□ 0.11
COL5A1-208ENST00000618395 FAPQ12884 760 aa15.75■□□□□ 0.11
COL5A1-208ENST00000618395 IZUMO3Q5VZ72 239 aa15.75■□□□□ 0.11
COL5A1-208ENST00000618395 TEX13BQ9BXU2 312 aa15.75■□□□□ 0.11
COL5A1-208ENST00000618395 NOD1Q9Y239 953 aa15.75■□□□□ 0.11
COL5A1-208ENST00000618395 CUL4AQ13619 759 aa15.75■□□□□ 0.11
COL5A1-208ENST00000618395 NLRX1Q86UT6 975 aa15.75■□□□□ 0.11
COL5A1-208ENST00000618395 RNF135Q8IUD6 432 aa15.75■□□□□ 0.11
COL5A1-208ENST00000618395 SVOPQ8N4V2 548 aa15.75■□□□□ 0.11
COL5A1-208ENST00000618395 PFDN2Q9UHV9 154 aa15.75■□□□□ 0.11
COL5A1-208ENST00000618395 SPEF1Q9Y4P9 236 aa15.75■□□□□ 0.11
COL5A1-208ENST00000618395 XPAP23025 273 aaPredicted RBP15.74■□□□□ 0.11
COL5A1-208ENST00000618395 BTN3A2P78410 334 aa15.74■□□□□ 0.11
COL5A1-208ENST00000618395 IFNEQ86WN2 208 aa15.74■□□□□ 0.11
COL5A1-208ENST00000618395 FNIP1Q8TF40 1166 aa15.74■□□□□ 0.11
COL5A1-208ENST00000618395 OTUD5Q96G74 571 aa15.74■□□□□ 0.11
COL5A1-208ENST00000618395 CNPY3Q9BT09 278 aa15.74■□□□□ 0.11
COL5A1-208ENST00000618395 PLCL2Q9UPR0 1127 aa15.74■□□□□ 0.11
COL5A1-208ENST00000618395 CCDC189A1A4V9 331 aa15.74■□□□□ 0.11
COL5A1-208ENST00000618395 C5orf58C9J3I9 102 aa15.74■□□□□ 0.11
COL5A1-208ENST00000618395 PLA2G4AP47712 749 aa15.74■□□□□ 0.11
COL5A1-208ENST00000618395 ITGA1P56199 1179 aa15.74■□□□□ 0.11
COL5A1-208ENST00000618395 RORBQ92753 470 aa15.74■□□□□ 0.11
COL5A1-208ENST00000618395 E5RI56 91 aa15.74■□□□□ 0.11
COL5A1-208ENST00000618395 FSBPO95073 299 aa15.74■□□□□ 0.11
COL5A1-208ENST00000618395 MAGEB18Q96M61 343 aa15.74■□□□□ 0.11
COL5A1-208ENST00000618395 VAV3Q9UKW4 847 aa15.74■□□□□ 0.11
COL5A1-208ENST00000618395 INSRP06213 1382 aa15.74■□□□□ 0.11
COL5A1-208ENST00000618395 TRAF2Q12933 501 aa15.74■□□□□ 0.11
COL5A1-208ENST00000618395 CASS4Q9NQ75 786 aa15.74■□□□□ 0.11
COL5A1-208ENST00000618395 CTNNAL1Q9UBT7 734 aa15.74■□□□□ 0.11
COL5A1-208ENST00000618395 HNRNPDLO14979 420 aaKnown RBP15.74■□□□□ 0.11
COL5A1-208ENST00000618395 HPS1Q92902 700 aa15.74■□□□□ 0.11
COL5A1-208ENST00000618395 TLR7Q9NYK1 1049 aaKnown RBP15.74■□□□□ 0.11
COL5A1-208ENST00000618395 A0A087WXM4 84 aa15.74■□□□□ 0.11
COL5A1-208ENST00000618395 GRAMD1CQ8IYS0 662 aa15.74■□□□□ 0.11
COL5A1-208ENST00000618395 PROM2Q8N271 834 aa15.74■□□□□ 0.11
COL5A1-208ENST00000618395 DGCR14Q96DF8 476 aaKnown RBP15.74■□□□□ 0.11
COL5A1-208ENST00000618395 ZFP42Q96MM3 310 aa15.74■□□□□ 0.11
COL5A1-208ENST00000618395 MAST3O60307 1309 aa15.74■□□□□ 0.11
COL5A1-208ENST00000618395 CALB1P05937 261 aa15.74■□□□□ 0.11
COL5A1-208ENST00000618395 CCNE1P24864 410 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms