RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 BATF3Q9NR55 127 aa16.12■□□□□ 0.17
PCDHGB1-202ENST00000611598 TOPORSQ9NS56 1045 aaPredicted RBP16.12■□□□□ 0.17
PCDHGB1-202ENST00000611598 LGALS13Q9UHV8 139 aa16.12■□□□□ 0.17
PCDHGB1-202ENST00000611598 SPAG7O75391 227 aa16.12■□□□□ 0.17
PCDHGB1-202ENST00000611598 MAPK4P31152 587 aa16.12■□□□□ 0.17
PCDHGB1-202ENST00000611598 CCNHP51946 323 aaPredicted RBP16.12■□□□□ 0.17
PCDHGB1-202ENST00000611598 ATP11AP98196 1134 aa16.12■□□□□ 0.17
PCDHGB1-202ENST00000611598 TMED2Q15363 201 aa16.12■□□□□ 0.17
PCDHGB1-202ENST00000611598 B3GNT9Q6UX72 402 aa16.12■□□□□ 0.17
PCDHGB1-202ENST00000611598 HELQQ8TDG4 1101 aa16.12■□□□□ 0.17
PCDHGB1-202ENST00000611598 SAAL1Q96ER3 474 aa16.12■□□□□ 0.17
PCDHGB1-202ENST00000611598 ZDHHC15Q96MV8 337 aa16.12■□□□□ 0.17
PCDHGB1-202ENST00000611598 ACCSQ96QU6 501 aa16.12■□□□□ 0.17
PCDHGB1-202ENST00000611598 PLCD4Q9BRC7 762 aa16.12■□□□□ 0.17
PCDHGB1-202ENST00000611598 TRAIPQ9BWF2 469 aa16.12■□□□□ 0.17
PCDHGB1-202ENST00000611598 LARSQ9P2J5 1176 aaKnown RBP16.12■□□□□ 0.17
PCDHGB1-202ENST00000611598 EP400Q96L91 3159 aa16.12■□□□□ 0.17
PCDHGB1-202ENST00000611598 IPO5O00410 1097 aaKnown RBP16.11■□□□□ 0.17
PCDHGB1-202ENST00000611598 CDH16O75309 829 aa16.11■□□□□ 0.17
PCDHGB1-202ENST00000611598 TCEA3O75764 348 aa16.11■□□□□ 0.17
PCDHGB1-202ENST00000611598 MFAP3P55082 362 aa16.11■□□□□ 0.17
PCDHGB1-202ENST00000611598 MKRN3Q13064 507 aaKnown RBP16.11■□□□□ 0.17
PCDHGB1-202ENST00000611598 DNAJC3Q13217 504 aa16.11■□□□□ 0.17
PCDHGB1-202ENST00000611598 CYP4F22Q6NT55 531 aa16.11■□□□□ 0.17
PCDHGB1-202ENST00000611598 CNKSR1Q969H4 720 aa16.11■□□□□ 0.17
PCDHGB1-202ENST00000611598 ERP27Q96DN0 273 aa16.11■□□□□ 0.17
PCDHGB1-202ENST00000611598 TEKT3Q9BXF9 490 aa16.11■□□□□ 0.17
PCDHGB1-202ENST00000611598 WDR11Q9BZH6 1224 aa16.11■□□□□ 0.17
PCDHGB1-202ENST00000611598 TMEM206Q9H813 350 aa16.11■□□□□ 0.17
PCDHGB1-202ENST00000611598 DBNDD1Q9H9R9 158 aa16.11■□□□□ 0.17
PCDHGB1-202ENST00000611598 GPRC5CQ9NQ84 441 aa16.11■□□□□ 0.17
PCDHGB1-202ENST00000611598 RASA4BC9J798 803 aa16.11■□□□□ 0.17
PCDHGB1-202ENST00000611598 RASA4O43374 803 aa16.11■□□□□ 0.17
PCDHGB1-202ENST00000611598 GAS8O95995 478 aa16.11■□□□□ 0.17
PCDHGB1-202ENST00000611598 POLR2MP0CAP2 368 aa16.11■□□□□ 0.17
PCDHGB1-202ENST00000611598 ABL2P42684 1182 aa16.11■□□□□ 0.17
PCDHGB1-202ENST00000611598 STRN3Q13033 797 aa16.11■□□□□ 0.17
PCDHGB1-202ENST00000611598 NAIF1Q69YI7 327 aaPredicted RBP16.11■□□□□ 0.17
PCDHGB1-202ENST00000611598 ACAD10Q6JQN1 1059 aa16.11■□□□□ 0.17
PCDHGB1-202ENST00000611598 FAM167BQ9BTA0 163 aa16.11■□□□□ 0.17
PCDHGB1-202ENST00000611598 SLCO1B3Q9NPD5 702 aa16.11■□□□□ 0.17
PCDHGB1-202ENST00000611598 EURLQ9NYK6 297 aa16.11■□□□□ 0.17
PCDHGB1-202ENST00000611598 MROH7Q68CQ1 1323 aa16.1■□□□□ 0.17
PCDHGB1-202ENST00000611598 SORBS3O60504 671 aa16.1■□□□□ 0.17
PCDHGB1-202ENST00000611598 TARSP26639 723 aaKnown RBP16.1■□□□□ 0.17
PCDHGB1-202ENST00000611598 STAT2P52630 851 aa16.1■□□□□ 0.17
PCDHGB1-202ENST00000611598 MICAL1Q8TDZ2 1067 aa16.1■□□□□ 0.17
PCDHGB1-202ENST00000611598 TAS1R2Q8TE23 839 aa16.1■□□□□ 0.17
PCDHGB1-202ENST00000611598 PLVAPQ9BX97 442 aa16.1■□□□□ 0.17
PCDHGB1-202ENST00000611598 KIF9Q9HAQ2 790 aa16.1■□□□□ 0.17
PCDHGB1-202ENST00000611598 ZBTB21Q9ULJ3 1066 aa16.1■□□□□ 0.17
PCDHGB1-202ENST00000611598 NEU2Q9Y3R4 380 aa16.1■□□□□ 0.17
PCDHGB1-202ENST00000611598 LRRC37AA6NMS7 1700 aa16.1■□□□□ 0.17
PCDHGB1-202ENST00000611598 G3V3G9 751 aa16.1■□□□□ 0.17
PCDHGB1-202ENST00000611598 SLC16A4O15374 487 aa16.1■□□□□ 0.17
PCDHGB1-202ENST00000611598 SMNDC1O75940 238 aaKnown RBP eCLIP16.1■□□□□ 0.17
PCDHGB1-202ENST00000611598 MYCNP04198 464 aaPredicted RBP16.1■□□□□ 0.17
PCDHGB1-202ENST00000611598 RALAP11233 206 aa16.1■□□□□ 0.17
PCDHGB1-202ENST00000611598 MUTP22033 750 aa16.1■□□□□ 0.17
PCDHGB1-202ENST00000611598 ACVR2BQ13705 512 aa16.1■□□□□ 0.17
PCDHGB1-202ENST00000611598 DCAF8Q5TAQ9 597 aa16.1■□□□□ 0.17
PCDHGB1-202ENST00000611598 HAUS6Q7Z4H7 955 aa16.1■□□□□ 0.17
PCDHGB1-202ENST00000611598 C12orf56Q8IXR9 622 aa16.1■□□□□ 0.17
PCDHGB1-202ENST00000611598 FBF1Q8TES7 1133 aa16.1■□□□□ 0.17
PCDHGB1-202ENST00000611598 DDX27Q96GQ7 796 aaKnown RBP16.1■□□□□ 0.17
PCDHGB1-202ENST00000611598 NGLY1Q96IV0 654 aa16.1■□□□□ 0.17
PCDHGB1-202ENST00000611598 ZMYND8Q9ULU4 1186 aaPredicted RBP16.1■□□□□ 0.17
PCDHGB1-202ENST00000611598 CHKBQ9Y259 395 aa16.1■□□□□ 0.17
PCDHGB1-202ENST00000611598 VIL1P09327 827 aaKnown RBP16.09■□□□□ 0.17
PCDHGB1-202ENST00000611598 ADSSP30520 456 aa16.09■□□□□ 0.17
PCDHGB1-202ENST00000611598 SKIV2L2P42285 1042 aaKnown RBP16.09■□□□□ 0.17
PCDHGB1-202ENST00000611598 CLEC16AQ2KHT3 1053 aa16.09■□□□□ 0.17
PCDHGB1-202ENST00000611598 IZUMO3Q5VZ72 239 aa16.09■□□□□ 0.17
PCDHGB1-202ENST00000611598 ANKS1BQ7Z6G8 1248 aa16.09■□□□□ 0.17
PCDHGB1-202ENST00000611598 ATL2Q8NHH9 583 aa16.09■□□□□ 0.17
PCDHGB1-202ENST00000611598 HAO1Q9UJM8 370 aa16.09■□□□□ 0.17
PCDHGB1-202ENST00000611598 GRID1Q9ULK0 1009 aa16.09■□□□□ 0.17
PCDHGB1-202ENST00000611598 ATRNL1Q5VV63 1379 aa16.09■□□□□ 0.17
PCDHGB1-202ENST00000611598 GSTTP1A0A1W2PQM5 241 aa16.09■□□□□ 0.17
PCDHGB1-202ENST00000611598 FAM47DPA6NHR8 397 aa16.09■□□□□ 0.17
PCDHGB1-202ENST00000611598 UPP2O95045 317 aa16.09■□□□□ 0.17
PCDHGB1-202ENST00000611598 KRT5P13647 590 aa16.09■□□□□ 0.17
PCDHGB1-202ENST00000611598 PLS3P13797 630 aa16.09■□□□□ 0.17
PCDHGB1-202ENST00000611598 GM2AP17900 193 aa16.09■□□□□ 0.17
PCDHGB1-202ENST00000611598 SNRNP35Q16560 246 aaKnown RBP16.09■□□□□ 0.17
PCDHGB1-202ENST00000611598 GRIPAP1Q4V328 841 aa16.09■□□□□ 0.17
PCDHGB1-202ENST00000611598 HP1BP3Q5SSJ5 553 aaPredicted RBP16.09■□□□□ 0.17
PCDHGB1-202ENST00000611598 MEX3CQ5U5Q3 659 aaKnown RBP16.09■□□□□ 0.17
PCDHGB1-202ENST00000611598 VSIG1Q86XK7 387 aa16.09■□□□□ 0.17
PCDHGB1-202ENST00000611598 ACER1Q8TDN7 264 aa16.09■□□□□ 0.17
PCDHGB1-202ENST00000611598 GRK7Q8WTQ7 553 aa16.09■□□□□ 0.17
PCDHGB1-202ENST00000611598 CPA5Q8WXQ8 436 aa16.09■□□□□ 0.17
PCDHGB1-202ENST00000611598 MAML1Q92585 1016 aa16.09■□□□□ 0.17
PCDHGB1-202ENST00000611598 PI4K2AQ9BTU6 479 aa16.09■□□□□ 0.17
PCDHGB1-202ENST00000611598 ADAM33Q9BZ11 813 aa16.09■□□□□ 0.17
PCDHGB1-202ENST00000611598 ZHX2Q9Y6X8 837 aa16.09■□□□□ 0.17
PCDHGB1-202ENST00000611598 ITGB5P18084 799 aa16.08■□□□□ 0.17
PCDHGB1-202ENST00000611598 GCAP28676 217 aa16.08■□□□□ 0.17
PCDHGB1-202ENST00000611598 RARRES1P49788 294 aa16.08■□□□□ 0.17
PCDHGB1-202ENST00000611598 POLGP54098 1239 aaPredicted RBP16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms