RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 ZNF568Q3ZCX4 644 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 SCYL2Q6P3W7 929 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 ZNF677Q86XU0 584 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 DAW1Q8N136 415 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 C1orf131Q8NDD1 294 aaKnown RBP6.79□□□□□ -1.32
SNX13-213ENST00000611725 C18orf8Q96DM3 657 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 SEMA4AQ9H3S1 761 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 SIX2Q9NPC8 291 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 PXMP2Q9NR77 195 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 ANKRD63C9JTQ0 380 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 TOM1L1O75674 476 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 ECM2O94769 699 aaPredicted RBP6.79□□□□□ -1.32
SNX13-213ENST00000611725 COILP38432 576 aaPredicted RBP6.79□□□□□ -1.32
SNX13-213ENST00000611725 IREB2P48200 963 aaKnown RBP6.79□□□□□ -1.32
SNX13-213ENST00000611725 IL9RQ01113 521 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 ANO5Q75V66 913 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 TMC3Q7Z5M5 1100 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 RBM15Q96T37 977 aaKnown RBP eCLIP6.79□□□□□ -1.324e-7■■□□□ 11.6
SNX13-213ENST00000611725 SH3GL2Q99962 352 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 ELAC2Q9BQ52 826 aaKnown RBP6.79□□□□□ -1.32
SNX13-213ENST00000611725 MRPL4Q9BYD3 311 aaKnown RBP6.79□□□□□ -1.32
SNX13-213ENST00000611725 NIF3L1Q9GZT8 377 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 ST6GALNAC4Q9H4F1 302 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 SRRM3A6NNA2 597 aaPredicted RBP6.78□□□□□ -1.32
SNX13-213ENST00000611725 PHF20L1A8MW92 1017 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 TJP3O95049 919 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 TNFRSF8P28908 595 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 HSD17B4P51659 736 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 CCDC38Q502W7 563 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 IZUMO3Q5VZ72 239 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 PALM2Q8IXS6 379 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 CHST13Q8NET6 341 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 CYFIP2Q96F07 1278 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 OTUD5Q96G74 571 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 FAM84AQ96KN4 292 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 TRIM6Q9C030 488 aaPredicted RBP6.78□□□□□ -1.32
SNX13-213ENST00000611725 ACTR5Q9H9F9 607 aaPredicted RBP6.78□□□□□ -1.32
SNX13-213ENST00000611725 STRIP2Q9ULQ0 834 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 TTC7AQ9ULT0 858 aaPredicted RBP6.78□□□□□ -1.32
SNX13-213ENST00000611725 DUOX1Q9NRD9 1551 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 PARP4Q9UKK3 1724 aaKnown RBP6.78□□□□□ -1.32
SNX13-213ENST00000611725 OATP04181 439 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 GTF2H1P32780 548 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 RFC5P40937 340 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 MARCKSL1P49006 195 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 YWHAGP61981 247 aaKnown RBP eCLIP6.78□□□□□ -1.32
SNX13-213ENST00000611725 NFIL3Q16649 462 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 SLC47A2Q86VL8 602 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 FAM71AQ8IYT1 594 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 PRELID2Q8N945 189 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 CRYGNQ8WXF5 182 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 ATG4AQ8WYN0 398 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 TATDN2Q93075 761 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 TRIM7Q9C029 511 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 SAYSD1Q9NPB0 183 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 AGPSO00116 658 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 SGK1O00141 431 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 EDIL3O43854 480 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 MRPS9P82933 396 aaKnown RBP6.78□□□□□ -1.32
SNX13-213ENST00000611725 SKOR1P84550 965 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 LGSNQ5TDP6 509 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 PPP1R21Q6ZMI0 780 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 ZNF473Q8WTR7 871 aaKnown RBP6.78□□□□□ -1.32
SNX13-213ENST00000611725 KLHL29Q96CT2 875 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 SNF8Q96H20 258 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 MLXIPLQ9NP71 852 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 USP20Q9Y2K6 914 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 PROSCO94903 275 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 PRKCBP05771 671 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 TFDP2Q14188 446 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 CCDC63Q8NA47 563 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 HAUS1Q96CS2 278 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 NGRNQ9NPE2 291 aaKnown RBP6.78□□□□□ -1.32
SNX13-213ENST00000611725 SUPT20HL2P0C7V6 817 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 KRT3P12035 628 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 PSMA2P25787 234 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 DSG3P32926 999 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 PHBP35232 272 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 BASP1P80723 227 aaKnown RBP6.78□□□□□ -1.32
SNX13-213ENST00000611725 CUL2Q13617 745 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 TMED2Q15363 201 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 TTMPQ5BVD1 217 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 ANKRD20A3Q5VUR7 823 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 FYB2Q5VWT5 728 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 OR6B2Q6IFH4 312 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 ACAD10Q6JQN1 1059 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 FAM47EQ6ZV65 393 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 CCDC60Q8IWA6 550 aaPredicted RBP6.78□□□□□ -1.32
SNX13-213ENST00000611725 TTC13Q8NBP0 860 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 PGM2Q96G03 612 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 TRAIPQ9BWF2 469 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 C2orf40Q9H1Z8 148 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 RPF1Q9H9Y2 349 aaKnown RBP6.78□□□□□ -1.32
SNX13-213ENST00000611725 TMBIM4Q9HC24 238 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 COL20A1Q9P218 1284 aa6.78□□□□□ -1.32
SNX13-213ENST00000611725 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.78□□□□□ -1.32
SNX13-213ENST00000611725 RASA4BC9J798 803 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 MAPK13O15264 365 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 RASA4O43374 803 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 NEBLO76041 1014 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms