RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 TOPORSQ9NS56 1045 aaPredicted RBP12.5□□□□□ -0.41
CDH5-208ENST00000614547 USP20Q9Y2K6 914 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 NEU2Q9Y3R4 380 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 BCL9O00512 1426 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 RPS6KA4O75676 772 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 BRD2P25440 801 aaKnown RBP12.5□□□□□ -0.41
CDH5-208ENST00000614547 RPA1P27694 616 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 RASA3Q14644 834 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 SF3B3Q15393 1217 aaKnown RBP12.5□□□□□ -0.41
CDH5-208ENST00000614547 GRAMD1BQ3KR37 738 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 C1orf146Q5VVC0 180 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 CEP128Q6ZU80 1094 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.5□□□□□ -0.41
CDH5-208ENST00000614547 UCMAQ8WVF2 138 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 THTPAQ9BU02 230 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 TRAIPQ9BWF2 469 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 ZWILCHQ9H900 591 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 C1orf112Q9NSG2 853 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 KCNG1Q9UIX4 513 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 TOPAZ1Q8N9V7 1692 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 TMEM150BA6NC51 233 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 H3BRJ5 948 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 MSH4O15457 936 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 PAEPP09466 180 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 ETS1P14921 441 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 ITIH2P19823 946 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 POLGP54098 1239 aaPredicted RBP12.49□□□□□ -0.41
CDH5-208ENST00000614547 MTMR2Q13614 643 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 KPNB1Q14974 876 aaKnown RBP12.49□□□□□ -0.41
CDH5-208ENST00000614547 PSMD6Q15008 389 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 PADI6Q6TGC4 694 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 RASGEF1CQ8N431 466 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 ATL2Q8NHH9 583 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 PIP4K2CQ8TBX8 421 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 CCDC110Q8TBZ0 833 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 MAIP1Q8WWC4 291 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 MAGEB18Q96M61 343 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 RIOX1Q9H6W3 641 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 PCDHB4Q9Y5E5 795 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 ASTN1O14525 1302 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 FAM86B1E9PN63 330 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 CES2O00748 559 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 PPP1R11O60927 126 aaPredicted RBP12.49□□□□□ -0.41
CDH5-208ENST00000614547 TRPA1O75762 1119 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 ZBTB7AO95365 584 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 EYA4O95677 639 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 FGRP09769 529 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 FAM86B2P0C5J1 330 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 CHRM1P11229 460 aaPredicted RBP12.49□□□□□ -0.41
CDH5-208ENST00000614547 ATXN3P54252 364 aaPredicted RBP12.49□□□□□ -0.41
CDH5-208ENST00000614547 SLC12A3P55017 1021 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 BTNL9Q6UXG8 535 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 ARHGAP24Q8N264 748 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 XXYLT1Q8NBI6 393 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 C1orf131Q8NDD1 294 aaKnown RBP12.49□□□□□ -0.41
CDH5-208ENST00000614547 DCCP43146 1447 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 A0A0A6YYK5 440 aaPredicted RBP12.49□□□□□ -0.41
CDH5-208ENST00000614547 B2RBV5 119 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 KIF3CO14782 793 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 HNRNPDLO14979 420 aaKnown RBP12.49□□□□□ -0.41
CDH5-208ENST00000614547 INHBAP08476 426 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 VCAM1P19320 739 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 RPA3P35244 121 aaPredicted RBP12.49□□□□□ -0.41
CDH5-208ENST00000614547 PRKCIP41743 596 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 PEX5P50542 639 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 CACNA2D1P54289 1103 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 GPSM2P81274 684 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 DEUP1Q05D60 604 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 LAMB3Q13751 1172 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 MPP2Q14168 576 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 CFAP36Q96G28 342 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 NACC1Q96RE7 527 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 EBF2Q9HAK2 575 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 GPRC5CQ9NQ84 441 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 SLC5A4Q9NY91 659 aa12.49□□□□□ -0.41
CDH5-208ENST00000614547 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.48□□□□□ -0.41
CDH5-208ENST00000614547 ESYT2A0FGR8 921 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 hCG_1984214I3L0E3 225 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 FOXN2P32314 431 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 PSMC4P43686 418 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 COG7P83436 770 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 RGS9BPQ6ZS82 235 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 ZNF713Q8N859 430 aaPredicted RBP12.48□□□□□ -0.41
CDH5-208ENST00000614547 SCG3Q8WXD2 468 aaKnown RBP12.48□□□□□ -0.41
CDH5-208ENST00000614547 LXNQ9BS40 222 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 GLT8D2Q9H1C3 349 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 CNOT7Q9UIV1 285 aaKnown RBP12.48□□□□□ -0.41
CDH5-208ENST00000614547 TRAF3IP3Q9Y228 551 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 LMO7Q8WWI1 1683 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 F5H6K3 240 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 ATP5HO75947 161 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 RRM1P23921 792 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 ALDH18A1P54886 795 aaKnown RBP12.48□□□□□ -0.41
CDH5-208ENST00000614547 TMPRSS15P98073 1019 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 CUL3Q13618 768 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 NOP9Q86U38 636 aaKnown RBP12.48□□□□□ -0.41
CDH5-208ENST00000614547 RHPN2Q8IUC4 686 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 EIF1ADQ8N9N8 165 aaKnown RBP12.48□□□□□ -0.41
CDH5-208ENST00000614547 MAGEC3Q8TD91 643 aa12.48□□□□□ -0.41
CDH5-208ENST00000614547 RHBDL2Q9NX52 303 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms