RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 TARBP2Q15633 366 aaKnown RBP11.17□□□□□ -0.62
PABPC1-224ENST00000610907 KCTD16Q68DU8 428 aa11.17□□□□□ -0.62
PABPC1-224ENST00000610907 KCNV1Q6PIU1 500 aa11.17□□□□□ -0.62
PABPC1-224ENST00000610907 CCDC137Q6PK04 289 aaKnown RBP11.17□□□□□ -0.62
PABPC1-224ENST00000610907 ZPBP2Q6X784 338 aa11.17□□□□□ -0.62
PABPC1-224ENST00000610907 SYDE1Q6ZW31 735 aaPredicted RBP11.17□□□□□ -0.62
PABPC1-224ENST00000610907 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.17□□□□□ -0.62
PABPC1-224ENST00000610907 C3orf20Q8ND61 904 aa11.17□□□□□ -0.62
PABPC1-224ENST00000610907 FAM167AQ96KS9 214 aa11.17□□□□□ -0.62
PABPC1-224ENST00000610907 MPHOSPH6Q99547 160 aaKnown RBP11.17□□□□□ -0.62
PABPC1-224ENST00000610907 CGRRF1Q99675 332 aa11.17□□□□□ -0.62
PABPC1-224ENST00000610907 TRIM51Q9BSJ1 452 aa11.17□□□□□ -0.62
PABPC1-224ENST00000610907 HOMER3Q9NSC5 361 aa11.17□□□□□ -0.62
PABPC1-224ENST00000610907 GGA3Q9NZ52 723 aa11.17□□□□□ -0.62
PABPC1-224ENST00000610907 FEZ2Q9UHY8 353 aaPredicted RBP11.17□□□□□ -0.62
PABPC1-224ENST00000610907 LCMT1Q9UIC8 334 aa11.17□□□□□ -0.62
PABPC1-224ENST00000610907 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.17□□□□□ -0.62
PABPC1-224ENST00000610907 ZNF541Q9H0D2 1346 aa11.17□□□□□ -0.62
PABPC1-224ENST00000610907 MYO1FO00160 1098 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 ADCY3O60266 1144 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 MAPK4P31152 587 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 FLT3P36888 993 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 PIK3CAP42336 1068 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 CDR1P51861 262 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 SP4Q02446 784 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 SLMAPQ14BN4 828 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 LIN9Q5TKA1 542 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 PRAMEF18Q5VWM3 479 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 CRELD2Q6UXH1 353 aaPredicted RBP11.16□□□□□ -0.62
PABPC1-224ENST00000610907 B4GALNT4Q76KP1 1039 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 HOOK3Q86VS8 718 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 SH2D3CQ8N5H7 860 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 TRPM4Q8TD43 1214 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 ASAP3Q8TDY4 903 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 GLG1Q92896 1179 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 EPN3Q9H201 632 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 PABPC3Q9H361 631 aaKnown RBP11.16□□□□□ -0.62
PABPC1-224ENST00000610907 MRPL47Q9HD33 250 aaKnown RBP11.16□□□□□ -0.62
PABPC1-224ENST00000610907 ACP6Q9NPH0 428 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 RBAKQ9NYW8 714 aaPredicted RBP11.16□□□□□ -0.62
PABPC1-224ENST00000610907 PPP1R1BQ9UD71 204 aaPredicted RBP11.16□□□□□ -0.62
PABPC1-224ENST00000610907 ADGRA2Q96PE1 1338 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 PASKQ96RG2 1323 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 SIP14410 1827 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 GSTTP1A0A1W2PQM5 241 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 LRRIQ4A6NIV6 560 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 MYO1CO00159 1063 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 MAFO75444 373 aaPredicted RBP11.16□□□□□ -0.62
PABPC1-224ENST00000610907 ACO1P21399 889 aaKnown RBP11.16□□□□□ -0.62
PABPC1-224ENST00000610907 LSP1P33241 339 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 COPB2P35606 906 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 NSFP46459 744 aaKnown RBP11.16□□□□□ -0.62
PABPC1-224ENST00000610907 MARCKSL1P49006 195 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 STAT5BP51692 787 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 PMS2P54278 862 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 NLRP11P59045 1033 aaKnown RBP11.16□□□□□ -0.62
PABPC1-224ENST00000610907 CUL2Q13617 745 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 R3HDM1Q15032 1099 aaKnown RBP11.16□□□□□ -0.62
PABPC1-224ENST00000610907 SIX1Q15475 284 aaPredicted RBP11.16□□□□□ -0.62
PABPC1-224ENST00000610907 SURF1Q15526 300 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 TDRD10Q5VZ19 366 aaKnown RBP11.16□□□□□ -0.62
PABPC1-224ENST00000610907 FOXR1Q6PIV2 292 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 ZDHHC24Q6UX98 284 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 CCDC105Q8IYK2 499 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 PROCA1Q8NCQ7 364 aaPredicted RBP11.16□□□□□ -0.62
PABPC1-224ENST00000610907 TCP11Q8WWU5 503 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 SEPT1Q8WYJ6 367 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 TMEM143Q96AN5 459 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 C18orf8Q96DM3 657 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 PAGR1Q9BTK6 254 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 PI4K2AQ9BTU6 479 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 MSTO1Q9BUK6 570 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 TMEM109Q9BVC6 243 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 CNOT10Q9H9A5 744 aaKnown RBP11.16□□□□□ -0.62
PABPC1-224ENST00000610907 GRHL1Q9NZI5 618 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 ANAPC7Q9UJX3 599 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 GGA2Q9UJY4 613 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 TELO2Q9Y4R8 837 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 SNCAIPQ9Y6H5 919 aa11.16□□□□□ -0.62
PABPC1-224ENST00000610907 SSC5DA1L4H1 1573 aa11.15□□□□□ -0.62
PABPC1-224ENST00000610907 ATMINO43313 823 aaPredicted RBP11.15□□□□□ -0.62
PABPC1-224ENST00000610907 FARP2O94887 1054 aaPredicted RBP11.15□□□□□ -0.62
PABPC1-224ENST00000610907 PROSCO94903 275 aa11.15□□□□□ -0.62
PABPC1-224ENST00000610907 VNN1O95497 513 aa11.15□□□□□ -0.62
PABPC1-224ENST00000610907 SLC25A27O95847 323 aa11.15□□□□□ -0.62
PABPC1-224ENST00000610907 CLTAP09496 248 aa11.15□□□□□ -0.62
PABPC1-224ENST00000610907 LCTP09848 1927 aa11.15□□□□□ -0.62
PABPC1-224ENST00000610907 RARAP10276 462 aa11.15□□□□□ -0.62
PABPC1-224ENST00000610907 UBA1P22314 1058 aaKnown RBP11.15□□□□□ -0.62
PABPC1-224ENST00000610907 ATP1A2P50993 1020 aa11.15□□□□□ -0.62
PABPC1-224ENST00000610907 PLTPP55058 493 aa11.15□□□□□ -0.62
PABPC1-224ENST00000610907 CORO7P57737 925 aa11.15□□□□□ -0.62
PABPC1-224ENST00000610907 CNTN2Q02246 1040 aa11.15□□□□□ -0.62
PABPC1-224ENST00000610907 IFFO1Q0D2I5 559 aa11.15□□□□□ -0.62
PABPC1-224ENST00000610907 PDCLQ13371 301 aa11.15□□□□□ -0.62
PABPC1-224ENST00000610907 BYSLQ13895 437 aaKnown RBP11.15□□□□□ -0.62
PABPC1-224ENST00000610907 IER5Q5VY09 327 aa11.15□□□□□ -0.62
PABPC1-224ENST00000610907 METTL7BQ6UX53 244 aa11.15□□□□□ -0.62
PABPC1-224ENST00000610907 SEPT14Q6ZU15 432 aa11.15□□□□□ -0.62
PABPC1-224ENST00000610907 MON1BQ7L1V2 547 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms