RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 DUSP15Q9H1R2 295 aaPredicted RBP10.35□□□□□ -0.75
CTCFL-220ENST00000608858 CXCL16Q9H2A7 254 aa10.35□□□□□ -0.75
CTCFL-220ENST00000608858 COL4A3BPQ9Y5P4 624 aa10.35□□□□□ -0.75
CTCFL-220ENST00000608858 CDY1Q9Y6F8 540 aa10.35□□□□□ -0.75
CTCFL-220ENST00000608858 ASXL3Q9C0F0 2248 aa10.35□□□□□ -0.75
CTCFL-220ENST00000608858 TDRD15B5MCY1 1934 aaKnown RBP10.35□□□□□ -0.75
CTCFL-220ENST00000608858 NCANO14594 1321 aa10.34□□□□□ -0.75
CTCFL-220ENST00000608858 SPAG17Q6Q759 2223 aa10.34□□□□□ -0.75
CTCFL-220ENST00000608858 LNP1A1A4G5 178 aa10.34□□□□□ -0.75
CTCFL-220ENST00000608858 HEPACAM2A8MVW5 462 aa10.34□□□□□ -0.75
CTCFL-220ENST00000608858 CDX4O14627 284 aaPredicted RBP10.34□□□□□ -0.75
CTCFL-220ENST00000608858 MSH4O15457 936 aa10.34□□□□□ -0.75
CTCFL-220ENST00000608858 KIF4AO95239 1232 aa10.34□□□□□ -0.75
CTCFL-220ENST00000608858 CYP3A4P08684 503 aa10.34□□□□□ -0.75
CTCFL-220ENST00000608858 HOXA9P31269 272 aa10.34□□□□□ -0.75
CTCFL-220ENST00000608858 IRX4P78413 519 aa10.34□□□□□ -0.75
CTCFL-220ENST00000608858 LAMTOR4Q0VGL1 99 aa10.34□□□□□ -0.75
CTCFL-220ENST00000608858 RAB33AQ14088 237 aa10.34□□□□□ -0.75
CTCFL-220ENST00000608858 PLK5Q496M5 336 aa10.34□□□□□ -0.75
CTCFL-220ENST00000608858 XKR3Q5GH77 459 aa10.34□□□□□ -0.75
CTCFL-220ENST00000608858 PLEKHM2Q8IWE5 1019 aa10.34□□□□□ -0.75
CTCFL-220ENST00000608858 YAF2Q8IY57 180 aa10.34□□□□□ -0.75
CTCFL-220ENST00000608858 MB21D2Q8IYB1 491 aaPredicted RBP10.34□□□□□ -0.75
CTCFL-220ENST00000608858 CNNM3Q8NE01 707 aa10.34□□□□□ -0.75
CTCFL-220ENST00000608858 FAM200AQ8TCP9 573 aa10.34□□□□□ -0.75
CTCFL-220ENST00000608858 PIK3R5Q8WYR1 880 aa10.34□□□□□ -0.75
CTCFL-220ENST00000608858 SMARCD2Q92925 531 aa10.34□□□□□ -0.75
CTCFL-220ENST00000608858 RSPRY1Q96DX4 576 aa10.34□□□□□ -0.75
CTCFL-220ENST00000608858 NXF3Q9H4D5 531 aaKnown RBP10.34□□□□□ -0.75
CTCFL-220ENST00000608858 GTSE1Q9NYZ3 720 aa10.34□□□□□ -0.75
CTCFL-220ENST00000608858 NEUROG3Q9Y4Z2 214 aa10.34□□□□□ -0.75
CTCFL-220ENST00000608858 SLC12A7Q9Y666 1083 aa10.34□□□□□ -0.75
CTCFL-220ENST00000608858 SF3B1O75533 1304 aaKnown RBP eCLIP10.33□□□□□ -0.76
CTCFL-220ENST00000608858 WDR27A2RRH5 827 aa10.33□□□□□ -0.76
CTCFL-220ENST00000608858 SPECC1L-ADORA2AF8WAN1 911 aa10.33□□□□□ -0.76
CTCFL-220ENST00000608858 I3L4J1 428 aa10.33□□□□□ -0.76
CTCFL-220ENST00000608858 HIP1O00291 1037 aa10.33□□□□□ -0.76
CTCFL-220ENST00000608858 GAS7O60861 476 aa10.33□□□□□ -0.76
CTCFL-220ENST00000608858 PAPSS2O95340 614 aaPredicted RBP10.33□□□□□ -0.76
CTCFL-220ENST00000608858 LRG1P02750 347 aa10.33□□□□□ -0.76
CTCFL-220ENST00000608858 CAPNS1P04632 268 aa10.33□□□□□ -0.76
CTCFL-220ENST00000608858 MYL4P12829 197 aa10.33□□□□□ -0.76
CTCFL-220ENST00000608858 SIM1P81133 766 aaPredicted RBP10.33□□□□□ -0.76
CTCFL-220ENST00000608858 SCAPQ12770 1279 aa10.33□□□□□ -0.76
CTCFL-220ENST00000608858 PRSS36Q5K4E3 855 aa10.33□□□□□ -0.76
CTCFL-220ENST00000608858 DGKKQ5KSL6 1271 aa10.33□□□□□ -0.76
CTCFL-220ENST00000608858 ANO5Q75V66 913 aa10.33□□□□□ -0.76
CTCFL-220ENST00000608858 MIER3Q7Z3K6 550 aa10.33□□□□□ -0.76
CTCFL-220ENST00000608858 SRGAP1Q7Z6B7 1085 aa10.33□□□□□ -0.76
CTCFL-220ENST00000608858 MICU3Q86XE3 530 aa10.33□□□□□ -0.76
CTCFL-220ENST00000608858 PROSER1Q86XN7 944 aa10.33□□□□□ -0.76
CTCFL-220ENST00000608858 MFSD6LQ8IWD5 586 aa10.33□□□□□ -0.76
CTCFL-220ENST00000608858 RNF149Q8NC42 400 aa10.33□□□□□ -0.76
CTCFL-220ENST00000608858 ZSCAN18Q8TBC5 510 aaPredicted RBP10.33□□□□□ -0.76
CTCFL-220ENST00000608858 ZC3H10Q96K80 434 aaKnown RBP10.33□□□□□ -0.76
CTCFL-220ENST00000608858 TRIM6Q9C030 488 aaPredicted RBP10.33□□□□□ -0.76
CTCFL-220ENST00000608858 TMEM9BQ9NQ34 198 aa10.33□□□□□ -0.76
CTCFL-220ENST00000608858 SLC8A2Q9UPR5 921 aa10.33□□□□□ -0.76
CTCFL-220ENST00000608858 GIT1Q9Y2X7 761 aa10.33□□□□□ -0.76
CTCFL-220ENST00000608858 PCDHGA5Q9Y5G8 931 aa10.33□□□□□ -0.76
CTCFL-220ENST00000608858 NAV2Q8IVL1 2488 aa10.33□□□□□ -0.76
CTCFL-220ENST00000608858 BCLAF3A2AJT9 711 aaKnown RBP10.32□□□□□ -0.76
CTCFL-220ENST00000608858 SH2B2O14492 632 aaPredicted RBP10.32□□□□□ -0.76
CTCFL-220ENST00000608858 PRRG1O14668 218 aa10.32□□□□□ -0.76
CTCFL-220ENST00000608858 KHNYNO15037 678 aaKnown RBP10.32□□□□□ -0.76
CTCFL-220ENST00000608858 TSPAN1O60635 241 aa10.32□□□□□ -0.76
CTCFL-220ENST00000608858 ERLIN2O94905 339 aa10.32□□□□□ -0.76
CTCFL-220ENST00000608858 SEC24AO95486 1093 aa10.32□□□□□ -0.76
CTCFL-220ENST00000608858 NPTXRO95502 500 aa10.32□□□□□ -0.76
CTCFL-220ENST00000608858 CSRP1P21291 193 aaKnown RBP10.32□□□□□ -0.76
CTCFL-220ENST00000608858 GBP1P32455 592 aa10.32□□□□□ -0.76
CTCFL-220ENST00000608858 ELF1P32519 619 aa10.32□□□□□ -0.76
CTCFL-220ENST00000608858 MAPK8P45983 427 aa10.32□□□□□ -0.76
CTCFL-220ENST00000608858 AP3B2Q13367 1082 aa10.32□□□□□ -0.76
CTCFL-220ENST00000608858 TEAD2Q15562 447 aa10.32□□□□□ -0.76
CTCFL-220ENST00000608858 CYP4A22Q5TCH4 519 aa10.32□□□□□ -0.76
CTCFL-220ENST00000608858 LRCH2Q5VUJ6 765 aa10.32□□□□□ -0.76
CTCFL-220ENST00000608858 PDZD4Q76G19 769 aaPredicted RBP10.32□□□□□ -0.76
CTCFL-220ENST00000608858 GPR65Q8IYL9 337 aa10.32□□□□□ -0.76
CTCFL-220ENST00000608858 ABCA7Q8IZY2 2146 aa10.32□□□□□ -0.76
CTCFL-220ENST00000608858 PDCD7Q8N8D1 485 aaKnown RBP10.32□□□□□ -0.76
CTCFL-220ENST00000608858 CRYGNQ8WXF5 182 aa10.32□□□□□ -0.76
CTCFL-220ENST00000608858 CCDC136Q96JN2 1154 aa10.32□□□□□ -0.76
CTCFL-220ENST00000608858 HHIPQ96QV1 700 aa10.32□□□□□ -0.76
CTCFL-220ENST00000608858 CSRNP2Q9H175 543 aa10.32□□□□□ -0.76
CTCFL-220ENST00000608858 CYP4F11Q9HBI6 524 aa10.32□□□□□ -0.76
CTCFL-220ENST00000608858 TRPV5Q9NQA5 729 aa10.32□□□□□ -0.76
CTCFL-220ENST00000608858 INO80B-WBP1J3KQ70 363 aa10.31□□□□□ -0.76
CTCFL-220ENST00000608858 ARNTLO00327 626 aa10.31□□□□□ -0.76
CTCFL-220ENST00000608858 ZNF197O14709 1029 aa10.31□□□□□ -0.76
CTCFL-220ENST00000608858 MEFVO15553 781 aaPredicted RBP10.31□□□□□ -0.76
CTCFL-220ENST00000608858 B4GALT5O43286 388 aa10.31□□□□□ -0.76
CTCFL-220ENST00000608858 EDIL3O43854 480 aa10.31□□□□□ -0.76
CTCFL-220ENST00000608858 MOSPD3O75425 235 aa10.31□□□□□ -0.76
CTCFL-220ENST00000608858 RHOBTB1O94844 696 aa10.31□□□□□ -0.76
CTCFL-220ENST00000608858 HOXA6P31267 233 aa10.31□□□□□ -0.76
CTCFL-220ENST00000608858 FAM193AP78312 1265 aa10.31□□□□□ -0.76
CTCFL-220ENST00000608858 SETQ01105 290 aaPredicted RBP10.31□□□□□ -0.76
CTCFL-220ENST00000608858 TNK2Q07912 1038 aa10.31□□□□□ -0.76
CTCFL-220ENST00000608858 NCBP1Q09161 790 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms