RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 SLC1A1P43005 524 aa14.03□□□□□ -0.16
PPP4R3B-206ENST00000616407 CYP24A1Q07973 514 aa14.03□□□□□ -0.16
PPP4R3B-206ENST00000616407 PPP6R3Q5H9R7 873 aaPredicted RBP14.03□□□□□ -0.16
PPP4R3B-206ENST00000616407 HP1BP3Q5SSJ5 553 aaPredicted RBP14.03□□□□□ -0.16
PPP4R3B-206ENST00000616407 ACAD10Q6JQN1 1059 aa14.03□□□□□ -0.16
PPP4R3B-206ENST00000616407 FGFR4P22455 802 aa14.03□□□□□ -0.16
PPP4R3B-206ENST00000616407 PPP3CAQ08209 521 aa14.03□□□□□ -0.16
PPP4R3B-206ENST00000616407 CCDC197Q8NCU1 140 aa14.03□□□□□ -0.16
PPP4R3B-206ENST00000616407 TMC2Q8TDI7 906 aa14.03□□□□□ -0.16
PPP4R3B-206ENST00000616407 SMC6Q96SB8 1091 aa14.03□□□□□ -0.16
PPP4R3B-206ENST00000616407 FAM118BQ9BPY3 351 aa14.03□□□□□ -0.16
PPP4R3B-206ENST00000616407 ERP44Q9BS26 406 aa14.03□□□□□ -0.16
PPP4R3B-206ENST00000616407 ANKRD63C9JTQ0 380 aa14.02□□□□□ -0.16
PPP4R3B-206ENST00000616407 SARNPP82979 210 aaKnown RBP14.02□□□□□ -0.16
PPP4R3B-206ENST00000616407 ATF7IP2Q5U623 682 aa14.02□□□□□ -0.16
PPP4R3B-206ENST00000616407 SCFD2Q8WU76 684 aa14.02□□□□□ -0.16
PPP4R3B-206ENST00000616407 KAT5Q92993 513 aa14.02□□□□□ -0.16
PPP4R3B-206ENST00000616407 AGAP1Q9UPQ3 857 aa14.02□□□□□ -0.16
PPP4R3B-206ENST00000616407 GOLGA8MH3BSY2 632 aa14.02□□□□□ -0.16
PPP4R3B-206ENST00000616407 NAMPTP43490 491 aa14.02□□□□□ -0.16
PPP4R3B-206ENST00000616407 CCDC6Q16204 474 aa14.02□□□□□ -0.16
PPP4R3B-206ENST00000616407 PARD3BQ8TEW8 1205 aa14.02□□□□□ -0.16
PPP4R3B-206ENST00000616407 KIF12Q96FN5 646 aa14.02□□□□□ -0.16
PPP4R3B-206ENST00000616407 ZNF263O14978 683 aa14.02□□□□□ -0.17
PPP4R3B-206ENST00000616407 PPP2R2AP63151 447 aa14.02□□□□□ -0.17
PPP4R3B-206ENST00000616407 ITGB3BPQ13352 177 aaPredicted RBP14.02□□□□□ -0.17
PPP4R3B-206ENST00000616407 SNAPC2Q13487 334 aa14.02□□□□□ -0.17
PPP4R3B-206ENST00000616407 SPOPLQ6IQ16 392 aa14.02□□□□□ -0.17
PPP4R3B-206ENST00000616407 ERO1BQ86YB8 467 aa14.02□□□□□ -0.17
PPP4R3B-206ENST00000616407 SPATC1LQ9H0A9 340 aa14.02□□□□□ -0.17
PPP4R3B-206ENST00000616407 LRRC4Q9HBW1 653 aa14.02□□□□□ -0.17
PPP4R3B-206ENST00000616407 KRT3P12035 628 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 GZMAP12544 262 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 ITGA4P13612 1032 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 GTF2H1P32780 548 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 CUL2Q13617 745 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 FAM102AQ5T9C2 384 aaPredicted RBP14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 C6orf163Q5TEZ5 329 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 FOXR2Q6PJQ5 311 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 CENPUQ71F23 418 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 PDIK1LQ8N165 341 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 GDAP1Q8TB36 358 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 PYROXD1Q8WU10 500 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 ZSWIM1Q9BR11 485 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 PDGFDQ9GZP0 370 aaPredicted RBP14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 A0A0A6YYK5 440 aaPredicted RBP14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 PIK3R2O00459 728 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 INHBAP08476 426 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 MYL3P08590 195 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 ATL2Q8NHH9 583 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 JAG1P78504 1218 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 IL9RQ01113 521 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 AMPD2Q01433 879 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 GPS1Q13098 491 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 RRP1BQ14684 758 aaKnown RBP14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 ZCWPW2Q504Y3 356 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 CCNYQ8ND76 341 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 ACTRT1Q8TDG2 376 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 C18orf8Q96DM3 657 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 MCEEQ96PE7 176 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 P2RX7Q99572 595 aaKnown RBP14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 IFT122Q9HBG6 1241 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 ADARB2Q9NS39 739 aaKnown RBP14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 IGLV3-22A0A075B6J6 115 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 HBP1O60381 514 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 PRKCIP41743 596 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 CLCN3P51790 818 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 CCDC60Q8IWA6 550 aaPredicted RBP14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 LRRC15Q8TF66 581 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 ACAP3Q96P50 834 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 SENP7Q9BQF6 1050 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 ASNSD1Q9NWL6 643 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 ERAP1Q9NZ08 941 aa14.01□□□□□ -0.17
PPP4R3B-206ENST00000616407 TLR2O60603 784 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 CA8P35219 290 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 PTGER2P43116 358 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 OAZ1P54368 228 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 BMT2Q1RMZ1 405 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 IZUMO3Q5VZ72 239 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 FBXO16Q8IX29 292 aaPredicted RBP14□□□□□ -0.17
PPP4R3B-206ENST00000616407 SPIRE2Q8WWL2 714 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 SNF8Q96H20 258 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 TTYH3Q9C0H2 523 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 MLXIPLQ9NP71 852 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 ACP6Q9NPH0 428 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 HEY1Q9Y5J3 304 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 PLA2G6O60733 806 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 KRT7P08729 469 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 ZNF131P52739 623 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 TMEM62Q0P6H9 643 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 LY6KQ17RY6 165 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 CCDC38Q502W7 563 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 PHLDB3Q6NSJ2 640 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 GPAT2Q6NUI2 795 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 ARHGEF18Q6ZSZ5 1173 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 IRF2BP2Q7Z5L9 587 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 RSPH3Q86UC2 560 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 SLC13A5Q86YT5 568 aaPredicted RBP14□□□□□ -0.17
PPP4R3B-206ENST00000616407 SIAH1Q8IUQ4 282 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 LRRC8CQ8TDW0 803 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms