RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 KLHL11Q9NVR0 708 aa16.5■□□□□ 0.23
TNXB-208ENST00000611016 LSM7Q9UK45 103 aaKnown RBP16.5■□□□□ 0.23
TNXB-208ENST00000611016 L3MBTL1Q9Y468 752 aa16.5■□□□□ 0.23
TNXB-208ENST00000611016 PTPRUQ92729 1446 aa16.5■□□□□ 0.23
TNXB-208ENST00000611016 CCDC195A0A1B0GUA6 201 aa16.5■□□□□ 0.23
TNXB-208ENST00000611016 SGSM1Q2NKQ1 1148 aa16.5■□□□□ 0.23
TNXB-208ENST00000611016 ATF7IP2Q5U623 682 aa16.5■□□□□ 0.23
TNXB-208ENST00000611016 SLC30A5Q8TAD4 765 aa16.5■□□□□ 0.23
TNXB-208ENST00000611016 ATP9BO43861 1147 aa16.5■□□□□ 0.23
TNXB-208ENST00000611016 HNRNPCL1O60812 293 aaKnown RBP16.5■□□□□ 0.23
TNXB-208ENST00000611016 PNMA6AP0CW24 399 aaPredicted RBP16.5■□□□□ 0.23
TNXB-208ENST00000611016 KLRK1P26718 216 aa16.5■□□□□ 0.23
TNXB-208ENST00000611016 CCDC137Q6PK04 289 aaKnown RBP16.5■□□□□ 0.23
TNXB-208ENST00000611016 INTUQ9ULD6 942 aa16.5■□□□□ 0.23
TNXB-208ENST00000611016 E9PCH4 1651 aa16.5■□□□□ 0.23
TNXB-208ENST00000611016 CPT1AP50416 773 aa16.5■□□□□ 0.23
TNXB-208ENST00000611016 TAAR1Q96RJ0 339 aa16.5■□□□□ 0.23
TNXB-208ENST00000611016 MRGBPQ9NV56 204 aa16.5■□□□□ 0.23
TNXB-208ENST00000611016 CHUKO15111 745 aa16.49■□□□□ 0.23
TNXB-208ENST00000611016 PPARGC1AQ9UBK2 798 aaKnown RBP16.49■□□□□ 0.23
TNXB-208ENST00000611016 CD4P01730 458 aa16.49■□□□□ 0.23
TNXB-208ENST00000611016 OR1G1P47890 313 aa16.49■□□□□ 0.23
TNXB-208ENST00000611016 FCGRTP55899 365 aa16.49■□□□□ 0.23
TNXB-208ENST00000611016 LBRQ14739 615 aaKnown RBP16.49■□□□□ 0.23
TNXB-208ENST00000611016 GLB1LQ6UWU2 654 aa16.49■□□□□ 0.23
TNXB-208ENST00000611016 C7orf25Q9BPX7 421 aa16.49■□□□□ 0.23
TNXB-208ENST00000611016 XAB2Q9HCS7 855 aaKnown RBP16.49■□□□□ 0.23
TNXB-208ENST00000611016 APEX2Q9UBZ4 518 aa16.49■□□□□ 0.23
TNXB-208ENST00000611016 SNRPFP62306 86 aaKnown RBP16.49■□□□□ 0.23
TNXB-208ENST00000611016 ZC2HC1CQ53FD0 456 aaPredicted RBP16.49■□□□□ 0.23
TNXB-208ENST00000611016 HDAC6Q9UBN7 1215 aa16.49■□□□□ 0.23
TNXB-208ENST00000611016 BCORL1Q5H9F3 1711 aa16.49■□□□□ 0.23
TNXB-208ENST00000611016 CXorf38Q8TB03 319 aa16.49■□□□□ 0.23
TNXB-208ENST00000611016 MCF2P10911 925 aa16.49■□□□□ 0.23
TNXB-208ENST00000611016 IRF1P10914 325 aa16.49■□□□□ 0.23
TNXB-208ENST00000611016 LAMB3Q13751 1172 aa16.49■□□□□ 0.23
TNXB-208ENST00000611016 THEMIS2Q5TEJ8 643 aa16.49■□□□□ 0.23
TNXB-208ENST00000611016 CLEC17AQ6ZS10 378 aa16.49■□□□□ 0.23
TNXB-208ENST00000611016 TRMT10CQ7L0Y3 403 aaKnown RBP16.49■□□□□ 0.23
TNXB-208ENST00000611016 GSPT2Q8IYD1 628 aaKnown RBP16.49■□□□□ 0.23
TNXB-208ENST00000611016 ELAC2Q9BQ52 826 aaKnown RBP16.49■□□□□ 0.23
TNXB-208ENST00000611016 SLC38A7Q9NVC3 462 aa16.49■□□□□ 0.23
TNXB-208ENST00000611016 HBP1O60381 514 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 GTF2A2P52657 109 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 EIF3EP60228 445 aaKnown RBP16.48■□□□□ 0.23
TNXB-208ENST00000611016 CAPRIN1Q14444 709 aaKnown RBP16.48■□□□□ 0.23
TNXB-208ENST00000611016 HIBCHQ6NVY1 386 aaPredicted RBP16.48■□□□□ 0.23
TNXB-208ENST00000611016 SENP2Q9HC62 589 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 KCNH7Q9NS40 1196 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 TEKT2Q9UIF3 430 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 CAPN11Q9UMQ6 739 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 MYMKA6NI61 221 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 NOP14P78316 857 aaKnown RBP16.48■□□□□ 0.23
TNXB-208ENST00000611016 KCNA1Q09470 495 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 INTS5Q6P9B9 1019 aaKnown RBP16.48■□□□□ 0.23
TNXB-208ENST00000611016 LCA5Q86VQ0 697 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 COL23A1Q86Y22 540 aaPredicted RBP16.48■□□□□ 0.23
TNXB-208ENST00000611016 ZNF512Q96ME7 567 aaPredicted RBP16.48■□□□□ 0.23
TNXB-208ENST00000611016 POLR3CQ9BUI4 534 aaPredicted RBP16.48■□□□□ 0.23
TNXB-208ENST00000611016 STOML1Q9UBI4 398 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 TFRCP02786 760 aaKnown RBP16.48■□□□□ 0.23
TNXB-208ENST00000611016 EEF1DP29692 281 aaKnown RBP16.48■□□□□ 0.23
TNXB-208ENST00000611016 ST8SIA6P61647 398 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 WDR35Q9P2L0 1181 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 GYG2O15488 501 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 MAFGO15525 162 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 TRPA1O75762 1119 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 PDGFRAP16234 1089 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 EEF1B2P24534 225 aaKnown RBP16.48■□□□□ 0.23
TNXB-208ENST00000611016 FMO5P49326 533 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 PPP2R2AP63151 447 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 TBCCQ15814 346 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 MGAT5BQ3V5L5 792 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 FAM47EQ6ZV65 393 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 TAF1DQ9H5J8 278 aaPredicted RBP16.48■□□□□ 0.23
TNXB-208ENST00000611016 ZFP69BQ9UJL9 534 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 ESYT3A0FGR9 886 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 TADA3O75528 432 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 LAMC2Q13753 1193 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 MED15Q96RN5 788 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 TRIM54Q9BYV2 358 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 PCDHB7Q9Y5E2 793 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 ADGRG1Q9Y653 693 aa16.48■□□□□ 0.23
TNXB-208ENST00000611016 ARSEP51690 589 aa16.47■□□□□ 0.23
TNXB-208ENST00000611016 TRADDQ15628 312 aa16.47■□□□□ 0.23
TNXB-208ENST00000611016 IZUMO3Q5VZ72 239 aa16.47■□□□□ 0.23
TNXB-208ENST00000611016 CEP19Q96LK0 163 aa16.47■□□□□ 0.23
TNXB-208ENST00000611016 SLC13A1Q9BZW2 595 aa16.47■□□□□ 0.23
TNXB-208ENST00000611016 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.47■□□□□ 0.23
TNXB-208ENST00000611016 ABCA9Q8IUA7 1624 aa16.47■□□□□ 0.23
TNXB-208ENST00000611016 HAUS5O94927 633 aa16.47■□□□□ 0.23
TNXB-208ENST00000611016 IL18RAPO95256 599 aa16.47■□□□□ 0.23
TNXB-208ENST00000611016 TCF7P36402 384 aaPredicted RBP16.47■□□□□ 0.23
TNXB-208ENST00000611016 ANTXR2P58335 489 aa16.47■□□□□ 0.23
TNXB-208ENST00000611016 RPS6P62753 249 aaKnown RBP16.47■□□□□ 0.23
TNXB-208ENST00000611016 RNF180Q86T96 592 aa16.47■□□□□ 0.23
TNXB-208ENST00000611016 RBBP8NLQ8NC74 664 aaPredicted RBP16.47■□□□□ 0.23
TNXB-208ENST00000611016 RIT2Q99578 217 aa16.47■□□□□ 0.23
TNXB-208ENST00000611016 STK33Q9BYT3 514 aa16.47■□□□□ 0.23
TNXB-208ENST00000611016 CCDC22O60826 627 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms