RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 FAM47DPA6NHR8 397 aa14□□□□□ -0.17
MSH6-214ENST00000616033 BHMG1C9JSJ3 638 aaPredicted RBP14□□□□□ -0.17
MSH6-214ENST00000616033 TPD52L2O43399 206 aaKnown RBP14□□□□□ -0.17
MSH6-214ENST00000616033 ATP9AO75110 1047 aa14□□□□□ -0.17
MSH6-214ENST00000616033 ATP6V1G1O75348 118 aa14□□□□□ -0.17
MSH6-214ENST00000616033 PLS3P13797 630 aa14□□□□□ -0.17
MSH6-214ENST00000616033 KCNA3P22001 575 aa14□□□□□ -0.17
MSH6-214ENST00000616033 MAPK4P31152 587 aa14□□□□□ -0.17
MSH6-214ENST00000616033 RASSF2P50749 326 aa14□□□□□ -0.17
MSH6-214ENST00000616033 CDR2Q01850 454 aa14□□□□□ -0.17
MSH6-214ENST00000616033 NOP9Q86U38 636 aaKnown RBP14□□□□□ -0.17
MSH6-214ENST00000616033 MAGEB18Q96M61 343 aa14□□□□□ -0.17
MSH6-214ENST00000616033 TRABDQ9H4I3 376 aa14□□□□□ -0.17
MSH6-214ENST00000616033 C10orf88Q9H8K7 445 aa14□□□□□ -0.17
MSH6-214ENST00000616033 NMRK1Q9NWW6 199 aa14□□□□□ -0.17
MSH6-214ENST00000616033 ZNF232Q9UNY5 417 aa14□□□□□ -0.17
MSH6-214ENST00000616033 MIF4GDA9UHW6 222 aaKnown RBP14□□□□□ -0.17
MSH6-214ENST00000616033 K7ENM7 598 aa14□□□□□ -0.17
MSH6-214ENST00000616033 GAS8O95995 478 aa14□□□□□ -0.17
MSH6-214ENST00000616033 MTMR2Q13614 643 aa14□□□□□ -0.17
MSH6-214ENST00000616033 KPNB1Q14974 876 aaKnown RBP14□□□□□ -0.17
MSH6-214ENST00000616033 DBN1Q16643 649 aa14□□□□□ -0.17
MSH6-214ENST00000616033 SNX30Q5VWJ9 437 aa14□□□□□ -0.17
MSH6-214ENST00000616033 TRMT10CQ7L0Y3 403 aaKnown RBP14□□□□□ -0.17
MSH6-214ENST00000616033 ZNF804AQ7Z570 1209 aa14□□□□□ -0.17
MSH6-214ENST00000616033 CROCCP2Q86T23 111 aa14□□□□□ -0.17
MSH6-214ENST00000616033 CPA5Q8WXQ8 436 aa14□□□□□ -0.17
MSH6-214ENST00000616033 STMN2Q93045 179 aa14□□□□□ -0.17
MSH6-214ENST00000616033 SNF8Q96H20 258 aa14□□□□□ -0.17
MSH6-214ENST00000616033 GPR88Q9GZN0 384 aa14□□□□□ -0.17
MSH6-214ENST00000616033 PCYOX1Q9UHG3 505 aa14□□□□□ -0.17
MSH6-214ENST00000616033 ARHGAP22Q7Z5H3 698 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 ANKRD35Q8N283 1001 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 SCG3Q8WXD2 468 aaKnown RBP13.99□□□□□ -0.17
MSH6-214ENST00000616033 TTC1Q99614 292 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 PI4K2AQ9BTU6 479 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 PARVGQ9HBI0 331 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 ARMCX1Q9P291 453 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 PPP3CAQ08209 521 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 P3H1Q32P28 736 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 TRAPPC3LQ5T215 181 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 SLC25A41Q8N5S1 370 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 PDCD7Q8N8D1 485 aaKnown RBP13.99□□□□□ -0.17
MSH6-214ENST00000616033 SMC6Q96SB8 1091 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 CBWD1Q9BRT8 395 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 FBXO6Q9NRD1 293 aaPredicted RBP13.99□□□□□ -0.17
MSH6-214ENST00000616033 SCOCQ9UIL1 159 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 DIS3Q9Y2L1 958 aaKnown RBP13.99□□□□□ -0.17
MSH6-214ENST00000616033 CDH16O75309 829 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 RTN3O95197 1032 aaPredicted RBP13.99□□□□□ -0.17
MSH6-214ENST00000616033 GDF11O95390 407 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 RALAP11233 206 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 KRT10P13645 584 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 SP100P23497 879 aaPredicted RBP13.99□□□□□ -0.17
MSH6-214ENST00000616033 CTNNA2P26232 953 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 DEUP1Q05D60 604 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 CETN1Q12798 172 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 SLC1A5Q15758 541 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 VPS72Q15906 364 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 CERKLQ49MI3 558 aaPredicted RBP13.99□□□□□ -0.17
MSH6-214ENST00000616033 LVRNQ6Q4G3 990 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 TPTE2Q6XPS3 522 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 NLRP9Q7RTR0 991 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 PRR11Q96HE9 360 aaPredicted RBP13.99□□□□□ -0.17
MSH6-214ENST00000616033 FGD4Q96M96 766 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 GBP5Q96PP8 586 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 MKNK1Q9BUB5 465 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 ROPN1BQ9BZX4 212 aaPredicted RBP13.99□□□□□ -0.17
MSH6-214ENST00000616033 PHACTR1Q9C0D0 580 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 ROPN1Q9HAT0 212 aaPredicted RBP13.99□□□□□ -0.17
MSH6-214ENST00000616033 AGPAT3Q9NRZ7 376 aa13.99□□□□□ -0.17
MSH6-214ENST00000616033 NCANO14594 1321 aa13.98□□□□□ -0.17
MSH6-214ENST00000616033 A6NHS1 94 aa13.98□□□□□ -0.17
MSH6-214ENST00000616033 MSH4O15457 936 aa13.98□□□□□ -0.17
MSH6-214ENST00000616033 GYG2O15488 501 aa13.98□□□□□ -0.17
MSH6-214ENST00000616033 RPA1P27694 616 aa13.98□□□□□ -0.17
MSH6-214ENST00000616033 CETN2P41208 172 aa13.98□□□□□ -0.17
MSH6-214ENST00000616033 PDCD2Q16342 344 aaPredicted RBP13.98□□□□□ -0.17
MSH6-214ENST00000616033 LMBRD2Q68DH5 695 aaPredicted RBP13.98□□□□□ -0.17
MSH6-214ENST00000616033 CCDC125Q86Z20 511 aa13.98□□□□□ -0.17
MSH6-214ENST00000616033 HIPK4Q8NE63 616 aa13.98□□□□□ -0.17
MSH6-214ENST00000616033 TMEM117Q9H0C3 514 aa13.98□□□□□ -0.17
MSH6-214ENST00000616033 VCXQ9H320 206 aa13.98□□□□□ -0.17
MSH6-214ENST00000616033 CCDC134Q9H6E4 229 aa13.98□□□□□ -0.17
MSH6-214ENST00000616033 ZNF148Q9UQR1 794 aa13.98□□□□□ -0.17
MSH6-214ENST00000616033 TMEM150BA6NC51 233 aa13.98□□□□□ -0.17
MSH6-214ENST00000616033 ATP6V1C1P21283 382 aa13.98□□□□□ -0.17
MSH6-214ENST00000616033 DRG2P55039 364 aaKnown RBP13.98□□□□□ -0.17
MSH6-214ENST00000616033 BFSP1Q12934 665 aa13.98□□□□□ -0.17
MSH6-214ENST00000616033 PPP1R18Q6NYC8 613 aa13.98□□□□□ -0.17
MSH6-214ENST00000616033 PPP1R21Q6ZMI0 780 aa13.98□□□□□ -0.17
MSH6-214ENST00000616033 SLFN12Q8IYM2 578 aa13.98□□□□□ -0.17
MSH6-214ENST00000616033 ZBED8Q8IZ13 594 aa13.98□□□□□ -0.17
MSH6-214ENST00000616033 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.97□□□□□ -0.17
MSH6-214ENST00000616033 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.97□□□□□ -0.17
MSH6-214ENST00000616033 SPARCL1Q14515 664 aa13.97□□□□□ -0.17
MSH6-214ENST00000616033 ZYXQ15942 572 aaKnown RBP13.97□□□□□ -0.17
MSH6-214ENST00000616033 ATP13A4Q4VNC1 1196 aa13.97□□□□□ -0.17
MSH6-214ENST00000616033 CWF19L1Q69YN2 538 aaKnown RBP13.97□□□□□ -0.17
MSH6-214ENST00000616033 GLIS1Q8NBF1 620 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms