RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 MAPK4P31152 587 aa10.69□□□□□ -0.7
GGA3-221ENST00000614198 GTF2BQ00403 316 aa10.69□□□□□ -0.7
GGA3-221ENST00000614198 PRKCZQ05513 592 aa10.69□□□□□ -0.7
GGA3-221ENST00000614198 PPP3CAQ08209 521 aa10.69□□□□□ -0.7
GGA3-221ENST00000614198 MAP2K5Q13163 448 aa10.69□□□□□ -0.7
GGA3-221ENST00000614198 LACTB2Q53H82 288 aaPredicted RBP10.69□□□□□ -0.7
GGA3-221ENST00000614198 RNF149Q8NC42 400 aa10.69□□□□□ -0.7
GGA3-221ENST00000614198 DNAJC7Q99615 494 aa10.69□□□□□ -0.7
GGA3-221ENST00000614198 ACP6Q9NPH0 428 aa10.69□□□□□ -0.7
GGA3-221ENST00000614198 STIM2Q9P246 746 aa10.69□□□□□ -0.7
GGA3-221ENST00000614198 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.69□□□□□ -0.7
GGA3-221ENST00000614198 UNCXA6NJT0 531 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 SLC26A4O43511 780 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 TNFAIP2Q03169 654 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 GLE1Q53GS7 698 aaKnown RBP10.68□□□□□ -0.7
GGA3-221ENST00000614198 EFCAB12Q6NXP0 572 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 OR6J1Q8NGC5 347 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 CCDC42Q96M95 316 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 FAM213AQ9BRX8 229 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 KCND2Q9NZV8 630 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 EME2A4GXA9 379 aaPredicted RBP10.68□□□□□ -0.7
GGA3-221ENST00000614198 EIF3DO15371 548 aaKnown RBP eCLIP10.68□□□□□ -0.7
GGA3-221ENST00000614198 AKR1B10O60218 316 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 AP1G2O75843 785 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 PGK1P00558 417 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 DLATP10515 647 aaKnown RBP10.68□□□□□ -0.7
GGA3-221ENST00000614198 XRCC5P13010 732 aaKnown RBP10.68□□□□□ -0.7
GGA3-221ENST00000614198 RWDD2BP57060 319 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 EDRF1Q3B7T1 1238 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 C1orf220Q5T0J3 134 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 C8orf74Q6P047 294 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 FAM114A1Q8IWE2 563 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 ZNF784Q8NCA9 323 aaPredicted RBP10.68□□□□□ -0.7
GGA3-221ENST00000614198 SPATA4Q8NEY3 305 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 RDM1Q8NG50 284 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 CCDC26Q8TAB7 109 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 CAPNS2Q96L46 248 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 KIF9Q9HAQ2 790 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 SNX12Q9UMY4 172 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 DIS3Q9Y2L1 958 aaKnown RBP10.68□□□□□ -0.7
GGA3-221ENST00000614198 UNC80Q8N2C7 3258 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 HMGB1P1B2RPK0 211 aaPredicted RBP10.68□□□□□ -0.7
GGA3-221ENST00000614198 PRLRP16471 622 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 KLRC1P26715 233 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 TNFSF9P41273 254 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 FLT3LGP49771 235 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 VAV2P52735 878 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 LMBR1Q8WVP7 490 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 POMGNT1Q8WZA1 660 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 TRIB2Q92519 343 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 P3H4Q92791 437 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 KAT5Q92993 513 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 THOC1Q96FV9 657 aaKnown RBP10.68□□□□□ -0.7
GGA3-221ENST00000614198 ATP6V1G3Q96LB4 118 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 ZFYVE28Q9HCC9 887 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 HOMER3Q9NSC5 361 aa10.68□□□□□ -0.7
GGA3-221ENST00000614198 H3BRB1 525 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 TOMM70O94826 608 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 ZNF865P0CJ78 1059 aaPredicted RBP10.67□□□□□ -0.7
GGA3-221ENST00000614198 SCTRP47872 440 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 NLRP11P59045 1033 aaKnown RBP10.67□□□□□ -0.7
GGA3-221ENST00000614198 LAMTOR4Q0VGL1 99 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 SPRED3Q2MJR0 410 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 HS2ST1Q7LGA3 356 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 ZC3H3Q8IXZ2 948 aaKnown RBP10.67□□□□□ -0.7
GGA3-221ENST00000614198 TMEM192Q8IY95 271 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 SPDL1Q96EA4 605 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 ACCSQ96QU6 501 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 PI4K2AQ9BTU6 479 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 NIFKQ9BYG3 293 aaKnown RBP10.67□□□□□ -0.7
GGA3-221ENST00000614198 LACRTQ9GZZ8 138 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 TUT1Q9H6E5 874 aaKnown RBP10.67□□□□□ -0.7
GGA3-221ENST00000614198 EBF2Q9HAK2 575 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 CDHR5Q9HBB8 845 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 DMAC2Q9NW81 257 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 RNF186Q9NXI6 227 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 PTPRJQ12913 1337 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 RCCD1A6NED2 376 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 TACC1O75410 805 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 DNAJC8O75937 253 aaPredicted RBP10.67□□□□□ -0.7
GGA3-221ENST00000614198 GH1P01241 217 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 MMP3P08254 477 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 ARL2P36404 184 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 FAM160B1Q5W0V3 765 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 DPY19L2P1Q6NXN4 242 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 MREGQ8N565 214 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 ATP8B4Q8TF62 1192 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 TBC1D31Q96DN5 1066 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 CEP63Q96MT8 703 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 FAM49AQ9H0Q0 323 aaPredicted RBP10.67□□□□□ -0.7
GGA3-221ENST00000614198 CXCL16Q9H2A7 254 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 XIRP2A4UGR9 3374 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 LOXHD1Q8IVV2 1947 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 GMNCA6NCL1 334 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 SLC15A5A6NIM6 579 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 PON1P27169 355 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 RAPGEF1Q13905 1077 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 DEFB115Q30KQ5 88 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 ACCSLQ4AC99 568 aa10.67□□□□□ -0.7
GGA3-221ENST00000614198 MARCH8Q5T0T0 291 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms