RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 SMAD2Q15796 467 aaKnown RBP27.16■■□□□ 1.94
PMS1-220ENST00000618056 PPFIBP1Q86W92 1011 aa27.16■■□□□ 1.94
PMS1-220ENST00000618056 NECAB3Q96P71 396 aaPredicted RBP27.16■■□□□ 1.94
PMS1-220ENST00000618056 EMILIN2Q9BXX0 1053 aa27.16■■□□□ 1.94
PMS1-220ENST00000618056 TBC1D7Q9P0N9 293 aa27.16■■□□□ 1.94
PMS1-220ENST00000618056 CNPP09543 421 aaKnown RBP27.15■■□□□ 1.94
PMS1-220ENST00000618056 CMA1P23946 247 aa27.15■■□□□ 1.94
PMS1-220ENST00000618056 ANP32AP39687 249 aaKnown RBP27.15■■□□□ 1.94
PMS1-220ENST00000618056 UPP1Q16831 310 aa27.15■■□□□ 1.94
PMS1-220ENST00000618056 SLFN12LQ6IEE8 588 aa27.15■■□□□ 1.94
PMS1-220ENST00000618056 ANKRD54Q6NXT1 300 aa27.15■■□□□ 1.94
PMS1-220ENST00000618056 LLGL2Q6P1M3 1020 aa27.15■■□□□ 1.94
PMS1-220ENST00000618056 KLHL5Q96PQ7 755 aa27.15■■□□□ 1.94
PMS1-220ENST00000618056 C7orf25Q9BPX7 421 aa27.15■■□□□ 1.94
PMS1-220ENST00000618056 PCDHB13Q9Y5F0 798 aa27.15■■□□□ 1.94
PMS1-220ENST00000618056 PLXNA3P51805 1871 aa27.15■■□□□ 1.94
PMS1-220ENST00000618056 TTC26A0AVF1 554 aa27.14■■□□□ 1.94
PMS1-220ENST00000618056 ANKRD63C9JTQ0 380 aa27.14■■□□□ 1.94
PMS1-220ENST00000618056 CXCL8P10145 99 aa27.14■■□□□ 1.94
PMS1-220ENST00000618056 HOXB8P17481 243 aaPredicted RBP27.14■■□□□ 1.94
PMS1-220ENST00000618056 CLCNKBP51801 687 aa27.14■■□□□ 1.94
PMS1-220ENST00000618056 SOX4Q06945 474 aaPredicted RBP27.14■■□□□ 1.94
PMS1-220ENST00000618056 ELAVL2Q12926 359 aaKnown RBP27.14■■□□□ 1.94
PMS1-220ENST00000618056 L1TD1Q5T7N2 865 aaKnown RBP27.14■■□□□ 1.94
PMS1-220ENST00000618056 KIAA1841Q6NSI8 718 aa27.14■■□□□ 1.94
PMS1-220ENST00000618056 DCLRE1AQ6PJP8 1040 aa27.14■■□□□ 1.94
PMS1-220ENST00000618056 SLC22A17Q8WUG5 538 aa27.14■■□□□ 1.94
PMS1-220ENST00000618056 DDX27Q96GQ7 796 aaKnown RBP27.14■■□□□ 1.94
PMS1-220ENST00000618056 MSTO1Q9BUK6 570 aa27.14■■□□□ 1.94
PMS1-220ENST00000618056 RXFP1Q9HBX9 757 aa27.14■■□□□ 1.94
PMS1-220ENST00000618056 EXOC7Q9UPT5 735 aa27.14■■□□□ 1.94
PMS1-220ENST00000618056 C2CD2LO14523 706 aa27.13■■□□□ 1.93
PMS1-220ENST00000618056 GCNT3O95395 438 aa27.13■■□□□ 1.93
PMS1-220ENST00000618056 TNFSF9P41273 254 aa27.13■■□□□ 1.93
PMS1-220ENST00000618056 CASP5P51878 434 aa27.13■■□□□ 1.93
PMS1-220ENST00000618056 NUCB2P80303 420 aa27.13■■□□□ 1.93
PMS1-220ENST00000618056 SYCE2Q6PIF2 218 aa27.13■■□□□ 1.93
PMS1-220ENST00000618056 HASPINQ8TF76 798 aa27.13■■□□□ 1.93
PMS1-220ENST00000618056 ACCSQ96QU6 501 aa27.13■■□□□ 1.93
PMS1-220ENST00000618056 GOLGA2P5Q9HBQ8 144 aa27.13■■□□□ 1.93
PMS1-220ENST00000618056 PRKAG3Q9UGI9 489 aa27.13■■□□□ 1.93
PMS1-220ENST00000618056 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.13■■□□□ 1.93
PMS1-220ENST00000618056 ADRB2P07550 413 aa27.13■■□□□ 1.93
PMS1-220ENST00000618056 KCNA1Q09470 495 aa27.13■■□□□ 1.93
PMS1-220ENST00000618056 FGFBP2Q9BYJ0 223 aa27.13■■□□□ 1.93
PMS1-220ENST00000618056 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.13■■□□□ 1.93
PMS1-220ENST00000618056 TNFRSF10AO00220 468 aa27.12■■□□□ 1.93
PMS1-220ENST00000618056 B3GAT3O94766 335 aa27.12■■□□□ 1.93
PMS1-220ENST00000618056 MYBP10242 640 aa27.12■■□□□ 1.93
PMS1-220ENST00000618056 KLRC2P26717 231 aa27.12■■□□□ 1.93
PMS1-220ENST00000618056 RPL9P32969 192 aaKnown RBP27.12■■□□□ 1.93
PMS1-220ENST00000618056 ASIC1P78348 528 aa27.12■■□□□ 1.93
PMS1-220ENST00000618056 POSTNQ15063 836 aa27.12■■□□□ 1.93
PMS1-220ENST00000618056 ENOX2Q16206 610 aaKnown RBP27.12■■□□□ 1.93
PMS1-220ENST00000618056 ZBTB41Q5SVQ8 909 aa27.12■■□□□ 1.93
PMS1-220ENST00000618056 CD300LGQ6UXG3 332 aa27.12■■□□□ 1.93
PMS1-220ENST00000618056 B3GALT6Q96L58 329 aa27.12■■□□□ 1.93
PMS1-220ENST00000618056 TSPAN18Q96SJ8 248 aa27.12■■□□□ 1.93
PMS1-220ENST00000618056 S1PR5Q9H228 398 aa27.12■■□□□ 1.93
PMS1-220ENST00000618056 RPF1Q9H9Y2 349 aaKnown RBP27.12■■□□□ 1.93
PMS1-220ENST00000618056 DZANK1Q9NVP4 752 aa27.12■■□□□ 1.93
PMS1-220ENST00000618056 CPSF3Q9UKF6 684 aaKnown RBP27.12■■□□□ 1.93
PMS1-220ENST00000618056 HPSEQ9Y251 543 aa27.12■■□□□ 1.93
PMS1-220ENST00000618056 TISP43B9A030 160 aa27.11■■□□□ 1.93
PMS1-220ENST00000618056 TEX28O15482 410 aa27.11■■□□□ 1.93
PMS1-220ENST00000618056 ADH1AP07327 375 aa27.11■■□□□ 1.93
PMS1-220ENST00000618056 SLFN14P0C7P3 912 aa27.11■■□□□ 1.93
PMS1-220ENST00000618056 PFKFB1P16118 471 aa27.11■■□□□ 1.93
PMS1-220ENST00000618056 EPCAMP16422 314 aa27.11■■□□□ 1.93
PMS1-220ENST00000618056 CLCN4P51793 760 aa27.11■■□□□ 1.93
PMS1-220ENST00000618056 POU5F1Q01860 360 aaKnown RBP27.11■■□□□ 1.93
PMS1-220ENST00000618056 CREMQ03060 361 aa27.11■■□□□ 1.93
PMS1-220ENST00000618056 PPP2R3AQ06190 1150 aa27.11■■□□□ 1.93
PMS1-220ENST00000618056 TPRNQ4KMQ1 711 aa27.11■■□□□ 1.93
PMS1-220ENST00000618056 RTP2Q5QGT7 225 aa27.11■■□□□ 1.93
PMS1-220ENST00000618056 SUSD6Q92537 303 aa27.11■■□□□ 1.93
PMS1-220ENST00000618056 TTPALQ9BTX7 342 aa27.11■■□□□ 1.93
PMS1-220ENST00000618056 FNIP2Q9P278 1114 aa27.11■■□□□ 1.93
PMS1-220ENST00000618056 USP15Q9Y4E8 981 aaPredicted RBP27.11■■□□□ 1.93
PMS1-220ENST00000618056 FAM237AA0A1B0GTK4 181 aa27.1■■□□□ 1.93
PMS1-220ENST00000618056 A0A1B0GVL5 298 aa27.1■■□□□ 1.93
PMS1-220ENST00000618056 PODXLO00592 558 aa27.1■■□□□ 1.93
PMS1-220ENST00000618056 C1RP00736 705 aa27.1■■□□□ 1.93
PMS1-220ENST00000618056 ADSSP30520 456 aa27.1■■□□□ 1.93
PMS1-220ENST00000618056 FAM171A1Q5VUB5 890 aa27.1■■□□□ 1.93
PMS1-220ENST00000618056 STXBP4Q6ZWJ1 553 aa27.1■■□□□ 1.93
PMS1-220ENST00000618056 CD302Q8IX05 232 aa27.1■■□□□ 1.93
PMS1-220ENST00000618056 CEP57L1Q8IYX8 460 aa27.1■■□□□ 1.93
PMS1-220ENST00000618056 C3orf58Q8NDZ4 430 aa27.1■■□□□ 1.93
PMS1-220ENST00000618056 RIN2Q8WYP3 895 aaPredicted RBP27.1■■□□□ 1.93
PMS1-220ENST00000618056 C18orf25Q96B23 403 aaPredicted RBP27.1■■□□□ 1.93
PMS1-220ENST00000618056 IKZF4Q9H2S9 585 aa27.1■■□□□ 1.93
PMS1-220ENST00000618056 USP25Q9UHP3 1055 aa27.1■■□□□ 1.93
PMS1-220ENST00000618056 AGO2Q9UKV8 859 aaKnown RBP27.1■■□□□ 1.93
PMS1-220ENST00000618056 LACTBL1A8MY62 500 aa27.09■■□□□ 1.93
PMS1-220ENST00000618056 ACTN4O43707 911 aaKnown RBP27.09■■□□□ 1.93
PMS1-220ENST00000618056 IGFBP6P24592 240 aaPredicted RBP27.09■■□□□ 1.93
PMS1-220ENST00000618056 ZBTB6Q15916 424 aa27.09■■□□□ 1.93
PMS1-220ENST00000618056 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.09■■□□□ 1.93
PMS1-220ENST00000618056 UNC13DQ70J99 1090 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms