RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 SV2AQ7L0J3 742 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 IRF2BP2Q7Z5L9 587 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 SRGAP1Q7Z6B7 1085 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 ZNF784Q8NCA9 323 aaPredicted RBP9.64□□□□□ -0.87
CCDC47-207ENST00000612558 FBXL13Q8NEE6 735 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 NLRP7Q8WX94 980 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 ZNF592Q92610 1267 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 ZNF668Q96K58 619 aaPredicted RBP9.64□□□□□ -0.87
CCDC47-207ENST00000612558 POP1Q99575 1024 aaKnown RBP9.64□□□□□ -0.87
CCDC47-207ENST00000612558 MINDY3Q9H8M7 445 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 SPC25Q9HBM1 224 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 PTPRHQ9HD43 1115 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 LZTFL1Q9NQ48 299 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 RNF186Q9NXI6 227 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 RBAKQ9NYW8 714 aaPredicted RBP9.64□□□□□ -0.87
CCDC47-207ENST00000612558 GMPR2Q9P2T1 348 aaKnown RBP9.64□□□□□ -0.87
CCDC47-207ENST00000612558 SLC27A5Q9Y2P5 690 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 REXO2Q9Y3B8 237 aaKnown RBP9.64□□□□□ -0.87
CCDC47-207ENST00000612558 R3HCC1Q9Y3T6 440 aaKnown RBP9.64□□□□□ -0.87
CCDC47-207ENST00000612558 ZSWIM8A7E2V4 1837 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 TULP1O00294 542 aaPredicted RBP9.63□□□□□ -0.87
CCDC47-207ENST00000612558 OGTO15294 1046 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 SEPT4O43236 478 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 FAM189A1O60320 539 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 C6orf222P0C671 652 aaPredicted RBP9.63□□□□□ -0.87
CCDC47-207ENST00000612558 IQCF3P0C7M6 154 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 CCDC172P0C7W6 258 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 GNAT1P11488 350 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 FERP16591 822 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 TNNI1P19237 187 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 ANXA13P27216 316 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 SOX5P35711 763 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 PRKCIP41743 596 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 NKX3-2P78367 333 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 ADAM17P78536 824 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 PURAQ00577 322 aaKnown RBP9.63□□□□□ -0.87
CCDC47-207ENST00000612558 ARID5AQ03989 594 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 DRAP1Q14919 205 aaPredicted RBP9.63□□□□□ -0.87
CCDC47-207ENST00000612558 SURF1Q15526 300 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 TMEM132AQ24JP5 1023 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 SYT10Q6XYQ8 523 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 C15orf39Q6ZRI6 1047 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 ZBTB33Q86T24 672 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 BRSK2Q8IWQ3 736 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 FAM160A2Q8N612 972 aaPredicted RBP9.63□□□□□ -0.87
CCDC47-207ENST00000612558 UPF3AQ9H1J1 476 aaKnown RBP9.63□□□□□ -0.87
CCDC47-207ENST00000612558 HAUS4Q9H6D7 363 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 PDE11AQ9HCR9 933 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 UBE2TQ9NPD8 197 aaPredicted RBP9.63□□□□□ -0.87
CCDC47-207ENST00000612558 TOPORSQ9NS56 1045 aaPredicted RBP9.63□□□□□ -0.87
CCDC47-207ENST00000612558 RAB20Q9NX57 234 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 SRRDQ9UH36 339 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 AJAP1Q9UKB5 411 aaPredicted RBP9.63□□□□□ -0.87
CCDC47-207ENST00000612558 CNTNAP2Q9UHC6 1331 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 F8VZ95 297 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 RBAK-RBAKDNI3L0D1 243 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 B4GALT5O43286 388 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 KIF5CO60282 957 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 ZC3H11AO75152 810 aaKnown RBP eCLIP9.63□□□□□ -0.87
CCDC47-207ENST00000612558 GNRH1P01148 92 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 C4BPAP04003 597 aaKnown RBP9.63□□□□□ -0.87
CCDC47-207ENST00000612558 RARBP10826 455 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 CYP2C9P11712 490 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 HARSP12081 509 aaKnown RBP9.63□□□□□ -0.87
CCDC47-207ENST00000612558 YY1P25490 414 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 ARHGAP25P42331 645 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 VEGFBP49765 207 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 AP3M2P53677 418 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 MFAP3P55082 362 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 GNG11P61952 73 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 CAP1Q01518 475 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 CYP27A1Q02318 531 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 CACNB2Q08289 660 aaPredicted RBP9.63□□□□□ -0.87
CCDC47-207ENST00000612558 AMHR2Q16671 573 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 ZNF568Q3ZCX4 644 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 ZACNQ401N2 412 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 GNASQ5JWF2 1037 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 ZBTB41Q5SVQ8 909 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 KIAA1328Q86T90 577 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 TXLNBQ8N3L3 684 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 TAS1R2Q8TE23 839 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 SEMA4DQ92854 862 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 FAM81BQ96LP2 452 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 SCLT1Q96NL6 688 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 CGRRF1Q99675 332 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 MTG1Q9BT17 334 aaPredicted RBP9.63□□□□□ -0.87
CCDC47-207ENST00000612558 FAM49AQ9H0Q0 323 aaPredicted RBP9.63□□□□□ -0.87
CCDC47-207ENST00000612558 MYO1AQ9UBC5 1043 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 CPSF3Q9UKF6 684 aaKnown RBP9.63□□□□□ -0.87
CCDC47-207ENST00000612558 PCDHA13Q9Y5I0 950 aa9.63□□□□□ -0.87
CCDC47-207ENST00000612558 A0A0U1RQJ8 604 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 C17orf102A2RUQ5 167 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 ZNF263O14978 683 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 KRT86O43790 486 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 LRRN2O75325 713 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 GFPT2O94808 682 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 MCF2P10911 925 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 TNFSF9P41273 254 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 VAV2P52735 878 aa9.62□□□□□ -0.87
CCDC47-207ENST00000612558 TERF1P54274 439 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms