RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 ZNF200P98182 395 aaPredicted RBP22.22■■□□□ 1.15
CNTNAP3B-212ENST00000617422 PRKCZQ05513 592 aa22.22■■□□□ 1.15
CNTNAP3B-212ENST00000617422 CDHR5Q9HBB8 845 aa22.22■■□□□ 1.15
CNTNAP3B-212ENST00000617422 APOBEC3GQ9HC16 384 aaKnown RBP22.22■■□□□ 1.15
CNTNAP3B-212ENST00000617422 MBLAC1A4D2B0 266 aaPredicted RBP22.21■■□□□ 1.15
CNTNAP3B-212ENST00000617422 CYP26A1O43174 497 aa22.21■■□□□ 1.15
CNTNAP3B-212ENST00000617422 CYBAP13498 195 aa22.21■■□□□ 1.15
CNTNAP3B-212ENST00000617422 ARF4P18085 180 aaPredicted RBP22.21■■□□□ 1.15
CNTNAP3B-212ENST00000617422 FGFR4P22455 802 aa22.21■■□□□ 1.15
CNTNAP3B-212ENST00000617422 ANXA13P27216 316 aa22.21■■□□□ 1.15
CNTNAP3B-212ENST00000617422 NOGQ13253 232 aa22.21■■□□□ 1.15
CNTNAP3B-212ENST00000617422 BIRC3Q13489 604 aa22.21■■□□□ 1.15
CNTNAP3B-212ENST00000617422 KIZQ2M2Z5 673 aa22.21■■□□□ 1.15
CNTNAP3B-212ENST00000617422 TMEM130Q8N3G9 435 aa22.21■■□□□ 1.15
CNTNAP3B-212ENST00000617422 U2AF1L4Q8WU68 220 aaKnown RBP22.21■■□□□ 1.15
CNTNAP3B-212ENST00000617422 CAPNS2Q96L46 248 aa22.21■■□□□ 1.15
CNTNAP3B-212ENST00000617422 ADAMTS10Q9H324 1103 aa22.21■■□□□ 1.15
CNTNAP3B-212ENST00000617422 PDZD7Q9H5P4 517 aa22.21■■□□□ 1.15
CNTNAP3B-212ENST00000617422 TAS2R14Q9NYV8 317 aa22.21■■□□□ 1.15
CNTNAP3B-212ENST00000617422 NRCAMQ92823 1304 aa22.21■■□□□ 1.15
CNTNAP3B-212ENST00000617422 CALCAP01258 141 aa22.21■■□□□ 1.15
CNTNAP3B-212ENST00000617422 PSEN2P49810 448 aa22.21■■□□□ 1.15
CNTNAP3B-212ENST00000617422 CPT1AP50416 773 aa22.21■■□□□ 1.15
CNTNAP3B-212ENST00000617422 MFAP3P55082 362 aa22.21■■□□□ 1.15
CNTNAP3B-212ENST00000617422 FSCN1Q16658 493 aaKnown RBP22.21■■□□□ 1.15
CNTNAP3B-212ENST00000617422 SLC47A2Q86VL8 602 aa22.21■■□□□ 1.15
CNTNAP3B-212ENST00000617422 FAM212AQ96EL1 285 aa22.21■■□□□ 1.15
CNTNAP3B-212ENST00000617422 AP5M1Q9H0R1 490 aa22.21■■□□□ 1.15
CNTNAP3B-212ENST00000617422 Q9Y3F1 56 aa22.21■■□□□ 1.15
CNTNAP3B-212ENST00000617422 RRN3P2A6NIE6 340 aa22.2■■□□□ 1.14
CNTNAP3B-212ENST00000617422 AKR1A1P14550 325 aa22.2■■□□□ 1.14
CNTNAP3B-212ENST00000617422 PIK3CAP42336 1068 aa22.2■■□□□ 1.14
CNTNAP3B-212ENST00000617422 TMEM132AQ24JP5 1023 aa22.2■■□□□ 1.14
CNTNAP3B-212ENST00000617422 NOP9Q86U38 636 aaKnown RBP22.2■■□□□ 1.14
CNTNAP3B-212ENST00000617422 CEP112Q8N8E3 955 aa22.2■■□□□ 1.14
CNTNAP3B-212ENST00000617422 EPS8L1Q8TE68 723 aa22.2■■□□□ 1.14
CNTNAP3B-212ENST00000617422 MTMR12Q9C0I1 747 aa22.2■■□□□ 1.14
CNTNAP3B-212ENST00000617422 CALCOCO1Q9P1Z2 691 aa22.2■■□□□ 1.14
CNTNAP3B-212ENST00000617422 CDC23Q9UJX2 597 aa22.2■■□□□ 1.14
CNTNAP3B-212ENST00000617422 NOCTQ9UK39 431 aaKnown RBP22.2■■□□□ 1.14
CNTNAP3B-212ENST00000617422 UMODL1Q5DID0 1318 aa22.2■■□□□ 1.14
CNTNAP3B-212ENST00000617422 TSPAN1O60635 241 aa22.19■■□□□ 1.14
CNTNAP3B-212ENST00000617422 SEC31AO94979 1220 aaKnown RBP22.19■■□□□ 1.14
CNTNAP3B-212ENST00000617422 CST3P01034 146 aaPredicted RBP22.19■■□□□ 1.14
CNTNAP3B-212ENST00000617422 CHRNB2P17787 502 aa22.19■■□□□ 1.14
CNTNAP3B-212ENST00000617422 BRD3Q15059 726 aa22.19■■□□□ 1.14
CNTNAP3B-212ENST00000617422 EFCAB13Q8IY85 973 aa22.19■■□□□ 1.14
CNTNAP3B-212ENST00000617422 AGPAT1Q99943 283 aa22.19■■□□□ 1.14
CNTNAP3B-212ENST00000617422 PARD6BQ9BYG5 372 aa22.19■■□□□ 1.14
CNTNAP3B-212ENST00000617422 CCDC151A5D8V7 595 aa22.19■■□□□ 1.14
CNTNAP3B-212ENST00000617422 TMCO5BA8MYB1 307 aa22.19■■□□□ 1.14
CNTNAP3B-212ENST00000617422 ZEB2O60315 1214 aa22.19■■□□□ 1.14
CNTNAP3B-212ENST00000617422 GPR32O75388 356 aa22.19■■□□□ 1.14
CNTNAP3B-212ENST00000617422 ALDH1A1P00352 501 aa22.19■■□□□ 1.14
CNTNAP3B-212ENST00000617422 CXCL8P10145 99 aa22.19■■□□□ 1.14
CNTNAP3B-212ENST00000617422 PURAQ00577 322 aaKnown RBP22.19■■□□□ 1.14
CNTNAP3B-212ENST00000617422 GCNT1Q02742 428 aa22.19■■□□□ 1.14
CNTNAP3B-212ENST00000617422 TRAPPC11Q7Z392 1133 aa22.19■■□□□ 1.14
CNTNAP3B-212ENST00000617422 SRGAP1Q7Z6B7 1085 aa22.19■■□□□ 1.14
CNTNAP3B-212ENST00000617422 TREHO43280 583 aa22.18■■□□□ 1.14
CNTNAP3B-212ENST00000617422 SRGAP2O75044 1071 aa22.18■■□□□ 1.14
CNTNAP3B-212ENST00000617422 ZC3H11AO75152 810 aaKnown RBP eCLIP22.18■■□□□ 1.14
CNTNAP3B-212ENST00000617422 DEFB115Q30KQ5 88 aa22.18■■□□□ 1.14
CNTNAP3B-212ENST00000617422 PAPD7Q5XG87 772 aaKnown RBP22.18■■□□□ 1.14
CNTNAP3B-212ENST00000617422 VPS36Q86VN1 386 aa22.18■■□□□ 1.14
CNTNAP3B-212ENST00000617422 WDR49Q8IV35 697 aa22.18■■□□□ 1.14
CNTNAP3B-212ENST00000617422 TRIM58Q8NG06 486 aa22.18■■□□□ 1.14
CNTNAP3B-212ENST00000617422 SCLT1Q96NL6 688 aa22.18■■□□□ 1.14
CNTNAP3B-212ENST00000617422 PCDHB18PQ96TA0 734 aa22.18■■□□□ 1.14
CNTNAP3B-212ENST00000617422 GINS2Q9Y248 185 aa22.18■■□□□ 1.14
CNTNAP3B-212ENST00000617422 NUB1Q9Y5A7 615 aa22.18■■□□□ 1.14
CNTNAP3B-212ENST00000617422 DUSP11O75319 330 aaKnown RBP22.18■■□□□ 1.14
CNTNAP3B-212ENST00000617422 C10orf76Q5T2E6 689 aa22.18■■□□□ 1.14
CNTNAP3B-212ENST00000617422 VTI1AQ96AJ9 217 aa22.18■■□□□ 1.14
CNTNAP3B-212ENST00000617422 C1orf112Q9NSG2 853 aa22.18■■□□□ 1.14
CNTNAP3B-212ENST00000617422 TACC1O75410 805 aa22.17■■□□□ 1.14
CNTNAP3B-212ENST00000617422 C6orf222P0C671 652 aaPredicted RBP22.17■■□□□ 1.14
CNTNAP3B-212ENST00000617422 CCDC172P0C7W6 258 aa22.17■■□□□ 1.14
CNTNAP3B-212ENST00000617422 CYP2C9P11712 490 aa22.17■■□□□ 1.14
CNTNAP3B-212ENST00000617422 GALCP54803 685 aa22.17■■□□□ 1.14
CNTNAP3B-212ENST00000617422 NCOA4Q13772 614 aa22.17■■□□□ 1.14
CNTNAP3B-212ENST00000617422 ZNF410Q86VK4 478 aa22.17■■□□□ 1.14
CNTNAP3B-212ENST00000617422 RNF10Q8N5U6 811 aaKnown RBP22.17■■□□□ 1.14
CNTNAP3B-212ENST00000617422 LUC7LQ9NQ29 371 aaKnown RBP22.17■■□□□ 1.14
CNTNAP3B-212ENST00000617422 RNF186Q9NXI6 227 aa22.17■■□□□ 1.14
CNTNAP3B-212ENST00000617422 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.17■■□□□ 1.14
CNTNAP3B-212ENST00000617422 PGK1P00558 417 aa22.16■■□□□ 1.14
CNTNAP3B-212ENST00000617422 TNFAIP3P21580 790 aa22.16■■□□□ 1.14
CNTNAP3B-212ENST00000617422 FMNL3Q8IVF7 1028 aa22.16■■□□□ 1.14
CNTNAP3B-212ENST00000617422 RPUSD2Q8IZ73 545 aaKnown RBP22.16■■□□□ 1.14
CNTNAP3B-212ENST00000617422 DNAJB3Q8WWF6 145 aa22.16■■□□□ 1.14
CNTNAP3B-212ENST00000617422 NOX5Q96PH1 765 aa22.16■■□□□ 1.14
CNTNAP3B-212ENST00000617422 SMIM35A0A1B0GVV1 85 aa22.16■■□□□ 1.14
CNTNAP3B-212ENST00000617422 NCK2O43639 380 aa22.16■■□□□ 1.14
CNTNAP3B-212ENST00000617422 STAG3L1P0CL83 205 aa22.16■■□□□ 1.14
CNTNAP3B-212ENST00000617422 ACO1P21399 889 aaKnown RBP22.16■■□□□ 1.14
CNTNAP3B-212ENST00000617422 CACNB2Q08289 660 aaPredicted RBP22.16■■□□□ 1.14
CNTNAP3B-212ENST00000617422 DDX1Q92499 740 aaKnown RBP22.16■■□□□ 1.14
CNTNAP3B-212ENST00000617422 OSMRQ99650 979 aa22.16■■□□□ 1.14
CNTNAP3B-212ENST00000617422 SEPT11Q9NVA2 429 aaKnown RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms