RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 KCNE1P15382 129 aa13.44□□□□□ -0.26
CBWD3-208ENST00000612050 NMT1P30419 496 aaKnown RBP13.44□□□□□ -0.26
CBWD3-208ENST00000612050 DNM1Q05193 864 aaKnown RBP13.44□□□□□ -0.26
CBWD3-208ENST00000612050 ZP2Q05996 745 aa13.44□□□□□ -0.26
CBWD3-208ENST00000612050 ADALQ6DHV7 355 aa13.44□□□□□ -0.26
CBWD3-208ENST00000612050 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.44□□□□□ -0.26
CBWD3-208ENST00000612050 POMGNT1Q8WZA1 660 aa13.44□□□□□ -0.26
CBWD3-208ENST00000612050 ZBTB45Q96K62 511 aaPredicted RBP13.44□□□□□ -0.26
CBWD3-208ENST00000612050 FBXL18Q96ME1 805 aa13.44□□□□□ -0.26
CBWD3-208ENST00000612050 APOL5Q9BWW9 433 aa13.44□□□□□ -0.26
CBWD3-208ENST00000612050 ADAM7Q9H2U9 754 aa13.44□□□□□ -0.26
CBWD3-208ENST00000612050 OLFML3Q9NRN5 406 aa13.44□□□□□ -0.26
CBWD3-208ENST00000612050 FNIP2Q9P278 1114 aa13.44□□□□□ -0.26
CBWD3-208ENST00000612050 UBQLN1Q9UMX0 589 aaKnown RBP13.44□□□□□ -0.26
CBWD3-208ENST00000612050 ARHGEF37A1IGU5 675 aa13.43□□□□□ -0.26
CBWD3-208ENST00000612050 TULP1O00294 542 aaPredicted RBP13.43□□□□□ -0.26
CBWD3-208ENST00000612050 LDHAP00338 332 aaKnown RBP13.43□□□□□ -0.26
CBWD3-208ENST00000612050 CLCN4P51793 760 aa13.43□□□□□ -0.26
CBWD3-208ENST00000612050 CLCNKBP51801 687 aa13.43□□□□□ -0.26
CBWD3-208ENST00000612050 ASIC1P78348 528 aa13.43□□□□□ -0.26
CBWD3-208ENST00000612050 KCNC3Q14003 757 aa13.43□□□□□ -0.26
CBWD3-208ENST00000612050 PSMD5Q16401 504 aa13.43□□□□□ -0.26
CBWD3-208ENST00000612050 RARS2Q5T160 578 aaKnown RBP13.43□□□□□ -0.26
CBWD3-208ENST00000612050 LIN9Q5TKA1 542 aa13.43□□□□□ -0.26
CBWD3-208ENST00000612050 KIAA0319Q5VV43 1072 aa13.43□□□□□ -0.26
CBWD3-208ENST00000612050 ANKS3Q6ZW76 656 aa13.43□□□□□ -0.26
CBWD3-208ENST00000612050 ZNF720Q7Z2F6 126 aa13.43□□□□□ -0.26
CBWD3-208ENST00000612050 RNF168Q8IYW5 571 aaPredicted RBP13.43□□□□□ -0.26
CBWD3-208ENST00000612050 VN1R2Q8NFZ6 395 aa13.43□□□□□ -0.26
CBWD3-208ENST00000612050 HDAC7Q8WUI4 952 aa13.43□□□□□ -0.26
CBWD3-208ENST00000612050 RABGGTAQ92696 567 aa13.43□□□□□ -0.26
CBWD3-208ENST00000612050 FAM212AQ96EL1 285 aa13.43□□□□□ -0.26
CBWD3-208ENST00000612050 KIF12Q96FN5 646 aa13.43□□□□□ -0.26
CBWD3-208ENST00000612050 VN1R3Q9BXE9 311 aa13.43□□□□□ -0.26
CBWD3-208ENST00000612050 GPR62Q9BZJ7 368 aa13.43□□□□□ -0.26
CBWD3-208ENST00000612050 SCAND2PQ9GZW5 306 aaPredicted RBP13.43□□□□□ -0.26
CBWD3-208ENST00000612050 PLEKHA4Q9H4M7 779 aa13.43□□□□□ -0.26
CBWD3-208ENST00000612050 RXFP1Q9HBX9 757 aa13.43□□□□□ -0.26
CBWD3-208ENST00000612050 CHST7Q9NS84 486 aa13.43□□□□□ -0.26
CBWD3-208ENST00000612050 BRWD1Q9NSI6 2320 aa13.42□□□□□ -0.26
CBWD3-208ENST00000612050 TRIP11Q15643 1979 aa13.42□□□□□ -0.26
CBWD3-208ENST00000612050 H7C4K7 107 aa13.42□□□□□ -0.26
CBWD3-208ENST00000612050 PODXLO00592 558 aa13.42□□□□□ -0.26
CBWD3-208ENST00000612050 TEX28O15482 410 aa13.42□□□□□ -0.26
CBWD3-208ENST00000612050 POLR2DO15514 142 aaKnown RBP13.42□□□□□ -0.26
CBWD3-208ENST00000612050 CXCL8P10145 99 aa13.42□□□□□ -0.26
CBWD3-208ENST00000612050 EPCAMP16422 314 aa13.42□□□□□ -0.26
CBWD3-208ENST00000612050 PAX3P23760 479 aa13.42□□□□□ -0.26
CBWD3-208ENST00000612050 MCM4P33991 863 aa13.42□□□□□ -0.26
CBWD3-208ENST00000612050 RBM10P98175 930 aaKnown RBP13.42□□□□□ -0.26
CBWD3-208ENST00000612050 UPP1Q16831 310 aa13.42□□□□□ -0.26
CBWD3-208ENST00000612050 XKR4Q5GH76 650 aa13.42□□□□□ -0.26
CBWD3-208ENST00000612050 L1TD1Q5T7N2 865 aaKnown RBP13.42□□□□□ -0.26
CBWD3-208ENST00000612050 ALKAL1Q6UXT8 129 aa13.42□□□□□ -0.26
CBWD3-208ENST00000612050 CYP26C1Q6V0L0 522 aa13.42□□□□□ -0.26
CBWD3-208ENST00000612050 BEST2Q8NFU1 509 aa13.42□□□□□ -0.26
CBWD3-208ENST00000612050 LRRC15Q8TF66 581 aa13.42□□□□□ -0.26
CBWD3-208ENST00000612050 SLC22A17Q8WUG5 538 aa13.42□□□□□ -0.26
CBWD3-208ENST00000612050 PIK3R5Q8WYR1 880 aa13.42□□□□□ -0.26
CBWD3-208ENST00000612050 CCDC47Q96A33 483 aaKnown RBP13.42□□□□□ -0.26
CBWD3-208ENST00000612050 RPGRIP1Q96KN7 1286 aa13.42□□□□□ -0.26
CBWD3-208ENST00000612050 PAAF1Q9BRP4 392 aa13.42□□□□□ -0.26
CBWD3-208ENST00000612050 PIDD1Q9HB75 910 aa13.42□□□□□ -0.26
CBWD3-208ENST00000612050 MAN1C1Q9NR34 630 aa13.42□□□□□ -0.26
CBWD3-208ENST00000612050 TSHZ2Q9NRE2 1034 aa13.42□□□□□ -0.26
CBWD3-208ENST00000612050 TBC1D7Q9P0N9 293 aa13.42□□□□□ -0.26
CBWD3-208ENST00000612050 AGO2Q9UKV8 859 aaKnown RBP13.42□□□□□ -0.26
CBWD3-208ENST00000612050 PCDHA7Q9UN72 937 aa13.42□□□□□ -0.26
CBWD3-208ENST00000612050 R3HCC1Q9Y3T6 440 aaKnown RBP13.42□□□□□ -0.26
CBWD3-208ENST00000612050 A0A0B4J269 797 aa13.41□□□□□ -0.26
CBWD3-208ENST00000612050 ABLIM1O14639 778 aa13.41□□□□□ -0.26
CBWD3-208ENST00000612050 KIAA0391O15091 583 aaKnown RBP13.41□□□□□ -0.26
CBWD3-208ENST00000612050 NUCB2P80303 420 aa13.41□□□□□ -0.26
CBWD3-208ENST00000612050 POU5F1Q01860 360 aaKnown RBP13.41□□□□□ -0.26
CBWD3-208ENST00000612050 PKP1Q13835 747 aa13.41□□□□□ -0.26
CBWD3-208ENST00000612050 SEZ6Q53EL9 994 aa13.41□□□□□ -0.26
CBWD3-208ENST00000612050 ZC2HC1CQ53FD0 456 aaPredicted RBP13.41□□□□□ -0.26
CBWD3-208ENST00000612050 SYCE2Q6PIF2 218 aa13.41□□□□□ -0.26
CBWD3-208ENST00000612050 SHC4Q6S5L8 630 aa13.41□□□□□ -0.26
CBWD3-208ENST00000612050 C15orf39Q6ZRI6 1047 aa13.41□□□□□ -0.26
CBWD3-208ENST00000612050 TAS1R1Q7RTX1 841 aa13.41□□□□□ -0.26
CBWD3-208ENST00000612050 PALB2Q86YC2 1186 aa13.41□□□□□ -0.26
CBWD3-208ENST00000612050 GLYCTKQ8IVS8 523 aa13.41□□□□□ -0.26
CBWD3-208ENST00000612050 APPL2Q8NEU8 664 aa13.41□□□□□ -0.26
CBWD3-208ENST00000612050 STAMQ92783 540 aa13.41□□□□□ -0.26
CBWD3-208ENST00000612050 ACSF2Q96CM8 615 aaPredicted RBP13.41□□□□□ -0.26
CBWD3-208ENST00000612050 DNAJC19Q96DA6 116 aa13.41□□□□□ -0.26
CBWD3-208ENST00000612050 KBTBD4Q9NVX7 518 aa13.41□□□□□ -0.26
CBWD3-208ENST00000612050 CACNG4Q9UBN1 327 aa13.41□□□□□ -0.26
CBWD3-208ENST00000612050 USP25Q9UHP3 1055 aa13.41□□□□□ -0.26
CBWD3-208ENST00000612050 RCOR1Q9UKL0 485 aa13.41□□□□□ -0.26
CBWD3-208ENST00000612050 KCNH3Q9ULD8 1083 aa13.41□□□□□ -0.26
CBWD3-208ENST00000612050 REV3LO60673 3130 aa13.41□□□□□ -0.26
CBWD3-208ENST00000612050 GOLGA6L4A6NEF3 574 aa13.4□□□□□ -0.26
CBWD3-208ENST00000612050 F8W810 466 aa13.4□□□□□ -0.26
CBWD3-208ENST00000612050 SYN3O14994 580 aa13.4□□□□□ -0.26
CBWD3-208ENST00000612050 DCXO43602 365 aa13.4□□□□□ -0.26
CBWD3-208ENST00000612050 LILRB3O75022 631 aa13.4□□□□□ -0.26
CBWD3-208ENST00000612050 CYP3A5P20815 502 aa13.4□□□□□ -0.26
CBWD3-208ENST00000612050 NAB2Q15742 525 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms