RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 IFI35P80217 286 aaPredicted RBP23.44■■□□□ 1.34
POLR2J3-220ENST00000613744 ARHGAP4P98171 946 aa23.44■■□□□ 1.34
POLR2J3-220ENST00000613744 PDIA5Q14554 519 aa23.44■■□□□ 1.34
POLR2J3-220ENST00000613744 TMEM266Q2M3C6 531 aa23.44■■□□□ 1.34
POLR2J3-220ENST00000613744 ARHGEF16Q5VV41 709 aa23.44■■□□□ 1.34
POLR2J3-220ENST00000613744 RNF43Q68DV7 783 aa23.44■■□□□ 1.34
POLR2J3-220ENST00000613744 IL31RAQ8NI17 732 aa23.44■■□□□ 1.34
POLR2J3-220ENST00000613744 FBF1Q8TES7 1133 aa23.44■■□□□ 1.34
POLR2J3-220ENST00000613744 SH3TC2Q8TF17 1288 aa23.44■■□□□ 1.34
POLR2J3-220ENST00000613744 PRCCQ92733 491 aaPredicted RBP23.44■■□□□ 1.34
POLR2J3-220ENST00000613744 PRKAG3Q9UGI9 489 aa23.44■■□□□ 1.34
POLR2J3-220ENST00000613744 LCTP09848 1927 aa23.44■■□□□ 1.34
POLR2J3-220ENST00000613744 SOWAHBA6NEL2 793 aa23.44■■□□□ 1.34
POLR2J3-220ENST00000613744 STRNO43815 780 aa23.44■■□□□ 1.34
POLR2J3-220ENST00000613744 EDIL3O43854 480 aa23.44■■□□□ 1.34
POLR2J3-220ENST00000613744 GRB14Q14449 540 aa23.44■■□□□ 1.34
POLR2J3-220ENST00000613744 ZDHHC24Q6UX98 284 aa23.44■■□□□ 1.34
POLR2J3-220ENST00000613744 DYMQ7RTS9 669 aa23.44■■□□□ 1.34
POLR2J3-220ENST00000613744 SPATA21Q7Z572 469 aa23.44■■□□□ 1.34
POLR2J3-220ENST00000613744 APBB1IPQ7Z5R6 666 aaPredicted RBP23.44■■□□□ 1.34
POLR2J3-220ENST00000613744 DPP9Q86TI2 863 aa23.44■■□□□ 1.34
POLR2J3-220ENST00000613744 TLDC2A0PJX2 215 aa23.43■■□□□ 1.34
POLR2J3-220ENST00000613744 KIAA0391O15091 583 aaKnown RBP23.43■■□□□ 1.34
POLR2J3-220ENST00000613744 FGGP02679 453 aa23.43■■□□□ 1.34
POLR2J3-220ENST00000613744 ATP5DP30049 168 aa23.43■■□□□ 1.34
POLR2J3-220ENST00000613744 CTCFP49711 727 aaPredicted RBP23.43■■□□□ 1.34
POLR2J3-220ENST00000613744 FCGRTP55899 365 aa23.43■■□□□ 1.34
POLR2J3-220ENST00000613744 ACVR2BQ13705 512 aa23.43■■□□□ 1.34
POLR2J3-220ENST00000613744 SLC29A2Q14542 456 aa23.43■■□□□ 1.34
POLR2J3-220ENST00000613744 TMEM119Q4V9L6 283 aa23.43■■□□□ 1.34
POLR2J3-220ENST00000613744 DDX12PQ92771 950 aa23.43■■□□□ 1.34
POLR2J3-220ENST00000613744 GRAMD1AQ96CP6 724 aa23.43■■□□□ 1.34
POLR2J3-220ENST00000613744 MTMR9Q96QG7 549 aa23.43■■□□□ 1.34
POLR2J3-220ENST00000613744 UIMC1Q96RL1 719 aa23.43■■□□□ 1.34
POLR2J3-220ENST00000613744 PXMP2Q9NR77 195 aa23.43■■□□□ 1.34
POLR2J3-220ENST00000613744 PAPOLBQ9NRJ5 636 aaKnown RBP23.43■■□□□ 1.34
POLR2J3-220ENST00000613744 TXLNGQ9NUQ3 528 aa23.43■■□□□ 1.34
POLR2J3-220ENST00000613744 MAP3K20Q9NYL2 800 aaKnown RBP23.43■■□□□ 1.34
POLR2J3-220ENST00000613744 NCANO14594 1321 aa23.43■■□□□ 1.34
POLR2J3-220ENST00000613744 DNAJC25-GNG10A0A024R161 153 aa23.42■■□□□ 1.34
POLR2J3-220ENST00000613744 SLC37A4O43826 429 aa23.42■■□□□ 1.34
POLR2J3-220ENST00000613744 RTN3O95197 1032 aaPredicted RBP23.42■■□□□ 1.34
POLR2J3-220ENST00000613744 MYCLP12524 364 aaPredicted RBP23.42■■□□□ 1.34
POLR2J3-220ENST00000613744 RPTORQ8N122 1335 aa23.42■■□□□ 1.34
POLR2J3-220ENST00000613744 PODXLO00592 558 aa23.42■■□□□ 1.34
POLR2J3-220ENST00000613744 RASGRF2O14827 1237 aa23.42■■□□□ 1.34
POLR2J3-220ENST00000613744 ATP6V1C1P21283 382 aa23.42■■□□□ 1.34
POLR2J3-220ENST00000613744 COASYQ13057 564 aa23.42■■□□□ 1.34
POLR2J3-220ENST00000613744 KIF22Q14807 665 aa23.42■■□□□ 1.34
POLR2J3-220ENST00000613744 EDRF1Q3B7T1 1238 aa23.42■■□□□ 1.34
POLR2J3-220ENST00000613744 FAM26FQ5R3K3 315 aa23.42■■□□□ 1.34
POLR2J3-220ENST00000613744 THEMIS2Q5TEJ8 643 aa23.42■■□□□ 1.34
POLR2J3-220ENST00000613744 GALNT15Q8N3T1 639 aa23.42■■□□□ 1.34
POLR2J3-220ENST00000613744 FGD4Q96M96 766 aa23.42■■□□□ 1.34
POLR2J3-220ENST00000613744 GOLPH3Q9H4A6 298 aa23.42■■□□□ 1.34
POLR2J3-220ENST00000613744 RNPEPL1Q9HAU8 725 aa23.42■■□□□ 1.34
POLR2J3-220ENST00000613744 GABRQQ9UN88 632 aa23.42■■□□□ 1.34
POLR2J3-220ENST00000613744 RPL26L1Q9UNX3 145 aaKnown RBP23.42■■□□□ 1.34
POLR2J3-220ENST00000613744 MGAMO43451 1857 aa23.42■■□□□ 1.34
POLR2J3-220ENST00000613744 SLC15A5A6NIM6 579 aa23.41■■□□□ 1.34
POLR2J3-220ENST00000613744 CYP2B6P20813 491 aa23.41■■□□□ 1.34
POLR2J3-220ENST00000613744 SREBF1P36956 1147 aa23.41■■□□□ 1.34
POLR2J3-220ENST00000613744 MAPK7Q13164 816 aa23.41■■□□□ 1.34
POLR2J3-220ENST00000613744 AUHQ13825 339 aaKnown RBP23.41■■□□□ 1.34
POLR2J3-220ENST00000613744 MORN1Q5T089 497 aa23.41■■□□□ 1.34
POLR2J3-220ENST00000613744 DPY19L2P1Q6NXN4 242 aa23.41■■□□□ 1.34
POLR2J3-220ENST00000613744 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.41■■□□□ 1.34
POLR2J3-220ENST00000613744 JAMLQ86YT9 394 aa23.41■■□□□ 1.34
POLR2J3-220ENST00000613744 NPLOC4Q8TAT6 608 aa23.41■■□□□ 1.34
POLR2J3-220ENST00000613744 DYDC1Q8WWB3 177 aa23.41■■□□□ 1.34
POLR2J3-220ENST00000613744 ITFG2Q969R8 447 aa23.41■■□□□ 1.34
POLR2J3-220ENST00000613744 DDX25Q9UHL0 483 aaKnown RBP23.41■■□□□ 1.34
POLR2J3-220ENST00000613744 DDX3YO15523 660 aaKnown RBP23.4■■□□□ 1.34
POLR2J3-220ENST00000613744 FKTNO75072 461 aa23.4■■□□□ 1.34
POLR2J3-220ENST00000613744 AP1G2O75843 785 aa23.4■■□□□ 1.34
POLR2J3-220ENST00000613744 CALB2P22676 271 aa23.4■■□□□ 1.34
POLR2J3-220ENST00000613744 PGM5Q15124 567 aa23.4■■□□□ 1.34
POLR2J3-220ENST00000613744 ABRAQ8N0Z2 381 aa23.4■■□□□ 1.34
POLR2J3-220ENST00000613744 AGGF1Q8N302 714 aaeCLIP23.4■■□□□ 1.34
POLR2J3-220ENST00000613744 SAMD3Q8N6K7 520 aa23.4■■□□□ 1.34
POLR2J3-220ENST00000613744 NSUN6Q8TEA1 469 aaKnown RBP23.4■■□□□ 1.34
POLR2J3-220ENST00000613744 NUDT12Q9BQG2 462 aa23.4■■□□□ 1.34
POLR2J3-220ENST00000613744 PDCD2LQ9BRP1 358 aa23.4■■□□□ 1.34
POLR2J3-220ENST00000613744 ASB3Q9Y575 518 aa23.4■■□□□ 1.34
POLR2J3-220ENST00000613744 POTEFA5A3E0 1075 aa23.4■■□□□ 1.34
POLR2J3-220ENST00000613744 UNC5CO95185 931 aa23.4■■□□□ 1.34
POLR2J3-220ENST00000613744 RARGP13631 454 aa23.4■■□□□ 1.34
POLR2J3-220ENST00000613744 ZNF76P36508 570 aa23.4■■□□□ 1.34
POLR2J3-220ENST00000613744 ZNF792Q3KQV3 632 aa23.4■■□□□ 1.34
POLR2J3-220ENST00000613744 CYP2W1Q8TAV3 490 aa23.4■■□□□ 1.34
POLR2J3-220ENST00000613744 TRIM31Q9BZY9 425 aa23.4■■□□□ 1.34
POLR2J3-220ENST00000613744 GJD2Q9UKL4 321 aa23.4■■□□□ 1.34
POLR2J3-220ENST00000613744 STK38LQ9Y2H1 464 aa23.4■■□□□ 1.34
POLR2J3-220ENST00000613744 A8MUI8 341 aa23.39■■□□□ 1.34
POLR2J3-220ENST00000613744 UCHL3P15374 230 aa23.39■■□□□ 1.34
POLR2J3-220ENST00000613744 ACADSP16219 412 aa23.39■■□□□ 1.34
POLR2J3-220ENST00000613744 IFNAR2P48551 515 aa23.39■■□□□ 1.34
POLR2J3-220ENST00000613744 PLTPP55058 493 aa23.39■■□□□ 1.34
POLR2J3-220ENST00000613744 KCNH2Q12809 1159 aa23.39■■□□□ 1.34
POLR2J3-220ENST00000613744 MAP2K5Q13163 448 aa23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms