RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 LRMPQ12912 555 aa17.59■□□□□ 0.41
SNAP47-213ENST00000617596 GJB7Q6PEY0 223 aa17.59■□□□□ 0.41
SNAP47-213ENST00000617596 GBP6Q6ZN66 633 aa17.59■□□□□ 0.41
SNAP47-213ENST00000617596 NYAP1Q6ZVC0 841 aa17.59■□□□□ 0.41
SNAP47-213ENST00000617596 TAS1R2Q8TE23 839 aa17.59■□□□□ 0.41
SNAP47-213ENST00000617596 SEMA4DQ92854 862 aa17.59■□□□□ 0.41
SNAP47-213ENST00000617596 IFIH1Q9BYX4 1025 aaKnown RBP17.59■□□□□ 0.41
SNAP47-213ENST00000617596 MTMR12Q9C0I1 747 aa17.59■□□□□ 0.41
SNAP47-213ENST00000617596 PCDHB2Q9Y5E7 798 aa17.59■□□□□ 0.41
SNAP47-213ENST00000617596 RECQL4O94761 1208 aa17.58■□□□□ 0.4
SNAP47-213ENST00000617596 NOL4O94818 638 aa17.58■□□□□ 0.4
SNAP47-213ENST00000617596 TFAMQ00059 246 aaKnown RBP17.58■□□□□ 0.4
SNAP47-213ENST00000617596 BIRC3Q13489 604 aa17.58■□□□□ 0.4
SNAP47-213ENST00000617596 C1orf53Q5VUE5 145 aa17.58■□□□□ 0.4
SNAP47-213ENST00000617596 TDRD10Q5VZ19 366 aaKnown RBP17.58■□□□□ 0.4
SNAP47-213ENST00000617596 KRT39Q6A163 491 aa17.58■□□□□ 0.4
SNAP47-213ENST00000617596 JADE1Q6IE81 842 aa17.58■□□□□ 0.4
SNAP47-213ENST00000617596 DPY19L2P1Q6NXN4 242 aa17.58■□□□□ 0.4
SNAP47-213ENST00000617596 USP37Q86T82 979 aa17.58■□□□□ 0.4
SNAP47-213ENST00000617596 PPFIBP1Q86W92 1011 aa17.58■□□□□ 0.4
SNAP47-213ENST00000617596 LPPQ93052 612 aa17.58■□□□□ 0.4
SNAP47-213ENST00000617596 C16orf45Q96MC5 204 aaPredicted RBP17.58■□□□□ 0.4
SNAP47-213ENST00000617596 TOX2Q96NM4 488 aa17.58■□□□□ 0.4
SNAP47-213ENST00000617596 CGRRF1Q99675 332 aa17.58■□□□□ 0.4
SNAP47-213ENST00000617596 ADAM2Q99965 735 aa17.58■□□□□ 0.4
SNAP47-213ENST00000617596 WNT8AQ9H1J5 351 aa17.58■□□□□ 0.4
SNAP47-213ENST00000617596 TMEM8AQ9HCN3 771 aa17.58■□□□□ 0.4
SNAP47-213ENST00000617596 FAM105AQ9NUU6 356 aa17.58■□□□□ 0.4
SNAP47-213ENST00000617596 IMPACTQ9P2X3 320 aa17.58■□□□□ 0.4
SNAP47-213ENST00000617596 PARP2Q9UGN5 583 aa17.58■□□□□ 0.4
SNAP47-213ENST00000617596 C4BPAP04003 597 aaKnown RBP17.57■□□□□ 0.4
SNAP47-213ENST00000617596 GLRA4Q5JXX5 417 aa17.57■□□□□ 0.4
SNAP47-213ENST00000617596 TRIM65Q6PJ69 517 aa17.57■□□□□ 0.4
SNAP47-213ENST00000617596 LMO3Q8TAP4 145 aa17.57■□□□□ 0.4
SNAP47-213ENST00000617596 PI4K2AQ9BTU6 479 aa17.57■□□□□ 0.4
SNAP47-213ENST00000617596 TTYH3Q9C0H2 523 aa17.57■□□□□ 0.4
SNAP47-213ENST00000617596 INTS2Q9H0H0 1204 aaKnown RBP17.57■□□□□ 0.4
SNAP47-213ENST00000617596 SIX2Q9NPC8 291 aa17.57■□□□□ 0.4
SNAP47-213ENST00000617596 NLRC4Q9NPP4 1024 aa17.57■□□□□ 0.4
SNAP47-213ENST00000617596 TMEM39AQ9NV64 488 aa17.57■□□□□ 0.4
SNAP47-213ENST00000617596 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.57■□□□□ 0.4
SNAP47-213ENST00000617596 PITPNM1O00562 1244 aa17.57■□□□□ 0.4
SNAP47-213ENST00000617596 GUCY2FP51841 1108 aa17.57■□□□□ 0.4
SNAP47-213ENST00000617596 EPC2Q52LR7 807 aa17.57■□□□□ 0.4
SNAP47-213ENST00000617596 APBB1IPQ7Z5R6 666 aaPredicted RBP17.57■□□□□ 0.4
SNAP47-213ENST00000617596 RTN4RL1Q86UN2 441 aaPredicted RBP17.57■□□□□ 0.4
SNAP47-213ENST00000617596 USP38Q8NB14 1042 aa17.57■□□□□ 0.4
SNAP47-213ENST00000617596 RNF169Q8NCN4 708 aa17.57■□□□□ 0.4
SNAP47-213ENST00000617596 NEK11Q8NG66 645 aa17.57■□□□□ 0.4
SNAP47-213ENST00000617596 CACTINQ8WUQ7 758 aaKnown RBP17.57■□□□□ 0.4
SNAP47-213ENST00000617596 ZMAT2Q96NC0 199 aaKnown RBP17.57■□□□□ 0.4
SNAP47-213ENST00000617596 CHST12Q9NRB3 414 aa17.57■□□□□ 0.4
SNAP47-213ENST00000617596 AJAP1Q9UKB5 411 aaPredicted RBP17.57■□□□□ 0.4
SNAP47-213ENST00000617596 POLR2FP61218 127 aaKnown RBP17.56■□□□□ 0.4
SNAP47-213ENST00000617596 DSC3Q14574 896 aa17.56■□□□□ 0.4
SNAP47-213ENST00000617596 BMS1Q14692 1282 aaKnown RBP17.56■□□□□ 0.4
SNAP47-213ENST00000617596 TCTN1Q2MV58 587 aa17.56■□□□□ 0.4
SNAP47-213ENST00000617596 ZACNQ401N2 412 aa17.56■□□□□ 0.4
SNAP47-213ENST00000617596 C15orf39Q6ZRI6 1047 aa17.56■□□□□ 0.4
SNAP47-213ENST00000617596 WDR49Q8IV35 697 aa17.56■□□□□ 0.4
SNAP47-213ENST00000617596 TC2NQ8N9U0 490 aa17.56■□□□□ 0.4
SNAP47-213ENST00000617596 EHBP1Q8NDI1 1231 aa17.56■□□□□ 0.4
SNAP47-213ENST00000617596 DBF4BQ8NFT6 615 aa17.56■□□□□ 0.4
SNAP47-213ENST00000617596 CCDC51Q96ER9 411 aa17.56■□□□□ 0.4
SNAP47-213ENST00000617596 PRDM5Q9NQX1 630 aaPredicted RBP17.56■□□□□ 0.4
SNAP47-213ENST00000617596 TBX21Q9UL17 535 aa17.56■□□□□ 0.4
SNAP47-213ENST00000617596 SQORQ9Y6N5 450 aa17.56■□□□□ 0.4
SNAP47-213ENST00000617596 GTPBP10A4D1E9 387 aaKnown RBP17.55■□□□□ 0.4
SNAP47-213ENST00000617596 STX10O60499 249 aa17.55■□□□□ 0.4
SNAP47-213ENST00000617596 VNN1O95497 513 aa17.55■□□□□ 0.4
SNAP47-213ENST00000617596 CST3P01034 146 aaPredicted RBP17.55■□□□□ 0.4
SNAP47-213ENST00000617596 CLTBP09497 229 aa17.55■□□□□ 0.4
SNAP47-213ENST00000617596 ITGB8P26012 769 aa17.55■□□□□ 0.4
SNAP47-213ENST00000617596 GTF2H1P32780 548 aa17.55■□□□□ 0.4
SNAP47-213ENST00000617596 YARSP54577 528 aaKnown RBP17.55■□□□□ 0.4
SNAP47-213ENST00000617596 KLHDC7AQ5VTJ3 777 aa17.55■□□□□ 0.4
SNAP47-213ENST00000617596 DEFB128Q7Z7B8 93 aa17.55■□□□□ 0.4
SNAP47-213ENST00000617596 FBXL13Q8NEE6 735 aa17.55■□□□□ 0.4
SNAP47-213ENST00000617596 LINC01599Q8WXQ3 324 aa17.55■□□□□ 0.4
SNAP47-213ENST00000617596 SNX27Q96L92 541 aa17.55■□□□□ 0.4
SNAP47-213ENST00000617596 ZFP42Q96MM3 310 aa17.55■□□□□ 0.4
SNAP47-213ENST00000617596 GANQ9H2C0 597 aa17.55■□□□□ 0.4
SNAP47-213ENST00000617596 FHOD1Q9Y613 1164 aa17.55■□□□□ 0.4
SNAP47-213ENST00000617596 AKR1B15C9JRZ8 316 aaPredicted RBP17.55■□□□□ 0.4
SNAP47-213ENST00000617596 N4BP1O75113 896 aaKnown RBP17.55■□□□□ 0.4
SNAP47-213ENST00000617596 IL18RAPO95256 599 aa17.55■□□□□ 0.4
SNAP47-213ENST00000617596 TMEM191BP0C7N4 346 aa17.55■□□□□ 0.4
SNAP47-213ENST00000617596 AFF1P51825 1210 aaKnown RBP17.55■□□□□ 0.4
SNAP47-213ENST00000617596 CETN1Q12798 172 aa17.55■□□□□ 0.4
SNAP47-213ENST00000617596 KYAT1Q16773 422 aa17.55■□□□□ 0.4
SNAP47-213ENST00000617596 SPOPLQ6IQ16 392 aa17.55■□□□□ 0.4
SNAP47-213ENST00000617596 PHLDB3Q6NSJ2 640 aa17.55■□□□□ 0.4
SNAP47-213ENST00000617596 TRAPPC11Q7Z392 1133 aa17.55■□□□□ 0.4
SNAP47-213ENST00000617596 RAB20Q9NX57 234 aa17.55■□□□□ 0.4
SNAP47-213ENST00000617596 MFAP3LO75121 409 aa17.54■□□□□ 0.4
SNAP47-213ENST00000617596 PHACTR2O75167 634 aa17.54■□□□□ 0.4
SNAP47-213ENST00000617596 HLA-DRAP01903 254 aa17.54■□□□□ 0.4
SNAP47-213ENST00000617596 UCHL3P15374 230 aa17.54■□□□□ 0.4
SNAP47-213ENST00000617596 KRT9P35527 623 aa17.54■□□□□ 0.4
SNAP47-213ENST00000617596 PIK3CAP42336 1068 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms