RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 ZNF592Q92610 1267 aa13.27□□□□□ -0.28
CBWD1-220ENST00000612045 TATDN2Q93075 761 aa13.27□□□□□ -0.28
CBWD1-220ENST00000612045 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.27□□□□□ -0.28
CBWD1-220ENST00000612045 MTMR12Q9C0I1 747 aa13.27□□□□□ -0.28
CBWD1-220ENST00000612045 HMX1Q9NP08 348 aaPredicted RBP13.27□□□□□ -0.28
CBWD1-220ENST00000612045 ADAMTS1Q9UHI8 967 aa13.27□□□□□ -0.28
CBWD1-220ENST00000612045 TSKSQ9UJT2 592 aa13.27□□□□□ -0.28
CBWD1-220ENST00000612045 TRIM17Q9Y577 477 aa13.27□□□□□ -0.28
CBWD1-220ENST00000612045 PCDHA13Q9Y5I0 950 aa13.27□□□□□ -0.28
CBWD1-220ENST00000612045 GRIN2DO15399 1336 aa13.27□□□□□ -0.29
CBWD1-220ENST00000612045 PHACTR2O75167 634 aa13.27□□□□□ -0.29
CBWD1-220ENST00000612045 CABYRO75952 493 aa13.27□□□□□ -0.29
CBWD1-220ENST00000612045 ABL1P00519 1130 aa13.27□□□□□ -0.29
CBWD1-220ENST00000612045 ANXA13P27216 316 aa13.27□□□□□ -0.29
CBWD1-220ENST00000612045 VAV2P52735 878 aa13.27□□□□□ -0.29
CBWD1-220ENST00000612045 GCNT1Q02742 428 aa13.27□□□□□ -0.29
CBWD1-220ENST00000612045 NCOA4Q13772 614 aa13.27□□□□□ -0.29
CBWD1-220ENST00000612045 DCAF4L1Q3SXM0 396 aa13.27□□□□□ -0.29
CBWD1-220ENST00000612045 WDR44Q5JSH3 913 aa13.27□□□□□ -0.29
CBWD1-220ENST00000612045 LHX8Q68G74 356 aa13.27□□□□□ -0.29
CBWD1-220ENST00000612045 NOTUMQ6P988 496 aa13.27□□□□□ -0.29
CBWD1-220ENST00000612045 SLC27A1Q6PCB7 646 aa13.27□□□□□ -0.29
CBWD1-220ENST00000612045 SYT10Q6XYQ8 523 aa13.27□□□□□ -0.29
CBWD1-220ENST00000612045 ZNF662Q6ZS27 426 aa13.27□□□□□ -0.29
CBWD1-220ENST00000612045 TRAPPC11Q7Z392 1133 aa13.27□□□□□ -0.29
CBWD1-220ENST00000612045 SERINC5Q86VE9 423 aa13.27□□□□□ -0.29
CBWD1-220ENST00000612045 EFCAB13Q8IY85 973 aa13.27□□□□□ -0.29
CBWD1-220ENST00000612045 ELMO3Q96BJ8 720 aa13.27□□□□□ -0.29
CBWD1-220ENST00000612045 IFIH1Q9BYX4 1025 aaKnown RBP13.27□□□□□ -0.29
CBWD1-220ENST00000612045 C1orf112Q9NSG2 853 aa13.27□□□□□ -0.29
CBWD1-220ENST00000612045 TFR2Q9UP52 801 aa13.27□□□□□ -0.29
CBWD1-220ENST00000612045 PTCH2Q9Y6C5 1203 aa13.27□□□□□ -0.29
CBWD1-220ENST00000612045 ANK1P16157 1881 aa13.26□□□□□ -0.29
CBWD1-220ENST00000612045 A0A087X0T9 212 aa13.26□□□□□ -0.29
CBWD1-220ENST00000612045 RCCD1A6NED2 376 aa13.26□□□□□ -0.29
CBWD1-220ENST00000612045 LACTBL1A8MY62 500 aa13.26□□□□□ -0.29
CBWD1-220ENST00000612045 MEFVO15553 781 aaPredicted RBP13.26□□□□□ -0.29
CBWD1-220ENST00000612045 FAM228BP0C875 321 aa13.26□□□□□ -0.29
CBWD1-220ENST00000612045 AXLP30530 894 aa13.26□□□□□ -0.29
CBWD1-220ENST00000612045 MAGEA1P43355 309 aa13.26□□□□□ -0.29
CBWD1-220ENST00000612045 ACLYP53396 1101 aa13.26□□□□□ -0.29
CBWD1-220ENST00000612045 GNG11P61952 73 aa13.26□□□□□ -0.29
CBWD1-220ENST00000612045 MRPS6P82932 125 aaKnown RBP13.26□□□□□ -0.29
CBWD1-220ENST00000612045 TFAMQ00059 246 aaKnown RBP13.26□□□□□ -0.29
CBWD1-220ENST00000612045 ENOSF1Q7L5Y1 443 aa13.26□□□□□ -0.29
CBWD1-220ENST00000612045 APBB1IPQ7Z5R6 666 aaPredicted RBP13.26□□□□□ -0.29
CBWD1-220ENST00000612045 RSPH3Q86UC2 560 aa13.26□□□□□ -0.29
CBWD1-220ENST00000612045 FAM71AQ8IYT1 594 aa13.26□□□□□ -0.29
CBWD1-220ENST00000612045 KIF18AQ8NI77 898 aa13.26□□□□□ -0.29
CBWD1-220ENST00000612045 SHC3Q92529 594 aa13.26□□□□□ -0.29
CBWD1-220ENST00000612045 FAM81BQ96LP2 452 aa13.26□□□□□ -0.29
CBWD1-220ENST00000612045 BEGAINQ9BUH8 593 aa13.26□□□□□ -0.29
CBWD1-220ENST00000612045 CELF4Q9BZC1 486 aaKnown RBP13.26□□□□□ -0.29
CBWD1-220ENST00000612045 IRX2Q9BZI1 471 aaPredicted RBP13.26□□□□□ -0.29
CBWD1-220ENST00000612045 LACRTQ9GZZ8 138 aa13.26□□□□□ -0.29
CBWD1-220ENST00000612045 MROH7Q68CQ1 1323 aa13.26□□□□□ -0.29
CBWD1-220ENST00000612045 M0QZ92 97 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 KIF5CO60282 957 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 NPTXRO95502 500 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 TMEM191BP0C7N4 346 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 GRM5P41594 1212 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 SLC10A6Q3KNW5 377 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 CCDC122Q5T0U0 273 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 SCARA3Q6AZY7 606 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 SPOPLQ6IQ16 392 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 VPS36Q86VN1 386 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 WNT8BQ93098 351 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 JAKMIP2Q96AA8 810 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 ANKRD36BP1Q96IX9 119 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 ACAP3Q96P50 834 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 ASB7Q9H672 318 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 APOBEC3GQ9HC16 384 aaKnown RBP13.25□□□□□ -0.29
CBWD1-220ENST00000612045 TRIM10Q9UDY6 481 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 DNAI1Q9UI46 699 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 MOXD2PA6NHM9 499 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 KRT86O43790 486 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 CST3P01034 146 aaPredicted RBP13.25□□□□□ -0.29
CBWD1-220ENST00000612045 TNNC2P02585 160 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 RPLP2P05387 115 aaKnown RBP13.25□□□□□ -0.29
CBWD1-220ENST00000612045 USP8P40818 1118 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 NOP14P78316 857 aaKnown RBP13.25□□□□□ -0.29
CBWD1-220ENST00000612045 KIF5AQ12840 1032 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 ITGA7Q13683 1181 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 BMS1Q14692 1282 aaKnown RBP13.25□□□□□ -0.29
CBWD1-220ENST00000612045 PTGISQ16647 500 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 RPAINQ86UA6 219 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 SYT11Q9BT88 431 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 EIF2AQ9BY44 585 aaKnown RBP13.25□□□□□ -0.29
CBWD1-220ENST00000612045 TSGA10Q9BZW7 698 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 GUCA1BQ9UMX6 200 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 PIN4Q9Y237 131 aaKnown RBP13.25□□□□□ -0.29
CBWD1-220ENST00000612045 R3HCC1Q9Y3T6 440 aaKnown RBP13.25□□□□□ -0.29
CBWD1-220ENST00000612045 PAXBP1Q9Y5B6 917 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 TRPV2Q9Y5S1 764 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 CDY2AQ9Y6F7 541 aa13.25□□□□□ -0.29
CBWD1-220ENST00000612045 FANCGO15287 622 aa13.24□□□□□ -0.29
CBWD1-220ENST00000612045 ASS1P00966 412 aaKnown RBP13.24□□□□□ -0.29
CBWD1-220ENST00000612045 NFICP08651 508 aa13.24□□□□□ -0.29
CBWD1-220ENST00000612045 JADE1Q6IE81 842 aa13.24□□□□□ -0.29
CBWD1-220ENST00000612045 FAM228AQ86W67 206 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms