RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 POU2F2P09086 479 aa20.8■□□□□ 0.92
CDX1-202ENST00000616154 RAB33AQ14088 237 aa20.8■□□□□ 0.92
CDX1-202ENST00000616154 ANGPT1Q15389 498 aa20.8■□□□□ 0.92
CDX1-202ENST00000616154 GLRA4Q5JXX5 417 aa20.8■□□□□ 0.92
CDX1-202ENST00000616154 DCLRE1AQ6PJP8 1040 aa20.8■□□□□ 0.92
CDX1-202ENST00000616154 GRASPQ7Z6J2 395 aaPredicted RBP20.8■□□□□ 0.92
CDX1-202ENST00000616154 GPR152Q8TDT2 470 aa20.8■□□□□ 0.92
CDX1-202ENST00000616154 SNX29Q8TEQ0 813 aa20.8■□□□□ 0.92
CDX1-202ENST00000616154 UROC1Q96N76 676 aa20.8■□□□□ 0.92
CDX1-202ENST00000616154 SLC2A4RGQ9NR83 387 aa20.8■□□□□ 0.92
CDX1-202ENST00000616154 MTRRQ9UBK8 725 aa20.8■□□□□ 0.92
CDX1-202ENST00000616154 NUMBLQ9Y6R0 609 aa20.8■□□□□ 0.92
CDX1-202ENST00000616154 GVINP1Q7Z2Y8 2422 aa20.8■□□□□ 0.92
CDX1-202ENST00000616154 K7ERI5 159 aa20.79■□□□□ 0.92
CDX1-202ENST00000616154 B3GAT3O94766 335 aa20.79■□□□□ 0.92
CDX1-202ENST00000616154 PDCP20941 246 aa20.79■□□□□ 0.92
CDX1-202ENST00000616154 RFX1P22670 979 aa20.79■□□□□ 0.92
CDX1-202ENST00000616154 KRT79Q5XKE5 535 aa20.79■□□□□ 0.92
CDX1-202ENST00000616154 NKD2Q969F2 451 aaPredicted RBP20.79■□□□□ 0.92
CDX1-202ENST00000616154 TBC1D17Q9HA65 648 aa20.79■□□□□ 0.92
CDX1-202ENST00000616154 CDH7Q9ULB5 785 aa20.79■□□□□ 0.92
CDX1-202ENST00000616154 MYH11P35749 1972 aa20.79■□□□□ 0.92
CDX1-202ENST00000616154 PP2D1A8MPX8 630 aa20.78■□□□□ 0.92
CDX1-202ENST00000616154 STK25O00506 426 aa20.78■□□□□ 0.92
CDX1-202ENST00000616154 XYLBO75191 536 aa20.78■□□□□ 0.92
CDX1-202ENST00000616154 OR1D2P34982 312 aa20.78■□□□□ 0.92
CDX1-202ENST00000616154 NPTX2P47972 431 aa20.78■□□□□ 0.92
CDX1-202ENST00000616154 CLCNKBP51801 687 aa20.78■□□□□ 0.92
CDX1-202ENST00000616154 NTHL1P78549 312 aa20.78■□□□□ 0.92
CDX1-202ENST00000616154 UPP1Q16831 310 aa20.78■□□□□ 0.92
CDX1-202ENST00000616154 UVSSAQ2YD98 709 aa20.78■□□□□ 0.92
CDX1-202ENST00000616154 PHLDB3Q6NSJ2 640 aa20.78■□□□□ 0.92
CDX1-202ENST00000616154 CD300LGQ6UXG3 332 aa20.78■□□□□ 0.92
CDX1-202ENST00000616154 SLC7A14Q8TBB6 771 aa20.78■□□□□ 0.92
CDX1-202ENST00000616154 ACO2Q99798 780 aaKnown RBP20.78■□□□□ 0.92
CDX1-202ENST00000616154 TMEM134Q9H6X4 195 aa20.78■□□□□ 0.92
CDX1-202ENST00000616154 ARHGEF3Q9NR81 526 aa20.78■□□□□ 0.92
CDX1-202ENST00000616154 BACE2Q9Y5Z0 518 aa20.78■□□□□ 0.92
CDX1-202ENST00000616154 PDCD11Q14690 1871 aaKnown RBP20.78■□□□□ 0.92
CDX1-202ENST00000616154 MIA3Q5JRA6 1907 aa20.78■□□□□ 0.92
CDX1-202ENST00000616154 CCL16O15467 120 aa20.78■□□□□ 0.92
CDX1-202ENST00000616154 SLC26A4O43511 780 aa20.78■□□□□ 0.92
CDX1-202ENST00000616154 BMP15O95972 392 aa20.78■□□□□ 0.92
CDX1-202ENST00000616154 IGFBP6P24592 240 aaPredicted RBP20.78■□□□□ 0.92
CDX1-202ENST00000616154 GRM5P41594 1212 aa20.78■□□□□ 0.92
CDX1-202ENST00000616154 PEX3P56589 373 aa20.78■□□□□ 0.92
CDX1-202ENST00000616154 XKR4Q5GH76 650 aa20.78■□□□□ 0.92
CDX1-202ENST00000616154 AXDND1Q5T1B0 1012 aaPredicted RBP20.78■□□□□ 0.92
CDX1-202ENST00000616154 RTL10Q7L3V2 364 aa20.78■□□□□ 0.92
CDX1-202ENST00000616154 DAW1Q8N136 415 aa20.78■□□□□ 0.92
CDX1-202ENST00000616154 CCDC94Q9BW85 323 aaPredicted RBP20.78■□□□□ 0.92
CDX1-202ENST00000616154 CDT1Q9H211 546 aa20.78■□□□□ 0.92
CDX1-202ENST00000616154 PTPRHQ9HD43 1115 aa20.78■□□□□ 0.92
CDX1-202ENST00000616154 TOPORSQ9NS56 1045 aaPredicted RBP20.78■□□□□ 0.92
CDX1-202ENST00000616154 ARHGAP28Q9P2N2 729 aa20.78■□□□□ 0.92
CDX1-202ENST00000616154 DNM3Q9UQ16 869 aa20.78■□□□□ 0.92
CDX1-202ENST00000616154 SMIM28A0A1B0GU29 152 aa20.77■□□□□ 0.91
CDX1-202ENST00000616154 CCDC169A6NNP5 214 aa20.77■□□□□ 0.91
CDX1-202ENST00000616154 E9PMD0 336 aa20.77■□□□□ 0.91
CDX1-202ENST00000616154 TRAPPC3O43617 180 aa20.77■□□□□ 0.91
CDX1-202ENST00000616154 HIP1RO75146 1068 aa20.77■□□□□ 0.91
CDX1-202ENST00000616154 YARSP54577 528 aaKnown RBP20.77■□□□□ 0.91
CDX1-202ENST00000616154 DMP1Q13316 513 aaPredicted RBP20.77■□□□□ 0.91
CDX1-202ENST00000616154 ZNF568Q3ZCX4 644 aa20.77■□□□□ 0.91
CDX1-202ENST00000616154 PARM1Q6UWI2 310 aa20.77■□□□□ 0.91
CDX1-202ENST00000616154 ALKAL1Q6UXT8 129 aa20.77■□□□□ 0.91
CDX1-202ENST00000616154 RSPO2Q6UXX9 243 aaPredicted RBP20.77■□□□□ 0.91
CDX1-202ENST00000616154 CEP120Q8N960 986 aa20.77■□□□□ 0.91
CDX1-202ENST00000616154 C3orf58Q8NDZ4 430 aa20.77■□□□□ 0.91
CDX1-202ENST00000616154 FGF13Q92913 245 aa20.77■□□□□ 0.91
CDX1-202ENST00000616154 FGF14Q92915 247 aa20.77■□□□□ 0.91
CDX1-202ENST00000616154 DDX27Q96GQ7 796 aaKnown RBP20.77■□□□□ 0.91
CDX1-202ENST00000616154 AK8Q96MA6 479 aa20.77■□□□□ 0.91
CDX1-202ENST00000616154 DRC1Q96MC2 740 aa20.77■□□□□ 0.91
CDX1-202ENST00000616154 MRPL4Q9BYD3 311 aaKnown RBP20.77■□□□□ 0.91
CDX1-202ENST00000616154 GOLGA2P5Q9HBQ8 144 aa20.77■□□□□ 0.91
CDX1-202ENST00000616154 POLIQ9UNA4 740 aa20.77■□□□□ 0.91
CDX1-202ENST00000616154 CDY1Q9Y6F8 540 aa20.77■□□□□ 0.91
CDX1-202ENST00000616154 TKTP29401 623 aaKnown RBP20.76■□□□□ 0.91
CDX1-202ENST00000616154 CDC25AP30304 524 aa20.76■□□□□ 0.91
CDX1-202ENST00000616154 MAPK7Q13164 816 aa20.76■□□□□ 0.91
CDX1-202ENST00000616154 ANKS3Q6ZW76 656 aa20.76■□□□□ 0.91
CDX1-202ENST00000616154 MTSS1LQ765P7 747 aa20.76■□□□□ 0.91
CDX1-202ENST00000616154 TAS1R3Q7RTX0 852 aa20.76■□□□□ 0.91
CDX1-202ENST00000616154 KCNK18Q7Z418 384 aa20.76■□□□□ 0.91
CDX1-202ENST00000616154 ST13P5Q8NFI4 369 aaPredicted RBP20.76■□□□□ 0.91
CDX1-202ENST00000616154 ITFG1Q8TB96 612 aa20.76■□□□□ 0.91
CDX1-202ENST00000616154 RPP25Q9BUL9 199 aaKnown RBP20.76■□□□□ 0.91
CDX1-202ENST00000616154 RUSC1Q9BVN2 902 aa20.76■□□□□ 0.91
CDX1-202ENST00000616154 C17orf75Q9HAS0 396 aa20.76■□□□□ 0.91
CDX1-202ENST00000616154 SLC38A7Q9NVC3 462 aa20.76■□□□□ 0.91
CDX1-202ENST00000616154 FANCMQ8IYD8 2048 aa20.75■□□□□ 0.91
CDX1-202ENST00000616154 MCF2P10911 925 aa20.75■□□□□ 0.91
CDX1-202ENST00000616154 PROZP22891 400 aa20.75■□□□□ 0.91
CDX1-202ENST00000616154 BRCC3P46736 316 aa20.75■□□□□ 0.91
CDX1-202ENST00000616154 SOX4Q06945 474 aaPredicted RBP20.75■□□□□ 0.91
CDX1-202ENST00000616154 RINT1Q6NUQ1 792 aa20.75■□□□□ 0.91
CDX1-202ENST00000616154 C1orf186Q6ZWK4 172 aa20.75■□□□□ 0.91
CDX1-202ENST00000616154 SNX27Q96L92 541 aa20.75■□□□□ 0.91
CDX1-202ENST00000616154 PNMA5Q96PV4 448 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms