RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 LARP1BQ659C4 914 aaKnown RBP7.84□□□□□ -1.15
CBWD1-219ENST00000611457 TOP6BLQ8N6T0 577 aa7.84□□□□□ -1.15
CBWD1-219ENST00000611457 SNX29Q8TEQ0 813 aa7.84□□□□□ -1.15
CBWD1-219ENST00000611457 PIBF1Q8WXW3 757 aa7.84□□□□□ -1.15
CBWD1-219ENST00000611457 C17orf80Q9BSJ5 609 aa7.84□□□□□ -1.15
CBWD1-219ENST00000611457 PHF7Q9BWX1 381 aaPredicted RBP7.84□□□□□ -1.15
CBWD1-219ENST00000611457 EMILIN2Q9BXX0 1053 aa7.84□□□□□ -1.15
CBWD1-219ENST00000611457 PARVGQ9HBI0 331 aa7.84□□□□□ -1.15
CBWD1-219ENST00000611457 PNPLA8Q9NP80 782 aa7.84□□□□□ -1.15
CBWD1-219ENST00000611457 RGL1Q9NZL6 768 aa7.84□□□□□ -1.15
CBWD1-219ENST00000611457 SF3B1O75533 1304 aaKnown RBP eCLIP7.84□□□□□ -1.15
CBWD1-219ENST00000611457 TICRRQ7Z2Z1 1910 aa7.84□□□□□ -1.16
CBWD1-219ENST00000611457 DENND3A2RUS2 1198 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 POTEMA6NI47 508 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 PPP3CCP48454 512 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 SLC11A1P49279 550 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 AMPD3Q01432 767 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 NOLC1Q14978 699 aaKnown RBP eCLIP7.83□□□□□ -1.16
CBWD1-219ENST00000611457 CRELD2Q6UXH1 353 aaPredicted RBP7.83□□□□□ -1.16
CBWD1-219ENST00000611457 STXBP4Q6ZWJ1 553 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 OTOP2Q7RTS6 562 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 KCNK18Q7Z418 384 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 UBR7Q8N806 425 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 MYRFLQ96LU7 910 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 SCAND2PQ9GZW5 306 aaPredicted RBP7.83□□□□□ -1.16
CBWD1-219ENST00000611457 TOPORSQ9NS56 1045 aaPredicted RBP7.83□□□□□ -1.16
CBWD1-219ENST00000611457 VTNP04004 478 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 VASPP50552 380 aaPredicted RBP7.83□□□□□ -1.16
CBWD1-219ENST00000611457 PRPF4BQ13523 1007 aaKnown RBP7.83□□□□□ -1.16
CBWD1-219ENST00000611457 PSMD6Q15008 389 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 BEND5Q7L4P6 421 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 TRIML1Q8N9V2 468 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 BCL7CQ8WUZ0 217 aaPredicted RBP7.83□□□□□ -1.16
CBWD1-219ENST00000611457 VTI1AQ96AJ9 217 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 YME1L1Q96TA2 773 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 TTLL2Q9BWV7 592 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 DDX19AQ9NUU7 478 aaKnown RBP7.83□□□□□ -1.16
CBWD1-219ENST00000611457 IGSF9Q9P2J2 1179 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 AKT3Q9Y243 479 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 TBX10O75333 385 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 ECI2O75521 394 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 WARSP23381 471 aaKnown RBP7.83□□□□□ -1.16
CBWD1-219ENST00000611457 TUBP50607 506 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 SMTNP53814 917 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 KRT17Q04695 432 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 BTG3Q14201 252 aaPredicted RBP7.83□□□□□ -1.16
CBWD1-219ENST00000611457 CTTNQ14247 550 aaKnown RBP7.83□□□□□ -1.16
CBWD1-219ENST00000611457 PLA2G4FQ68DD2 849 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 SYCE2Q6PIF2 218 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 KLHL23Q8NBE8 558 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 HAPLN2Q9GZV7 340 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 ZCWPW1Q9H0M4 648 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 KCTD10Q9H3F6 313 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 PRDM6Q9NQX0 595 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 UBQLN1Q9UMX0 589 aaKnown RBP7.83□□□□□ -1.16
CBWD1-219ENST00000611457 CNTN6Q9UQ52 1028 aa7.83□□□□□ -1.16
CBWD1-219ENST00000611457 GRM6O15303 877 aa7.82□□□□□ -1.16
CBWD1-219ENST00000611457 P4HA2O15460 535 aa7.82□□□□□ -1.16
CBWD1-219ENST00000611457 EXTL3O43909 919 aa7.82□□□□□ -1.16
CBWD1-219ENST00000611457 POTEGQ6S5H5 508 aa7.82□□□□□ -1.16
CBWD1-219ENST00000611457 ANKS3Q6ZW76 656 aa7.82□□□□□ -1.16
CBWD1-219ENST00000611457 WDR49Q8IV35 697 aa7.82□□□□□ -1.16
CBWD1-219ENST00000611457 LNX1Q8TBB1 728 aaPredicted RBP7.82□□□□□ -1.16
CBWD1-219ENST00000611457 GPT2Q8TD30 523 aa7.82□□□□□ -1.16
CBWD1-219ENST00000611457 NLRP7Q8WX94 980 aa7.82□□□□□ -1.16
CBWD1-219ENST00000611457 FUBP3Q96I24 572 aaKnown RBP eCLIP7.82□□□□□ -1.16
CBWD1-219ENST00000611457 ACCSQ96QU6 501 aa7.82□□□□□ -1.16
CBWD1-219ENST00000611457 TRIM9Q9C026 710 aa7.82□□□□□ -1.16
CBWD1-219ENST00000611457 GPR88Q9GZN0 384 aa7.82□□□□□ -1.16
CBWD1-219ENST00000611457 ADAM28Q9UKQ2 775 aa7.82□□□□□ -1.16
CBWD1-219ENST00000611457 LRFN2Q9ULH4 789 aa7.82□□□□□ -1.16
CBWD1-219ENST00000611457 COQ4Q9Y3A0 265 aa7.82□□□□□ -1.16
CBWD1-219ENST00000611457 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.82□□□□□ -1.16
CBWD1-219ENST00000611457 DOCK8Q8NF50 2099 aa7.82□□□□□ -1.16
CBWD1-219ENST00000611457 PDXKO00764 312 aa7.82□□□□□ -1.16
CBWD1-219ENST00000611457 IKBKBO14920 756 aa7.82□□□□□ -1.16
CBWD1-219ENST00000611457 ZMYND10O75800 440 aa7.82□□□□□ -1.16
CBWD1-219ENST00000611457 MCM7P33993 719 aa7.82□□□□□ -1.16
CBWD1-219ENST00000611457 TECP42680 631 aa7.82□□□□□ -1.16
CBWD1-219ENST00000611457 GLUD2P49448 558 aa7.82□□□□□ -1.16
CBWD1-219ENST00000611457 GABPB1Q06547 395 aaPredicted RBP7.82□□□□□ -1.16
CBWD1-219ENST00000611457 SF3A1Q15459 793 aaKnown RBP7.82□□□□□ -1.16
CBWD1-219ENST00000611457 KIZQ2M2Z5 673 aa7.82□□□□□ -1.16
CBWD1-219ENST00000611457 TCEAL5Q5H9L2 206 aa7.82□□□□□ -1.16
CBWD1-219ENST00000611457 SHC4Q6S5L8 630 aa7.82□□□□□ -1.16
CBWD1-219ENST00000611457 RAB11FIP4Q86YS3 637 aa7.82□□□□□ -1.16
CBWD1-219ENST00000611457 ZNF707Q96C28 371 aaPredicted RBP7.82□□□□□ -1.16
CBWD1-219ENST00000611457 REEP2Q9BRK0 252 aa7.82□□□□□ -1.16
CBWD1-219ENST00000611457 TSPY26PQ9H489 355 aa7.82□□□□□ -1.16
CBWD1-219ENST00000611457 TYW1Q9NV66 732 aaKnown RBP7.82□□□□□ -1.16
CBWD1-219ENST00000611457 OGFRQ9NZT2 677 aa7.82□□□□□ -1.16
CBWD1-219ENST00000611457 SYCE3A1L190 88 aa7.81□□□□□ -1.16
CBWD1-219ENST00000611457 SPDYE4A6NLX3 237 aa7.81□□□□□ -1.16
CBWD1-219ENST00000611457 DDHD2O94830 711 aa7.81□□□□□ -1.16
CBWD1-219ENST00000611457 OLFM2O95897 454 aa7.81□□□□□ -1.16
CBWD1-219ENST00000611457 PLCG1P19174 1290 aa7.81□□□□□ -1.16
CBWD1-219ENST00000611457 CTNNB1P35222 781 aa7.81□□□□□ -1.16
CBWD1-219ENST00000611457 HOXD13P35453 343 aa7.81□□□□□ -1.16
CBWD1-219ENST00000611457 TXKP42681 527 aa7.81□□□□□ -1.16
CBWD1-219ENST00000611457 RABGGTBP53611 331 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms