RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 LGALS2P05162 132 aa18.84■□□□□ 0.61
CNOT3-209ENST00000617930 CCDC172P0C7W6 258 aa18.84■□□□□ 0.61
CNOT3-209ENST00000617930 ZNF286BP0CG31 522 aa18.84■□□□□ 0.61
CNOT3-209ENST00000617930 MFAP3P55082 362 aa18.84■□□□□ 0.61
CNOT3-209ENST00000617930 RNASE9P60153 205 aaKnown RBP18.84■□□□□ 0.61
CNOT3-209ENST00000617930 DUSP28Q4G0W2 176 aa18.84■□□□□ 0.61
CNOT3-209ENST00000617930 NT5DC3Q86UY8 548 aa18.84■□□□□ 0.61
CNOT3-209ENST00000617930 RNF149Q8NC42 400 aa18.84■□□□□ 0.61
CNOT3-209ENST00000617930 FAM71BQ8TC56 605 aa18.84■□□□□ 0.61
CNOT3-209ENST00000617930 APOBEC3GQ9HC16 384 aaKnown RBP18.84■□□□□ 0.61
CNOT3-209ENST00000617930 TSKSQ9UJT2 592 aa18.84■□□□□ 0.61
CNOT3-209ENST00000617930 FAN1Q9Y2M0 1017 aa18.84■□□□□ 0.61
CNOT3-209ENST00000617930 TNPO2O14787 897 aaKnown RBP18.83■□□□□ 0.61
CNOT3-209ENST00000617930 FTLP02792 175 aaPredicted RBP18.83■□□□□ 0.61
CNOT3-209ENST00000617930 CYP11B1P15538 503 aa18.83■□□□□ 0.61
CNOT3-209ENST00000617930 ABCD1P33897 745 aa18.83■□□□□ 0.61
CNOT3-209ENST00000617930 DEFB115Q30KQ5 88 aa18.83■□□□□ 0.61
CNOT3-209ENST00000617930 OLFML2BQ68BL8 750 aa18.83■□□□□ 0.61
CNOT3-209ENST00000617930 EMID1Q96A84 441 aaPredicted RBP18.83■□□□□ 0.61
CNOT3-209ENST00000617930 NT5C1BQ96P26 610 aa18.83■□□□□ 0.61
CNOT3-209ENST00000617930 C16orf70Q9BSU1 422 aa18.83■□□□□ 0.61
CNOT3-209ENST00000617930 KIAA1586Q9HCI6 787 aa18.83■□□□□ 0.61
CNOT3-209ENST00000617930 RBAKQ9NYW8 714 aaPredicted RBP18.83■□□□□ 0.61
CNOT3-209ENST00000617930 TARSL2A2RTX5 802 aaKnown RBP18.83■□□□□ 0.6
CNOT3-209ENST00000617930 HLA-DRAP01903 254 aa18.83■□□□□ 0.6
CNOT3-209ENST00000617930 IQCF3P0C7M6 154 aa18.83■□□□□ 0.6
CNOT3-209ENST00000617930 HARSP12081 509 aaKnown RBP18.83■□□□□ 0.6
CNOT3-209ENST00000617930 TNNI1P19237 187 aa18.83■□□□□ 0.6
CNOT3-209ENST00000617930 LAMC2Q13753 1193 aa18.83■□□□□ 0.6
CNOT3-209ENST00000617930 SLFN12LQ6IEE8 588 aa18.83■□□□□ 0.6
CNOT3-209ENST00000617930 PPTC7Q8NI37 304 aa18.83■□□□□ 0.6
CNOT3-209ENST00000617930 RFFLQ8WZ73 363 aa18.83■□□□□ 0.6
CNOT3-209ENST00000617930 VTI1AQ96AJ9 217 aa18.83■□□□□ 0.6
CNOT3-209ENST00000617930 ACO2Q99798 780 aaKnown RBP18.83■□□□□ 0.6
CNOT3-209ENST00000617930 MINDY3Q9H8M7 445 aa18.83■□□□□ 0.6
CNOT3-209ENST00000617930 GNEQ9Y223 722 aaKnown RBP18.83■□□□□ 0.6
CNOT3-209ENST00000617930 BRCA2P51587 3418 aa18.82■□□□□ 0.6
CNOT3-209ENST00000617930 ANKRD62A6NC57 917 aa18.82■□□□□ 0.6
CNOT3-209ENST00000617930 CLCN3P51790 818 aa18.82■□□□□ 0.6
CNOT3-209ENST00000617930 NOGQ13253 232 aa18.82■□□□□ 0.6
CNOT3-209ENST00000617930 CCDC70Q6NSX1 233 aa18.82■□□□□ 0.6
CNOT3-209ENST00000617930 ZBTB33Q86T24 672 aa18.82■□□□□ 0.6
CNOT3-209ENST00000617930 RHPN2Q8IUC4 686 aa18.82■□□□□ 0.6
CNOT3-209ENST00000617930 FMNL3Q8IVF7 1028 aa18.82■□□□□ 0.6
CNOT3-209ENST00000617930 METTL13Q8N6R0 699 aa18.82■□□□□ 0.6
CNOT3-209ENST00000617930 TRPV1Q8NER1 839 aa18.82■□□□□ 0.6
CNOT3-209ENST00000617930 PPP1R13LQ8WUF5 828 aa18.82■□□□□ 0.6
CNOT3-209ENST00000617930 SMARCAD1Q9H4L7 1026 aa18.82■□□□□ 0.6
CNOT3-209ENST00000617930 SUCLA2Q9P2R7 463 aaPredicted RBP18.82■□□□□ 0.6
CNOT3-209ENST00000617930 KCNK3O14649 394 aa18.81■□□□□ 0.6
CNOT3-209ENST00000617930 B4GALT5O43286 388 aa18.81■□□□□ 0.6
CNOT3-209ENST00000617930 SCP2P22307 547 aa18.81■□□□□ 0.6
CNOT3-209ENST00000617930 SLC7A5Q01650 507 aa18.81■□□□□ 0.6
CNOT3-209ENST00000617930 GCNT1Q02742 428 aa18.81■□□□□ 0.6
CNOT3-209ENST00000617930 RPS6KA1Q15418 735 aa18.81■□□□□ 0.6
CNOT3-209ENST00000617930 ZPBP2Q6X784 338 aa18.81■□□□□ 0.6
CNOT3-209ENST00000617930 GSPT2Q8IYD1 628 aaKnown RBP18.81■□□□□ 0.6
CNOT3-209ENST00000617930 MED4Q9NPJ6 270 aa18.81■□□□□ 0.6
CNOT3-209ENST00000617930 CREBZFQ9NS37 354 aa18.81■□□□□ 0.6
CNOT3-209ENST00000617930 TRPC6Q9Y210 931 aa18.81■□□□□ 0.6
CNOT3-209ENST00000617930 PPME1Q9Y570 386 aa18.81■□□□□ 0.6
CNOT3-209ENST00000617930 EVPLQ92817 2033 aa18.81■□□□□ 0.6
CNOT3-209ENST00000617930 C22orf31O95567 290 aa18.81■□□□□ 0.6
CNOT3-209ENST00000617930 MMP3P08254 477 aa18.81■□□□□ 0.6
CNOT3-209ENST00000617930 LACTBP83111 547 aaPredicted RBP18.81■□□□□ 0.6
CNOT3-209ENST00000617930 ZSCAN26Q16670 478 aa18.81■□□□□ 0.6
CNOT3-209ENST00000617930 CFAP221Q4G0U5 840 aa18.81■□□□□ 0.6
CNOT3-209ENST00000617930 EFCAB12Q6NXP0 572 aa18.81■□□□□ 0.6
CNOT3-209ENST00000617930 DAAM2Q86T65 1068 aa18.81■□□□□ 0.6
CNOT3-209ENST00000617930 USP37Q86T82 979 aa18.81■□□□□ 0.6
CNOT3-209ENST00000617930 CDR2LQ86X02 465 aaPredicted RBP18.81■□□□□ 0.6
CNOT3-209ENST00000617930 CTNNBL1Q8WYA6 563 aaPredicted RBP18.81■□□□□ 0.6
CNOT3-209ENST00000617930 HES6Q96HZ4 224 aa18.81■□□□□ 0.6
CNOT3-209ENST00000617930 FNBP1Q96RU3 617 aa18.81■□□□□ 0.6
CNOT3-209ENST00000617930 APBA2Q99767 749 aa18.81■□□□□ 0.6
CNOT3-209ENST00000617930 VIPAS39Q9H9C1 493 aa18.81■□□□□ 0.6
CNOT3-209ENST00000617930 PTPRHQ9HD43 1115 aa18.81■□□□□ 0.6
CNOT3-209ENST00000617930 CWC15Q9P013 229 aaKnown RBP18.81■□□□□ 0.6
CNOT3-209ENST00000617930 UMODL1Q5DID0 1318 aa18.81■□□□□ 0.6
CNOT3-209ENST00000617930 KIAA0391O15091 583 aaKnown RBP18.8■□□□□ 0.6
CNOT3-209ENST00000617930 CLDN3O15551 220 aa18.8■□□□□ 0.6
CNOT3-209ENST00000617930 HOXD8P13378 290 aaPredicted RBP18.8■□□□□ 0.6
CNOT3-209ENST00000617930 ACO1P21399 889 aaKnown RBP18.8■□□□□ 0.6
CNOT3-209ENST00000617930 RGS2P41220 211 aa18.8■□□□□ 0.6
CNOT3-209ENST00000617930 PSMC4P43686 418 aa18.8■□□□□ 0.6
CNOT3-209ENST00000617930 APLP1P51693 650 aa18.8■□□□□ 0.6
CNOT3-209ENST00000617930 KCTD19Q17RG1 926 aaPredicted RBP18.8■□□□□ 0.6
CNOT3-209ENST00000617930 CCDC181Q5TID7 509 aa18.8■□□□□ 0.6
CNOT3-209ENST00000617930 LEKR1Q6ZMV7 388 aa18.8■□□□□ 0.6
CNOT3-209ENST00000617930 TMEM59LQ9UK28 342 aa18.8■□□□□ 0.6
CNOT3-209ENST00000617930 A0A0U1RQG5 324 aaPredicted RBP18.79■□□□□ 0.6
CNOT3-209ENST00000617930 ATMINO43313 823 aaPredicted RBP18.79■□□□□ 0.6
CNOT3-209ENST00000617930 HBP1O60381 514 aa18.79■□□□□ 0.6
CNOT3-209ENST00000617930 CSDE1O75534 798 aaKnown RBP18.79■□□□□ 0.6
CNOT3-209ENST00000617930 TOM1L1O75674 476 aa18.79■□□□□ 0.6
CNOT3-209ENST00000617930 CST3P01034 146 aaPredicted RBP18.79■□□□□ 0.6
CNOT3-209ENST00000617930 PRKCBP05771 671 aa18.79■□□□□ 0.6
CNOT3-209ENST00000617930 INSRRP14616 1297 aa18.79■□□□□ 0.6
CNOT3-209ENST00000617930 PROZP22891 400 aa18.79■□□□□ 0.6
CNOT3-209ENST00000617930 PAFAH1B1P43034 410 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms