RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 CLDN3O15551 220 aa16.71■□□□□ 0.27
SEMA3B-212ENST00000616701 C4BPAP04003 597 aaKnown RBP16.71■□□□□ 0.27
SEMA3B-212ENST00000616701 PDE6CP51160 858 aa16.71■□□□□ 0.27
SEMA3B-212ENST00000616701 TTLL4Q14679 1199 aa16.71■□□□□ 0.27
SEMA3B-212ENST00000616701 SLFN11Q7Z7L1 901 aa16.71■□□□□ 0.27
SEMA3B-212ENST00000616701 LMBR1Q8WVP7 490 aa16.71■□□□□ 0.27
SEMA3B-212ENST00000616701 BRI3BPQ8WY22 251 aa16.71■□□□□ 0.27
SEMA3B-212ENST00000616701 STYXL1Q9Y6J8 313 aa16.71■□□□□ 0.27
SEMA3B-212ENST00000616701 B4GALT5O43286 388 aa16.71■□□□□ 0.26
SEMA3B-212ENST00000616701 GLI1P08151 1106 aa16.71■□□□□ 0.26
SEMA3B-212ENST00000616701 ITGA4P13612 1032 aa16.71■□□□□ 0.26
SEMA3B-212ENST00000616701 AADACL2Q6P093 401 aa16.71■□□□□ 0.26
SEMA3B-212ENST00000616701 FMNL3Q8IVF7 1028 aa16.71■□□□□ 0.26
SEMA3B-212ENST00000616701 MICALL1Q8N3F8 863 aa16.71■□□□□ 0.26
SEMA3B-212ENST00000616701 USP38Q8NB14 1042 aa16.71■□□□□ 0.26
SEMA3B-212ENST00000616701 APOBEC3GQ9HC16 384 aaKnown RBP16.71■□□□□ 0.26
SEMA3B-212ENST00000616701 INO80B-WBP1J3KQ70 363 aa16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 ZNF286BP0CG31 522 aa16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 GTF2H1P32780 548 aa16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 ADCYAP1R1P41586 468 aa16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 INHBEP58166 350 aa16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 MESDQ14696 234 aa16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 ZACNQ401N2 412 aa16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 ZC3H12AQ5D1E8 599 aaKnown RBP16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 SWT1Q5T5J6 900 aaKnown RBP16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 C15orf39Q6ZRI6 1047 aa16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 IFT81Q8WYA0 676 aa16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 MS4A4AQ96JQ5 239 aa16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 FAM167AQ96KS9 214 aa16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 INO80BQ9C086 356 aaPredicted RBP16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 PNMA3Q9UL41 463 aa16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 NOC2LQ9Y3T9 749 aaKnown RBP16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 EVPLQ92817 2033 aa16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 PHACTR2O75167 634 aa16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 LGR5O75473 907 aa16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 PRKCBP05771 671 aa16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 GUCY2DQ02846 1103 aa16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 WDR44Q5JSH3 913 aa16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 SLFN12LQ6IEE8 588 aa16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 EFCAB12Q6NXP0 572 aa16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 LLGL2Q6P1M3 1020 aa16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 THNSL1Q8IYQ7 743 aa16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 ISCUQ9H1K1 167 aa16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 STIM2Q9P246 746 aa16.7■□□□□ 0.26
SEMA3B-212ENST00000616701 MSCO60682 206 aa16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 RTN2O75298 545 aa16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 PAX7P23759 505 aa16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 COPB2P35606 906 aa16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 IER5Q5VY09 327 aa16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 PNMA8AQ86V59 439 aaPredicted RBP16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 SYCE1Q8N0S2 351 aa16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 CCDC102AQ96A19 550 aa16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 SELENOOQ9BVL4 669 aa16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 KIAA1586Q9HCI6 787 aa16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 ADAM21Q9UKJ8 722 aa16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 DAAM1Q9Y4D1 1078 aa16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 HEXIM1O94992 359 aaKnown RBP16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 CFHP08603 1231 aa16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 ZBTB48P10074 688 aaPredicted RBP16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 MARCKSL1P49006 195 aa16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 GPC5P78333 572 aa16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 ITIH3Q06033 890 aa16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 LLGL1Q15334 1064 aa16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 KCNV1Q6PIU1 500 aa16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 LEKR1Q6ZMV7 388 aa16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 SND1Q7KZF4 910 aaKnown RBP eCLIP16.69■□□□□ 0.262e-8■■■□□ 18
SEMA3B-212ENST00000616701 PASD1Q8IV76 773 aa16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 SCFD2Q8WU76 684 aa16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 ZNF653Q96CK0 615 aa16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 DDX47Q9H0S4 455 aaKnown RBP16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 TMEM134Q9H6X4 195 aa16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 EPB41L5Q9HCM4 733 aa16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 ADGRA2Q96PE1 1338 aa16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 CNTNAP2Q9UHC6 1331 aa16.69■□□□□ 0.26
SEMA3B-212ENST00000616701 RAD51CO43502 376 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 PIGRP01833 764 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 CDR2Q01850 454 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 ZKSCAN8Q15776 578 aaPredicted RBP16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 DCAF12L1Q5VU92 463 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 AFG1LQ8WV93 481 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 CPA5Q8WXQ8 436 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 HES6Q96HZ4 224 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 MRPL4Q9BYD3 311 aaKnown RBP16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 MINDY3Q9H8M7 445 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 ALG6Q9Y672 507 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 ASB14A6NK59 587 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 TUBBP07437 444 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 ARHGAP1Q07960 439 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 MAPK6Q16659 721 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 TAPT1Q6NXT6 567 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 PLPPR4Q7Z2D5 763 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 SUGP1Q8IWZ8 645 aaKnown RBP16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 DDX1Q92499 740 aaKnown RBP16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 VTI1AQ96AJ9 217 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 PBKQ96KB5 322 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 SMARCAD1Q9H4L7 1026 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 RNF14Q9UBS8 474 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 KLHL33A6NCF5 533 aa16.68■□□□□ 0.26
SEMA3B-212ENST00000616701 CST3P01034 146 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms