RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 GRAMD1AQ96CP6 724 aa9.64□□□□□ -0.87
SPTBN1-207ENST00000615901 PCDHB2Q9Y5E7 798 aa9.64□□□□□ -0.87
SPTBN1-207ENST00000615901 TNPO2O14787 897 aaKnown RBP9.64□□□□□ -0.87
SPTBN1-207ENST00000615901 MSH4O15457 936 aa9.64□□□□□ -0.87
SPTBN1-207ENST00000615901 HNRNPCL1O60812 293 aaKnown RBP9.64□□□□□ -0.87
SPTBN1-207ENST00000615901 PDZD8Q8NEN9 1154 aa9.64□□□□□ -0.87
SPTBN1-207ENST00000615901 DNAJC5Q9H3Z4 198 aa9.64□□□□□ -0.87
SPTBN1-207ENST00000615901 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.64□□□□□ -0.87
SPTBN1-207ENST00000615901 A0A0G2JND7 137 aa9.64□□□□□ -0.87
SPTBN1-207ENST00000615901 GRIN3BO60391 1043 aa9.64□□□□□ -0.87
SPTBN1-207ENST00000615901 ARSEP51690 589 aa9.64□□□□□ -0.87
SPTBN1-207ENST00000615901 ATF7IP2Q5U623 682 aa9.64□□□□□ -0.87
SPTBN1-207ENST00000615901 CLEC10AQ8IUN9 316 aa9.64□□□□□ -0.87
SPTBN1-207ENST00000615901 RBBP8NLQ8NC74 664 aaPredicted RBP9.64□□□□□ -0.87
SPTBN1-207ENST00000615901 TMEM143Q96AN5 459 aa9.64□□□□□ -0.87
SPTBN1-207ENST00000615901 DHX35Q9H5Z1 703 aaKnown RBP9.64□□□□□ -0.87
SPTBN1-207ENST00000615901 TBX20Q9UMR3 447 aa9.64□□□□□ -0.87
SPTBN1-207ENST00000615901 PIN4Q9Y237 131 aaKnown RBP9.64□□□□□ -0.87
SPTBN1-207ENST00000615901 PDCLQ13371 301 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 SNX17Q15036 470 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 KLHDC7AQ5VTJ3 777 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 BTBD8Q5XKL5 378 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 RTFDC1Q9BY42 306 aaPredicted RBP9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 EHD2Q9NZN4 543 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 ESYT3A0FGR9 886 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 RRN3P2A6NIE6 340 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 LAMC2Q13753 1193 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 MMS22LQ6ZRQ5 1243 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 KAZALD1Q96I82 304 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 PCSK1NQ9UHG2 260 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 ZC3H11AO75152 810 aaKnown RBP eCLIP9.63□□□□□ -0.878e-9■■■■□ 21.9
SPTBN1-207ENST00000615901 STMN1P16949 149 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 NCF2P19878 526 aaPredicted RBP9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 PNPLA4P41247 253 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 EFHBQ8N7U6 833 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 CHMP6Q96FZ7 201 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 CYTH2Q99418 400 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 PIK3C2AO00443 1686 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 SPECC1L-ADORA2AF8WAN1 911 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 PSMD3O43242 534 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 AGXT2Q9BYV1 514 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 GMNCA6NCL1 334 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 TMCC1O94876 653 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 TPI1P60174 286 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 DGKDQ16760 1214 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 SV2CQ496J9 727 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 SYNPO2Q9UMS6 1093 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 PIK3R2O00459 728 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 TEDDM1Q5T9Z0 273 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 NLRP14Q86W24 1093 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 CATSPER3Q86XQ3 398 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 FRMD8P1Q9BZ68 369 aaPredicted RBP9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 MORC2Q9Y6X9 1032 aaPredicted RBP9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 GOLGA8MH3BSY2 632 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 HSPA9P38646 679 aaKnown RBP9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 CPT1AP50416 773 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 NOTUMQ6P988 496 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 PPHLN1Q8NEY8 458 aaKnown RBP9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 TTC17Q96AE7 1141 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 PPARGC1AQ9UBK2 798 aaKnown RBP9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 ATRNO75882 1429 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 OCRLQ01968 901 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 MTF1Q14872 753 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 FRMD8Q9BZ67 464 aaPredicted RBP9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 LMCD1Q9NZU5 365 aa9.63□□□□□ -0.87
SPTBN1-207ENST00000615901 SPAG7O75391 227 aa9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 ITIH2P19823 946 aa9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 C4orf22Q6V702 233 aa9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 CD302Q8IX05 232 aa9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 NSMCE4AQ9NXX6 385 aa9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 FHOD1Q9Y613 1164 aa9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 GALCP54803 685 aa9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 KSR1Q8IVT5 923 aa9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 DPF2Q92785 391 aa9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 RUSC1Q9BVN2 902 aa9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 TRIM4Q9C037 500 aa9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 MRGBPQ9NV56 204 aa9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 DNAJC17Q9NVM6 304 aaKnown RBP9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 SPDYE2BA6NHP3 402 aa9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 SPDYE6P0CI01 402 aa9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 SULT1E1P49888 294 aa9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 GTF2A2P52657 109 aa9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 VEPH1Q14D04 833 aa9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 GSPT2Q8IYD1 628 aaKnown RBP9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 ASAP3Q8TDY4 903 aa9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 C1orf54Q8WWF1 131 aa9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 MCEEQ96PE7 176 aa9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 LRRC37BQ96QE4 947 aa9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 RSAD1Q9HA92 442 aa9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 HBP1O60381 514 aa9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 EIF3EP60228 445 aaKnown RBP9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 ALKBH8Q96BT7 664 aaKnown RBP9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 VPS33BQ9H267 617 aa9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 HPSEQ9Y251 543 aa9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 WDR91A4D1P6 747 aa9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 BYSLQ13895 437 aaKnown RBP9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 BEND6Q5SZJ8 279 aaPredicted RBP9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 ATPAF2Q8N5M1 289 aa9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 PARD3BQ8TEW8 1205 aa9.62□□□□□ -0.87
SPTBN1-207ENST00000615901 DBR1Q9UK59 544 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms