RNA–Protein interactions for RNA: ENST00000608254.1

PTCHD1-AS-202, Transcript of PTCHD1 antisense RNA (head to head), humanhuman

TSL 4 BASIC

Gene PTCHD1-AS, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-AS-202ENST00000608254 PCDHB12Q9Y5F1 795 aa13.02□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 C5orf67F2Z3F1 127 aa13.01□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 ZC3H11AO75152 810 aaKnown RBP eCLIP13.01□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 AKAP3O75969 853 aa13.01□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 GALTP07902 379 aa13.01□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 PPM1AP35813 382 aa13.01□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 CASP4P49662 377 aa13.01□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 BCAR1P56945 870 aa13.01□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 STX17P56962 302 aa13.01□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 ENPEPQ07075 957 aa13.01□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 TMEM132DQ14C87 1099 aa13.01□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 PSMD6Q15008 389 aa13.01□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 EPC2Q52LR7 807 aa13.01□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 CEP135Q66GS9 1140 aa13.01□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 JADE1Q6IE81 842 aa13.01□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 KCNT2Q6UVM3 1135 aa13.01□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 COLGALT1Q8NBJ5 622 aa13.01□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 DDX27Q96GQ7 796 aaKnown RBP13.01□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 LRCH3Q96II8 777 aa13.01□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 CEP63Q96MT8 703 aa13.01□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 UROC1Q96N76 676 aa13.01□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 DUSP9Q99956 384 aaKnown RBP13.01□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 C17orf80Q9BSJ5 609 aa13.01□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 MKNK1Q9BUB5 465 aa13.01□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 ZNF576Q9H609 170 aa13.01□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 PDE11AQ9HCR9 933 aa13.01□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 DNAJB4Q9UDY4 337 aa13.01□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 NRP1O14786 923 aa13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 SLC16A3O15427 465 aaKnown RBP13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 B4GALT3O60512 393 aa13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 FGFR1OPO95684 399 aaKnown RBP13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 NFICP08651 508 aa13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 CCDC192P0DO97 292 aa13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 EPB41P11171 864 aaKnown RBP13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 RPL9P32969 192 aaKnown RBP13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 CTNNB1P35222 781 aa13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 OR1G1P47890 313 aa13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 SLC11A1P49279 550 aa13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 WNT7BP56706 349 aa13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 MCCD1P59942 119 aaPredicted RBP13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 TYRO3Q06418 890 aa13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 SPAG1Q07617 926 aa13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 SPATA1Q5VX52 437 aa13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 INTS8Q75QN2 995 aaKnown RBP13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 FILIP1Q7Z7B0 1213 aa13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 USP37Q86T82 979 aa13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 FAM186BQ8IYM0 893 aa13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 CSGALNACT2Q8N6G5 542 aa13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 BEST2Q8NFU1 509 aa13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 TMC2Q8TDI7 906 aa13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 CACTINQ8WUQ7 758 aaKnown RBP13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 C18orf25Q96B23 403 aaPredicted RBP13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 CCDC127Q96BQ5 260 aa13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 FNBP1Q96RU3 617 aa13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 C11orf84Q9BUA3 381 aaPredicted RBP13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 COLEC11Q9BWP8 271 aa13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 SPG21Q9NZD8 308 aa13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 FAN1Q9Y2M0 1017 aa13□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 CASTOR2A6NHX0 329 aa12.99□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 TULP1O00294 542 aaPredicted RBP12.99□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 GNA14O95837 355 aa12.99□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 KRT13P13646 458 aa12.99□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 LRPAP1P30533 357 aa12.99□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 AP3M2P53677 418 aa12.99□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 CLDN10P78369 228 aa12.99□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 TFAMQ00059 246 aaKnown RBP12.99□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 PLCB3Q01970 1234 aa12.99□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 SOX4Q06945 474 aaPredicted RBP12.99□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 DUOXA2Q1HG44 320 aa12.99□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 ZSCAN23Q3MJ62 389 aa12.99□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 ZNF697Q5TEC3 545 aa12.99□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 DCLRE1AQ6PJP8 1040 aa12.99□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 SPRED2Q7Z698 418 aa12.99□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 WDR49Q8IV35 697 aa12.99□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 EFCAB13Q8IY85 973 aa12.99□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 SLC39A11Q8N1S5 342 aa12.99□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 FBXO22Q8NEZ5 403 aa12.99□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 PARD3BQ8TEW8 1205 aa12.99□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 ARNTL2Q8WYA1 636 aa12.99□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 EEF2KMTQ96G04 330 aa12.99□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 MED15Q96RN5 788 aa12.99□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 CGRRF1Q99675 332 aa12.99□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 INTS13Q9NVM9 706 aa12.99□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 STK39Q9UEW8 545 aa12.99□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 TUBGCP4Q9UGJ1 667 aa12.99□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 MTUS1Q9ULD2 1270 aa12.99□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 PTPRSQ13332 1948 aa12.98□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 SYCE3A1L190 88 aa12.98□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 NT5C1B-RDH14C9J2C7 533 aa12.98□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 H3BNC9 293 aa12.98□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 TMEM189-UBE2V1I3L0A0 370 aa12.98□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 IKBKBO14920 756 aa12.98□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 FGF18O76093 207 aa12.98□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 TMEM191BP0C7N4 346 aa12.98□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 DLATP10515 647 aaKnown RBP12.98□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 TNNI1P19237 187 aa12.98□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 PBX3P40426 434 aa12.98□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 CLCNKBP51801 687 aa12.98□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 KRT17Q04695 432 aa12.98□□□□□ -0.33
PTCHD1-AS-202ENST00000608254 UPP1Q16831 310 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms