RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 RARRES1P49788 294 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 CCDC62Q6P9F0 684 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 PID1Q7Z2X4 250 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 TRIM59Q8IWR1 403 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 EFCAB13Q8IY85 973 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 KCNB2Q92953 911 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 TLK1Q9UKI8 766 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 HPCAL4Q9UM19 191 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 ALDH1A1P00352 501 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 CXCL8P10145 99 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 NNMTP40261 264 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 CDC42EP1Q00587 391 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 GIT2Q14161 759 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 CHADLQ6NUI6 762 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 RGMBQ6NW40 437 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 ENOSF1Q7L5Y1 443 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 ACOT1Q86TX2 421 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 PCSK9Q8NBP7 692 aaKnown RBP10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 IL31RAQ8NI17 732 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 PABPC5Q96DU9 382 aaKnown RBP10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 NIF3L1Q9GZT8 377 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 TMEM117Q9H0C3 514 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 SP110Q9HB58 689 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 IRAK4Q9NWZ3 460 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 KCND2Q9NZV8 630 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 MRPL42Q9Y6G3 142 aaKnown RBP10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 STRNO43815 780 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 ACVR2BQ13705 512 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 HEATR6Q6AI08 1181 aaKnown RBP10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 LRP10Q7Z4F1 713 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 GIMAP7Q8NHV1 300 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 RFFLQ8WZ73 363 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 THOC1Q96FV9 657 aaKnown RBP10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 RUNDC3BQ96NL0 473 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 SMARCAL1Q9NZC9 954 aa10.75□□□□□ -0.69
SMARCA1-205ENST00000617310 GLTPD2A6NH11 291 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 MIF4GDA9UHW6 222 aaKnown RBP10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 GPC4O75487 556 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 HSPA6P17066 643 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 GNL1P36915 607 aaPredicted RBP10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 GARSP41250 739 aaKnown RBP10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 NUDCD1Q96RS6 583 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 CAPN11Q9UMQ6 739 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 TACC3Q9Y6A5 838 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 CNTRLQ7Z7A1 2325 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 EXTL3O43909 919 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 TOM1L1O75674 476 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 PLEKP08567 350 aaPredicted RBP10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 TROVE2P10155 538 aaKnown RBP eCLIP10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 AKR1A1P14550 325 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 AP3M2P53677 418 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 GRIK4Q16099 956 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 TREML2Q5T2D2 321 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 TMTC4Q5T4D3 741 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 KCNK18Q7Z418 384 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 SPDYE1Q8NFV5 336 aaPredicted RBP10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 TAS1R2Q8TE23 839 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 ATP8B4Q8TF62 1192 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 PPP2R3CQ969Q6 453 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.74□□□□□ -0.693e-7■■■■■ 27
SMARCA1-205ENST00000617310 ATXN7L3BQ96GX2 97 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 RMDN2Q96LZ7 410 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 WDR24Q96S15 920 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 BPIFA3Q9BQP9 254 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 STK33Q9BYT3 514 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 SENP6Q9GZR1 1112 aaPredicted RBP10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 HMX1Q9NP08 348 aaPredicted RBP10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 MLXIPLQ9NP71 852 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 INTS9Q9NV88 658 aaKnown RBP10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 A0A1B0GTH6 734 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 A0A1W2PQC6 194 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 PPP1R3GB7ZBB8 358 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 ATP9BO43861 1147 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 CD4P01730 458 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 MT-ND3P03897 115 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 RALAP11233 206 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 KCNA4P22459 653 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 PCSK1P29120 753 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 SULT1E1P49888 294 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 GPS1Q13098 491 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 RHOT1Q8IXI2 618 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 CCDC33Q8N5R6 958 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 C1orf131Q8NDD1 294 aaKnown RBP10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 STMN2Q93045 179 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 RMDN1Q96DB5 314 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 ASIC4Q96FT7 647 aa10.74□□□□□ -0.69
SMARCA1-205ENST00000617310 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.74□□□□□ -0.692e-7■□□□□ 8.8
SMARCA1-205ENST00000617310 TISP43B9A030 160 aa10.73□□□□□ -0.69
SMARCA1-205ENST00000617310 ADCY3O60266 1144 aa10.73□□□□□ -0.69
SMARCA1-205ENST00000617310 ATP1A1P05023 1023 aaKnown RBP10.73□□□□□ -0.69
SMARCA1-205ENST00000617310 KRT7P08729 469 aa10.73□□□□□ -0.69
SMARCA1-205ENST00000617310 CA4P22748 312 aa10.73□□□□□ -0.69
SMARCA1-205ENST00000617310 TAF6P49848 677 aa10.73□□□□□ -0.69
SMARCA1-205ENST00000617310 LAMTOR4Q0VGL1 99 aa10.73□□□□□ -0.69
SMARCA1-205ENST00000617310 TMEM132BQ14DG7 1078 aa10.73□□□□□ -0.69
SMARCA1-205ENST00000617310 TMC7Q7Z402 723 aa10.73□□□□□ -0.69
SMARCA1-205ENST00000617310 RDM1Q8NG50 284 aa10.73□□□□□ -0.69
SMARCA1-205ENST00000617310 SLC7A14Q8TBB6 771 aa10.73□□□□□ -0.69
SMARCA1-205ENST00000617310 BCAS4Q8TDM0 211 aa10.73□□□□□ -0.69
SMARCA1-205ENST00000617310 ZBTB45Q96K62 511 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms