RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 PCYOX1Q9UHG3 505 aa25.5■■□□□ 1.67
HOXA4-204ENST00000610970 LRRC37A2A6NM11 1700 aa25.5■■□□□ 1.67
HOXA4-204ENST00000610970 TMEM110-MUSTN1A8MSY1 372 aa25.49■■□□□ 1.67
HOXA4-204ENST00000610970 PODXLO00592 558 aa25.49■■□□□ 1.67
HOXA4-204ENST00000610970 DAPK3O43293 454 aa25.49■■□□□ 1.67
HOXA4-204ENST00000610970 SPOPO43791 374 aa25.49■■□□□ 1.67
HOXA4-204ENST00000610970 TTMPQ5BVD1 217 aa25.49■■□□□ 1.67
HOXA4-204ENST00000610970 DUPD1Q68J44 220 aa25.49■■□□□ 1.67
HOXA4-204ENST00000610970 PI4K2AQ9BTU6 479 aa25.49■■□□□ 1.67
HOXA4-204ENST00000610970 HMGB1P1B2RPK0 211 aaPredicted RBP25.49■■□□□ 1.67
HOXA4-204ENST00000610970 POTEJP0CG39 1038 aa25.49■■□□□ 1.67
HOXA4-204ENST00000610970 SLC1A1P43005 524 aa25.49■■□□□ 1.67
HOXA4-204ENST00000610970 ACOT2P49753 483 aa25.49■■□□□ 1.67
HOXA4-204ENST00000610970 RWDD2BP57060 319 aa25.49■■□□□ 1.67
HOXA4-204ENST00000610970 ZNF211Q13398 564 aaPredicted RBP25.49■■□□□ 1.67
HOXA4-204ENST00000610970 BIRC3Q13489 604 aa25.49■■□□□ 1.67
HOXA4-204ENST00000610970 CYP1B1Q16678 543 aa25.49■■□□□ 1.67
HOXA4-204ENST00000610970 ANKRD13AQ8IZ07 590 aa25.49■■□□□ 1.67
HOXA4-204ENST00000610970 MCOLN2Q8IZK6 566 aa25.49■■□□□ 1.67
HOXA4-204ENST00000610970 KRT35Q92764 455 aa25.49■■□□□ 1.67
HOXA4-204ENST00000610970 ARL8AQ96BM9 186 aa25.49■■□□□ 1.67
HOXA4-204ENST00000610970 JPH2Q9BR39 696 aaPredicted RBP25.49■■□□□ 1.67
HOXA4-204ENST00000610970 TARS2Q9BW92 718 aaKnown RBP25.49■■□□□ 1.67
HOXA4-204ENST00000610970 ACP6Q9NPH0 428 aa25.49■■□□□ 1.67
HOXA4-204ENST00000610970 RNF181Q9P0P0 153 aa25.49■■□□□ 1.67
HOXA4-204ENST00000610970 CNTN6Q9UQ52 1028 aa25.49■■□□□ 1.67
HOXA4-204ENST00000610970 PLAAQ9Y263 795 aa25.49■■□□□ 1.67
HOXA4-204ENST00000610970 GOLGA6L10A6NI86 522 aa25.48■■□□□ 1.67
HOXA4-204ENST00000610970 LGR5O75473 907 aa25.48■■□□□ 1.67
HOXA4-204ENST00000610970 TCF7P36402 384 aaPredicted RBP25.48■■□□□ 1.67
HOXA4-204ENST00000610970 HSD17B3P37058 310 aa25.48■■□□□ 1.67
HOXA4-204ENST00000610970 CUL2Q13617 745 aa25.48■■□□□ 1.67
HOXA4-204ENST00000610970 CAPSQ13938 189 aa25.48■■□□□ 1.67
HOXA4-204ENST00000610970 MXD4Q14582 209 aaPredicted RBP25.48■■□□□ 1.67
HOXA4-204ENST00000610970 SURF1Q15526 300 aa25.48■■□□□ 1.67
HOXA4-204ENST00000610970 PLPPR4Q7Z2D5 763 aa25.48■■□□□ 1.67
HOXA4-204ENST00000610970 VCPIP1Q96JH7 1222 aa25.48■■□□□ 1.67
HOXA4-204ENST00000610970 FAM129AQ9BZQ8 928 aa25.48■■□□□ 1.67
HOXA4-204ENST00000610970 HAPLN2Q9GZV7 340 aa25.48■■□□□ 1.67
HOXA4-204ENST00000610970 ASCC2Q9H1I8 757 aaPredicted RBP25.48■■□□□ 1.67
HOXA4-204ENST00000610970 AGTPBP1Q9UPW5 1226 aa25.48■■□□□ 1.67
HOXA4-204ENST00000610970 KCNH4Q9UQ05 1017 aa25.48■■□□□ 1.67
HOXA4-204ENST00000610970 NR2E1Q9Y466 385 aa25.48■■□□□ 1.67
HOXA4-204ENST00000610970 ZNFX1Q9P2E3 1918 aaKnown RBP25.48■■□□□ 1.67
HOXA4-204ENST00000610970 CNMDO75829 334 aa25.47■■□□□ 1.67
HOXA4-204ENST00000610970 VNN1O95497 513 aa25.47■■□□□ 1.67
HOXA4-204ENST00000610970 CYP1A1P04798 512 aaPredicted RBP25.47■■□□□ 1.67
HOXA4-204ENST00000610970 NF2P35240 595 aa25.47■■□□□ 1.67
HOXA4-204ENST00000610970 CENPCQ03188 943 aa25.47■■□□□ 1.67
HOXA4-204ENST00000610970 DDX42Q86XP3 938 aaKnown RBP eCLIP25.47■■□□□ 1.67
HOXA4-204ENST00000610970 MAIP1Q8WWC4 291 aa25.47■■□□□ 1.67
HOXA4-204ENST00000610970 CAPS2Q9BXY5 557 aa25.47■■□□□ 1.67
HOXA4-204ENST00000610970 MRPL4Q9BYD3 311 aaKnown RBP25.47■■□□□ 1.67
HOXA4-204ENST00000610970 PARP2Q9UGN5 583 aa25.47■■□□□ 1.67
HOXA4-204ENST00000610970 SPDYE5A6NIY4 337 aa25.46■■□□□ 1.67
HOXA4-204ENST00000610970 DDNO94850 711 aaPredicted RBP25.46■■□□□ 1.67
HOXA4-204ENST00000610970 ACO1P21399 889 aaKnown RBP25.46■■□□□ 1.67
HOXA4-204ENST00000610970 C9orf131Q5VYM1 1079 aa25.46■■□□□ 1.67
HOXA4-204ENST00000610970 RUFY4Q6ZNE9 571 aa25.46■■□□□ 1.67
HOXA4-204ENST00000610970 CELF4Q9BZC1 486 aaKnown RBP25.46■■□□□ 1.67
HOXA4-204ENST00000610970 C2orf40Q9H1Z8 148 aa25.46■■□□□ 1.67
HOXA4-204ENST00000610970 CNTNAP2Q9UHC6 1331 aa25.46■■□□□ 1.67
HOXA4-204ENST00000610970 ATMINO43313 823 aaPredicted RBP25.46■■□□□ 1.67
HOXA4-204ENST00000610970 PPIL2Q13356 520 aa25.46■■□□□ 1.67
HOXA4-204ENST00000610970 NAA35Q5VZE5 725 aa25.46■■□□□ 1.67
HOXA4-204ENST00000610970 CDCA2Q69YH5 1023 aaPredicted RBP25.46■■□□□ 1.67
HOXA4-204ENST00000610970 LRRC31Q6UY01 552 aa25.46■■□□□ 1.67
HOXA4-204ENST00000610970 SLC13A5Q86YT5 568 aaPredicted RBP25.46■■□□□ 1.67
HOXA4-204ENST00000610970 JAMLQ86YT9 394 aa25.46■■□□□ 1.67
HOXA4-204ENST00000610970 BRSK2Q8IWQ3 736 aa25.46■■□□□ 1.67
HOXA4-204ENST00000610970 C12orf50Q8NA57 414 aaPredicted RBP25.46■■□□□ 1.67
HOXA4-204ENST00000610970 CNKSR2Q8WXI2 1034 aa25.46■■□□□ 1.67
HOXA4-204ENST00000610970 ZBTB45Q96K62 511 aaPredicted RBP25.46■■□□□ 1.67
HOXA4-204ENST00000610970 ATP6V1G3Q96LB4 118 aa25.46■■□□□ 1.67
HOXA4-204ENST00000610970 NEUROG2Q9H2A3 272 aa25.46■■□□□ 1.67
HOXA4-204ENST00000610970 ELP3Q9H9T3 547 aa25.46■■□□□ 1.67
HOXA4-204ENST00000610970 ERVK-5Q9HDB9 667 aa25.46■■□□□ 1.67
HOXA4-204ENST00000610970 ADM5C9JUS6 153 aa25.45■■□□□ 1.66
HOXA4-204ENST00000610970 CLDN3O15551 220 aa25.45■■□□□ 1.66
HOXA4-204ENST00000610970 TOM1L1O75674 476 aa25.45■■□□□ 1.66
HOXA4-204ENST00000610970 KRT14P02533 472 aa25.45■■□□□ 1.66
HOXA4-204ENST00000610970 CLTAP09496 248 aa25.45■■□□□ 1.66
HOXA4-204ENST00000610970 MAPK4P31152 587 aa25.45■■□□□ 1.66
HOXA4-204ENST00000610970 NSFP46459 744 aaKnown RBP25.45■■□□□ 1.66
HOXA4-204ENST00000610970 SLC26A2P50443 739 aa25.45■■□□□ 1.66
HOXA4-204ENST00000610970 LIN9Q5TKA1 542 aa25.45■■□□□ 1.66
HOXA4-204ENST00000610970 KDM7AQ6ZMT4 941 aa25.45■■□□□ 1.66
HOXA4-204ENST00000610970 TMC3Q7Z5M5 1100 aa25.45■■□□□ 1.66
HOXA4-204ENST00000610970 ZBTB8OSQ8IWT0 167 aa25.45■■□□□ 1.66
HOXA4-204ENST00000610970 PRELID2Q8N945 189 aa25.45■■□□□ 1.66
HOXA4-204ENST00000610970 MAGOHBQ96A72 148 aaKnown RBP25.45■■□□□ 1.66
HOXA4-204ENST00000610970 TMBIM4Q9HC24 238 aa25.45■■□□□ 1.66
HOXA4-204ENST00000610970 ANKFY1Q9P2R3 1169 aa25.45■■□□□ 1.66
HOXA4-204ENST00000610970 H0YGN5 161 aa25.44■■□□□ 1.66
HOXA4-204ENST00000610970 PPFIA2O75334 1257 aa25.44■■□□□ 1.66
HOXA4-204ENST00000610970 PYGMP11217 842 aa25.44■■□□□ 1.66
HOXA4-204ENST00000610970 OSBPP22059 807 aa25.44■■□□□ 1.66
HOXA4-204ENST00000610970 PTGIRP43119 386 aa25.44■■□□□ 1.66
HOXA4-204ENST00000610970 FNTAP49354 379 aa25.44■■□□□ 1.66
HOXA4-204ENST00000610970 CELF3Q5SZQ8 465 aaKnown RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms