RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 TMEM63BQ5T3F8 832 aa14.6□□□□□ -0.07
NEK3-205ENST00000610828 AADACL2Q6P093 401 aa14.6□□□□□ -0.07
NEK3-205ENST00000610828 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.6□□□□□ -0.07
NEK3-205ENST00000610828 GOLGA6L1Q8N7Z2 621 aa14.6□□□□□ -0.07
NEK3-205ENST00000610828 OR5B17Q8NGF7 314 aa14.6□□□□□ -0.07
NEK3-205ENST00000610828 ATP8B4Q8TF62 1192 aa14.6□□□□□ -0.07
NEK3-205ENST00000610828 TCP11Q8WWU5 503 aa14.6□□□□□ -0.07
NEK3-205ENST00000610828 L3MBTL3Q96JM7 780 aaPredicted RBP14.6□□□□□ -0.07
NEK3-205ENST00000610828 RPS6KC1Q96S38 1066 aa14.6□□□□□ -0.07
NEK3-205ENST00000610828 CGRRF1Q99675 332 aa14.6□□□□□ -0.07
NEK3-205ENST00000610828 ZSWIM1Q9BR11 485 aa14.6□□□□□ -0.07
NEK3-205ENST00000610828 CELF4Q9BZC1 486 aaKnown RBP14.6□□□□□ -0.07
NEK3-205ENST00000610828 MROH8Q9H579 483 aa14.6□□□□□ -0.07
NEK3-205ENST00000610828 CNOT8Q9UFF9 292 aaKnown RBP14.6□□□□□ -0.07
NEK3-205ENST00000610828 PCDHB2Q9Y5E7 798 aa14.6□□□□□ -0.07
NEK3-205ENST00000610828 CNTNAP2Q9UHC6 1331 aa14.6□□□□□ -0.07
NEK3-205ENST00000610828 ZBTB42B2RXF5 422 aa14.6□□□□□ -0.07
NEK3-205ENST00000610828 SPOPO43791 374 aa14.6□□□□□ -0.07
NEK3-205ENST00000610828 MSCO60682 206 aa14.6□□□□□ -0.07
NEK3-205ENST00000610828 LGR5O75473 907 aa14.6□□□□□ -0.07
NEK3-205ENST00000610828 CYP2C8P10632 490 aa14.6□□□□□ -0.07
NEK3-205ENST00000610828 TNFSF9P41273 254 aa14.6□□□□□ -0.07
NEK3-205ENST00000610828 MKRN4PQ13434 485 aaPredicted RBP14.6□□□□□ -0.07
NEK3-205ENST00000610828 MXD4Q14582 209 aaPredicted RBP14.6□□□□□ -0.07
NEK3-205ENST00000610828 ZPBP2Q6X784 338 aa14.6□□□□□ -0.07
NEK3-205ENST00000610828 PLPPR4Q7Z2D5 763 aa14.6□□□□□ -0.07
NEK3-205ENST00000610828 DDX42Q86XP3 938 aaKnown RBP eCLIP14.6□□□□□ -0.07
NEK3-205ENST00000610828 WHAMMQ8TF30 809 aa14.6□□□□□ -0.07
NEK3-205ENST00000610828 TRAPPC12Q8WVT3 735 aa14.6□□□□□ -0.07
NEK3-205ENST00000610828 MRPL4Q9BYD3 311 aaKnown RBP14.6□□□□□ -0.07
NEK3-205ENST00000610828 APOBEC3GQ9HC16 384 aaKnown RBP14.6□□□□□ -0.07
NEK3-205ENST00000610828 UVRAGQ9P2Y5 699 aa14.6□□□□□ -0.07
NEK3-205ENST00000610828 PPME1Q9Y570 386 aa14.6□□□□□ -0.07
NEK3-205ENST00000610828 GOLGA6L10A0A0M3HER8 536 aa14.59□□□□□ -0.07
NEK3-205ENST00000610828 TOM1L1O75674 476 aa14.59□□□□□ -0.07
NEK3-205ENST00000610828 GJA5P36382 358 aa14.59□□□□□ -0.07
NEK3-205ENST00000610828 CUL1Q13616 776 aa14.59□□□□□ -0.07
NEK3-205ENST00000610828 CUL2Q13617 745 aa14.59□□□□□ -0.07
NEK3-205ENST00000610828 PLCB4Q15147 1175 aa14.59□□□□□ -0.07
NEK3-205ENST00000610828 MAPK6Q16659 721 aa14.59□□□□□ -0.07
NEK3-205ENST00000610828 ALS2CLQ60I27 953 aa14.59□□□□□ -0.07
NEK3-205ENST00000610828 RHPN2Q8IUC4 686 aa14.59□□□□□ -0.07
NEK3-205ENST00000610828 ZBTB8OSQ8IWT0 167 aa14.59□□□□□ -0.07
NEK3-205ENST00000610828 CPA5Q8WXQ8 436 aa14.59□□□□□ -0.07
NEK3-205ENST00000610828 FAM212AQ96EL1 285 aa14.59□□□□□ -0.07
NEK3-205ENST00000610828 ZNF668Q96K58 619 aaPredicted RBP14.59□□□□□ -0.07
NEK3-205ENST00000610828 EFCC1Q9HA90 598 aa14.59□□□□□ -0.07
NEK3-205ENST00000610828 PDGFCQ9NRA1 345 aa14.59□□□□□ -0.07
NEK3-205ENST00000610828 GAS2O43903 313 aaKnown RBP14.59□□□□□ -0.07
NEK3-205ENST00000610828 PRKCBP05771 671 aa14.59□□□□□ -0.07
NEK3-205ENST00000610828 UNGP13051 313 aaPredicted RBP14.59□□□□□ -0.07
NEK3-205ENST00000610828 BPIFB4P59827 614 aa14.59□□□□□ -0.07
NEK3-205ENST00000610828 NOP14P78316 857 aaKnown RBP14.59□□□□□ -0.07
NEK3-205ENST00000610828 SNAPC2Q13487 334 aa14.59□□□□□ -0.07
NEK3-205ENST00000610828 CCDC62Q6P9F0 684 aa14.59□□□□□ -0.07
NEK3-205ENST00000610828 TMEM270Q6UE05 265 aa14.59□□□□□ -0.07
NEK3-205ENST00000610828 ZNF677Q86XU0 584 aa14.59□□□□□ -0.07
NEK3-205ENST00000610828 CPNE8Q86YQ8 564 aa14.59□□□□□ -0.07
NEK3-205ENST00000610828 MORC4Q8TE76 937 aa14.59□□□□□ -0.07
NEK3-205ENST00000610828 ZIM3Q96PE6 472 aa14.59□□□□□ -0.07
NEK3-205ENST00000610828 CCDC113Q9H0I3 377 aa14.59□□□□□ -0.07
NEK3-205ENST00000610828 WNT8AQ9H1J5 351 aa14.59□□□□□ -0.07
NEK3-205ENST00000610828 ERVK-5Q9HDB9 667 aa14.59□□□□□ -0.07
NEK3-205ENST00000610828 PSD3Q9NYI0 1048 aa14.59□□□□□ -0.07
NEK3-205ENST00000610828 PCDHB4Q9Y5E5 795 aa14.59□□□□□ -0.07
NEK3-205ENST00000610828 GJB1P08034 283 aa14.58□□□□□ -0.08
NEK3-205ENST00000610828 ECHS1P30084 290 aa14.58□□□□□ -0.08
NEK3-205ENST00000610828 PTENP60484 403 aa14.58□□□□□ -0.08
NEK3-205ENST00000610828 NCOA4Q13772 614 aa14.58□□□□□ -0.08
NEK3-205ENST00000610828 CLUL1Q15846 466 aa14.58□□□□□ -0.08
NEK3-205ENST00000610828 CDCA2Q69YH5 1023 aaPredicted RBP14.58□□□□□ -0.08
NEK3-205ENST00000610828 BRSK2Q8IWQ3 736 aa14.58□□□□□ -0.08
NEK3-205ENST00000610828 EXOC8Q8IYI6 725 aa14.58□□□□□ -0.08
NEK3-205ENST00000610828 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.58□□□□□ -0.08
NEK3-205ENST00000610828 ACO2Q99798 780 aaKnown RBP14.58□□□□□ -0.08
NEK3-205ENST00000610828 UTP11Q9Y3A2 253 aaKnown RBP14.58□□□□□ -0.08
NEK3-205ENST00000610828 UMODL1Q5DID0 1318 aa14.58□□□□□ -0.08
NEK3-205ENST00000610828 IGKV6-21A0A0C4DH24 114 aa14.58□□□□□ -0.08
NEK3-205ENST00000610828 GOLGA6CA6NDK9 693 aa14.58□□□□□ -0.08
NEK3-205ENST00000610828 DAPK3O43293 454 aa14.58□□□□□ -0.08
NEK3-205ENST00000610828 OPA1O60313 960 aa14.58□□□□□ -0.08
NEK3-205ENST00000610828 GOLGA6DP0CG33 693 aa14.58□□□□□ -0.08
NEK3-205ENST00000610828 ACO1P21399 889 aaKnown RBP14.58□□□□□ -0.08
NEK3-205ENST00000610828 PEX5P50542 639 aa14.58□□□□□ -0.08
NEK3-205ENST00000610828 TTLL4Q14679 1199 aa14.58□□□□□ -0.08
NEK3-205ENST00000610828 CFAP58Q5T655 872 aa14.58□□□□□ -0.08
NEK3-205ENST00000610828 SEL1L2Q5TEA6 688 aa14.58□□□□□ -0.08
NEK3-205ENST00000610828 CD101Q93033 1021 aa14.58□□□□□ -0.08
NEK3-205ENST00000610828 ZBTB10Q96DT7 871 aa14.58□□□□□ -0.08
NEK3-205ENST00000610828 SLC10A4Q96EP9 437 aa14.58□□□□□ -0.08
NEK3-205ENST00000610828 NLRP4Q96MN2 994 aa14.58□□□□□ -0.08
NEK3-205ENST00000610828 IMPG2Q9BZV3 1241 aa14.58□□□□□ -0.08
NEK3-205ENST00000610828 SMARCAD1Q9H4L7 1026 aa14.58□□□□□ -0.08
NEK3-205ENST00000610828 ZNF408Q9H9D4 720 aa14.58□□□□□ -0.08
NEK3-205ENST00000610828 GOLGA6AQ9NYA3 693 aa14.58□□□□□ -0.08
NEK3-205ENST00000610828 ANAPC7Q9UJX3 599 aa14.58□□□□□ -0.08
NEK3-205ENST00000610828 NUB1Q9Y5A7 615 aa14.58□□□□□ -0.08
NEK3-205ENST00000610828 FAM189A1O60320 539 aa14.57□□□□□ -0.08
NEK3-205ENST00000610828 CLTAP09496 248 aa14.57□□□□□ -0.08
NEK3-205ENST00000610828 GNA15P30679 374 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms