RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 KRT13P13646 458 aa12.42□□□□□ -0.42
SLIRP-212ENST00000613856 SELPP16109 830 aa12.42□□□□□ -0.42
SLIRP-212ENST00000613856 ARF4P18085 180 aaPredicted RBP12.42□□□□□ -0.42
SLIRP-212ENST00000613856 POU5F1Q01860 360 aaKnown RBP12.42□□□□□ -0.42
SLIRP-212ENST00000613856 ZP2Q05996 745 aa12.42□□□□□ -0.42
SLIRP-212ENST00000613856 BFSP1Q12934 665 aa12.42□□□□□ -0.42
SLIRP-212ENST00000613856 KYAT1Q16773 422 aa12.42□□□□□ -0.42
SLIRP-212ENST00000613856 ZNF568Q3ZCX4 644 aa12.42□□□□□ -0.42
SLIRP-212ENST00000613856 CNKSR3Q6P9H4 555 aa12.42□□□□□ -0.42
SLIRP-212ENST00000613856 CATSPER4Q7RTX7 472 aa12.42□□□□□ -0.42
SLIRP-212ENST00000613856 VSTM4Q8IW00 320 aa12.42□□□□□ -0.42
SLIRP-212ENST00000613856 TMEM40Q8WWA1 233 aa12.42□□□□□ -0.42
SLIRP-212ENST00000613856 SLC35C1Q96A29 364 aa12.42□□□□□ -0.42
SLIRP-212ENST00000613856 SAAL1Q96ER3 474 aa12.42□□□□□ -0.42
SLIRP-212ENST00000613856 CCDC51Q96ER9 411 aa12.42□□□□□ -0.42
SLIRP-212ENST00000613856 ZBTB45Q96K62 511 aaPredicted RBP12.42□□□□□ -0.42
SLIRP-212ENST00000613856 MFSD14AQ96MC6 490 aa12.42□□□□□ -0.42
SLIRP-212ENST00000613856 RAD9AQ99638 391 aa12.42□□□□□ -0.42
SLIRP-212ENST00000613856 MSTO1Q9BUK6 570 aa12.42□□□□□ -0.42
SLIRP-212ENST00000613856 CDT1Q9H211 546 aa12.42□□□□□ -0.42
SLIRP-212ENST00000613856 NDST4Q9H3R1 872 aa12.42□□□□□ -0.42
SLIRP-212ENST00000613856 PDZD7Q9H5P4 517 aa12.42□□□□□ -0.42
SLIRP-212ENST00000613856 CDHR5Q9HBB8 845 aa12.42□□□□□ -0.42
SLIRP-212ENST00000613856 AGPAT5Q9NUQ2 364 aa12.42□□□□□ -0.42
SLIRP-212ENST00000613856 USP20Q9Y2K6 914 aa12.42□□□□□ -0.42
SLIRP-212ENST00000613856 A0A1B0GUA9 196 aa12.41□□□□□ -0.42
SLIRP-212ENST00000613856 OGTO15294 1046 aa12.41□□□□□ -0.42
SLIRP-212ENST00000613856 TEX33O43247 280 aa12.41□□□□□ -0.42
SLIRP-212ENST00000613856 CHRNA1P02708 482 aa12.41□□□□□ -0.42
SLIRP-212ENST00000613856 IRS1P35568 1242 aa12.41□□□□□ -0.42
SLIRP-212ENST00000613856 THPOP40225 353 aa12.41□□□□□ -0.42
SLIRP-212ENST00000613856 CYP24A1Q07973 514 aa12.41□□□□□ -0.42
SLIRP-212ENST00000613856 NCBP1Q09161 790 aaKnown RBP12.41□□□□□ -0.42
SLIRP-212ENST00000613856 TMEM132AQ24JP5 1023 aa12.41□□□□□ -0.42
SLIRP-212ENST00000613856 DCAF4L1Q3SXM0 396 aa12.41□□□□□ -0.42
SLIRP-212ENST00000613856 TCEAL5Q5H9L2 206 aa12.41□□□□□ -0.42
SLIRP-212ENST00000613856 FKBP15Q5T1M5 1219 aa12.41□□□□□ -0.42
SLIRP-212ENST00000613856 ZNF618Q5T7W0 954 aa12.41□□□□□ -0.42
SLIRP-212ENST00000613856 EEF1DP3Q658K8 133 aa12.41□□□□□ -0.42
SLIRP-212ENST00000613856 CRELD2Q6UXH1 353 aaPredicted RBP12.41□□□□□ -0.42
SLIRP-212ENST00000613856 EP400NLQ6ZTU2 488 aa12.41□□□□□ -0.42
SLIRP-212ENST00000613856 APBB1IPQ7Z5R6 666 aaPredicted RBP12.41□□□□□ -0.42
SLIRP-212ENST00000613856 USP37Q86T82 979 aa12.41□□□□□ -0.42
SLIRP-212ENST00000613856 CBWD2Q8IUF1 395 aa12.41□□□□□ -0.42
SLIRP-212ENST00000613856 CREBRFQ8IUR6 639 aa12.41□□□□□ -0.42
SLIRP-212ENST00000613856 BRSK2Q8IWQ3 736 aa12.41□□□□□ -0.42
SLIRP-212ENST00000613856 KMT2EQ8IZD2 1858 aa12.41□□□□□ -0.42
SLIRP-212ENST00000613856 CCDC155Q8N6L0 562 aa12.41□□□□□ -0.42
SLIRP-212ENST00000613856 ZSWIM2Q8NEG5 633 aa12.41□□□□□ -0.42
SLIRP-212ENST00000613856 FBXO22Q8NEZ5 403 aa12.41□□□□□ -0.42
SLIRP-212ENST00000613856 CAGE1Q8TC20 777 aa12.41□□□□□ -0.42
SLIRP-212ENST00000613856 TMC2Q8TDI7 906 aa12.41□□□□□ -0.42
SLIRP-212ENST00000613856 ERGIC2Q96RQ1 377 aa12.41□□□□□ -0.42
SLIRP-212ENST00000613856 GINS2Q9Y248 185 aa12.41□□□□□ -0.42
SLIRP-212ENST00000613856 SQORQ9Y6N5 450 aa12.41□□□□□ -0.42
SLIRP-212ENST00000613856 GTPBP10A4D1E9 387 aaKnown RBP12.4□□□□□ -0.42
SLIRP-212ENST00000613856 GOLGA8IPA6NC78 632 aa12.4□□□□□ -0.42
SLIRP-212ENST00000613856 ZNF233A6NK53 670 aa12.4□□□□□ -0.42
SLIRP-212ENST00000613856 GOLGA8JA6NMD2 632 aa12.4□□□□□ -0.42
SLIRP-212ENST00000613856 PMM2O15305 246 aa12.4□□□□□ -0.42
SLIRP-212ENST00000613856 CSDE1O75534 798 aaKnown RBP12.4□□□□□ -0.42
SLIRP-212ENST00000613856 AFPP02771 609 aaKnown RBP12.4□□□□□ -0.42
SLIRP-212ENST00000613856 ALADP13716 330 aa12.4□□□□□ -0.42
SLIRP-212ENST00000613856 HOXA11P31270 313 aaPredicted RBP12.4□□□□□ -0.42
SLIRP-212ENST00000613856 DEKP35659 375 aaKnown RBP12.4□□□□□ -0.42
SLIRP-212ENST00000613856 MATR3P43243 847 aaKnown RBP eCLIP12.4□□□□□ -0.42
SLIRP-212ENST00000613856 VAMP7P51809 220 aa12.4□□□□□ -0.42
SLIRP-212ENST00000613856 UBXN1Q04323 297 aa12.4□□□□□ -0.42
SLIRP-212ENST00000613856 DLX2Q07687 328 aaPredicted RBP12.4□□□□□ -0.42
SLIRP-212ENST00000613856 KCNH2Q12809 1159 aa12.4□□□□□ -0.42
SLIRP-212ENST00000613856 PSMD6Q15008 389 aa12.4□□□□□ -0.42
SLIRP-212ENST00000613856 CLUL1Q15846 466 aa12.4□□□□□ -0.42
SLIRP-212ENST00000613856 DCAF17Q5H9S7 520 aaPredicted RBP12.4□□□□□ -0.42
SLIRP-212ENST00000613856 IER5LQ5T953 404 aa12.4□□□□□ -0.42
SLIRP-212ENST00000613856 SPECC1LQ69YQ0 1117 aa12.4□□□□□ -0.42
SLIRP-212ENST00000613856 NOTUMQ6P988 496 aa12.4□□□□□ -0.42
SLIRP-212ENST00000613856 FAM228AQ86W67 206 aa12.4□□□□□ -0.42
SLIRP-212ENST00000613856 PRSS33Q8NF86 280 aa12.4□□□□□ -0.42
SLIRP-212ENST00000613856 ADPGKQ9BRR6 497 aa12.4□□□□□ -0.42
SLIRP-212ENST00000613856 FAM213AQ9BRX8 229 aa12.4□□□□□ -0.42
SLIRP-212ENST00000613856 TCHPQ9BT92 498 aa12.4□□□□□ -0.42
SLIRP-212ENST00000613856 RNF216Q9NWF9 866 aaPredicted RBP12.4□□□□□ -0.42
SLIRP-212ENST00000613856 IMPACTQ9P2X3 320 aa12.4□□□□□ -0.42
SLIRP-212ENST00000613856 MUTYHQ9UIF7 546 aa12.4□□□□□ -0.42
SLIRP-212ENST00000613856 CPSF3Q9UKF6 684 aaKnown RBP12.4□□□□□ -0.42
SLIRP-212ENST00000613856 C19orf67A6NJJ6 358 aa12.39□□□□□ -0.43
SLIRP-212ENST00000613856 P4HA2O15460 535 aa12.39□□□□□ -0.43
SLIRP-212ENST00000613856 STX10O60499 249 aa12.39□□□□□ -0.43
SLIRP-212ENST00000613856 N4BP1O75113 896 aaKnown RBP12.39□□□□□ -0.43
SLIRP-212ENST00000613856 CSPG5O95196 566 aa12.39□□□□□ -0.43
SLIRP-212ENST00000613856 CTSHP09668 335 aa12.39□□□□□ -0.43
SLIRP-212ENST00000613856 FGFR4P22455 802 aa12.39□□□□□ -0.43
SLIRP-212ENST00000613856 GTF2H1P32780 548 aa12.39□□□□□ -0.43
SLIRP-212ENST00000613856 LTBRP36941 435 aa12.39□□□□□ -0.43
SLIRP-212ENST00000613856 CLDN10P78369 228 aa12.39□□□□□ -0.43
SLIRP-212ENST00000613856 TRIM14Q14142 442 aa12.39□□□□□ -0.43
SLIRP-212ENST00000613856 SURF1Q15526 300 aa12.39□□□□□ -0.43
SLIRP-212ENST00000613856 EPC2Q52LR7 807 aa12.39□□□□□ -0.43
SLIRP-212ENST00000613856 FBXO47Q5MNV8 452 aa12.39□□□□□ -0.43
SLIRP-212ENST00000613856 C1orf220Q5T0J3 134 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms