RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 FAM43BQ6ZT52 329 aaPredicted RBP11.48□□□□□ -0.57
LINC01001-203ENST00000607448 CDR2LQ86X02 465 aaPredicted RBP11.48□□□□□ -0.57
LINC01001-203ENST00000607448 LRRC43Q8N309 656 aa11.48□□□□□ -0.57
LINC01001-203ENST00000607448 EHBP1Q8NDI1 1231 aa11.48□□□□□ -0.57
LINC01001-203ENST00000607448 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.48□□□□□ -0.57
LINC01001-203ENST00000607448 BSNDQ8WZ55 320 aa11.48□□□□□ -0.57
LINC01001-203ENST00000607448 CCDC43Q96MW1 224 aaKnown RBP11.48□□□□□ -0.57
LINC01001-203ENST00000607448 MMTAG2Q9BU76 263 aaKnown RBP11.48□□□□□ -0.57
LINC01001-203ENST00000607448 EIF2AQ9BY44 585 aaKnown RBP11.48□□□□□ -0.57
LINC01001-203ENST00000607448 RAB34Q9BZG1 259 aa11.48□□□□□ -0.57
LINC01001-203ENST00000607448 LMAN2LQ9H0V9 348 aa11.48□□□□□ -0.57
LINC01001-203ENST00000607448 HAUS4Q9H6D7 363 aa11.48□□□□□ -0.57
LINC01001-203ENST00000607448 ARFGAP3Q9NP61 516 aa11.48□□□□□ -0.57
LINC01001-203ENST00000607448 LRWD1Q9UFC0 647 aa11.48□□□□□ -0.57
LINC01001-203ENST00000607448 DBR1Q9UK59 544 aaKnown RBP11.48□□□□□ -0.57
LINC01001-203ENST00000607448 PVALEFA0A1B0GWK0 134 aa11.47□□□□□ -0.57
LINC01001-203ENST00000607448 CCDC151A5D8V7 595 aa11.47□□□□□ -0.57
LINC01001-203ENST00000607448 NT5C1B-RDH14C9J2C7 533 aa11.47□□□□□ -0.57
LINC01001-203ENST00000607448 ASAP2O43150 1006 aa11.47□□□□□ -0.57
LINC01001-203ENST00000607448 FGFR1OPO95684 399 aaKnown RBP11.47□□□□□ -0.57
LINC01001-203ENST00000607448 EDN1P05305 212 aa11.47□□□□□ -0.57
LINC01001-203ENST00000607448 PLCG1P19174 1290 aa11.47□□□□□ -0.57
LINC01001-203ENST00000607448 KRT83P78385 493 aa11.47□□□□□ -0.57
LINC01001-203ENST00000607448 MXD4Q14582 209 aaPredicted RBP11.47□□□□□ -0.57
LINC01001-203ENST00000607448 TERF2Q15554 542 aa11.47□□□□□ -0.57
LINC01001-203ENST00000607448 FIGNQ5HY92 759 aa11.47□□□□□ -0.57
LINC01001-203ENST00000607448 CC2D1AQ6P1N0 951 aaPredicted RBP11.47□□□□□ -0.57
LINC01001-203ENST00000607448 AGMOQ6ZNB7 445 aa11.47□□□□□ -0.57
LINC01001-203ENST00000607448 KCNK18Q7Z418 384 aa11.47□□□□□ -0.57
LINC01001-203ENST00000607448 TMEM173Q86WV6 379 aaPredicted RBP11.47□□□□□ -0.57
LINC01001-203ENST00000607448 THNSL1Q8IYQ7 743 aa11.47□□□□□ -0.57
LINC01001-203ENST00000607448 ABI1Q8IZP0 508 aa11.47□□□□□ -0.57
LINC01001-203ENST00000607448 SMG8Q8ND04 991 aaKnown RBP11.47□□□□□ -0.57
LINC01001-203ENST00000607448 SNX29Q8TEQ0 813 aa11.47□□□□□ -0.57
LINC01001-203ENST00000607448 NACC1Q96RE7 527 aa11.47□□□□□ -0.57
LINC01001-203ENST00000607448 UHRF1Q96T88 793 aaPredicted RBP11.47□□□□□ -0.57
LINC01001-203ENST00000607448 TRIM9Q9C026 710 aa11.47□□□□□ -0.57
LINC01001-203ENST00000607448 IGFLR1Q9H665 355 aa11.47□□□□□ -0.57
LINC01001-203ENST00000607448 CLDND1Q9NY35 253 aa11.47□□□□□ -0.57
LINC01001-203ENST00000607448 KIAA1024Q9UPX6 916 aa11.47□□□□□ -0.57
LINC01001-203ENST00000607448 PCDHB2Q9Y5E7 798 aa11.47□□□□□ -0.57
LINC01001-203ENST00000607448 EPN1Q9Y6I3 576 aaPredicted RBP11.47□□□□□ -0.57
LINC01001-203ENST00000607448 TTLL13PA6NNM8 815 aa11.46□□□□□ -0.57
LINC01001-203ENST00000607448 E9PMD0 336 aa11.46□□□□□ -0.57
LINC01001-203ENST00000607448 INO80B-WBP1J3KQ70 363 aa11.46□□□□□ -0.57
LINC01001-203ENST00000607448 HOXA2O43364 376 aa11.46□□□□□ -0.57
LINC01001-203ENST00000607448 SLC26A4O43511 780 aa11.46□□□□□ -0.57
LINC01001-203ENST00000607448 TBX10O75333 385 aa11.46□□□□□ -0.57
LINC01001-203ENST00000607448 NDUFA10O95299 355 aa11.46□□□□□ -0.57
LINC01001-203ENST00000607448 IL9P15248 144 aa11.46□□□□□ -0.57
LINC01001-203ENST00000607448 CYLC1P35663 651 aaPredicted RBP11.46□□□□□ -0.57
LINC01001-203ENST00000607448 ARHGAP25P42331 645 aa11.46□□□□□ -0.57
LINC01001-203ENST00000607448 CDK17Q00537 523 aa11.46□□□□□ -0.57
LINC01001-203ENST00000607448 MEA1Q16626 185 aa11.46□□□□□ -0.57
LINC01001-203ENST00000607448 CTC1Q2NKJ3 1217 aa11.46□□□□□ -0.57
LINC01001-203ENST00000607448 HAUS3Q68CZ6 603 aa11.46□□□□□ -0.57
LINC01001-203ENST00000607448 PADI6Q6TGC4 694 aa11.46□□□□□ -0.57
LINC01001-203ENST00000607448 KCNT2Q6UVM3 1135 aa11.46□□□□□ -0.57
LINC01001-203ENST00000607448 EP400NLQ6ZTU2 488 aa11.46□□□□□ -0.57
LINC01001-203ENST00000607448 RBM23Q86U06 439 aaKnown RBP11.46□□□□□ -0.57
LINC01001-203ENST00000607448 IFNLR1Q8IU57 520 aaPredicted RBP11.46□□□□□ -0.57
LINC01001-203ENST00000607448 CCDC170Q8IYT3 715 aa11.46□□□□□ -0.57
LINC01001-203ENST00000607448 SLC35F6Q8N357 371 aa11.46□□□□□ -0.57
LINC01001-203ENST00000607448 CSGALNACT2Q8N6G5 542 aa11.46□□□□□ -0.57
LINC01001-203ENST00000607448 ERMNQ8TAM6 284 aa11.46□□□□□ -0.57
LINC01001-203ENST00000607448 HNRNPLLQ8WVV9 542 aaKnown RBP11.46□□□□□ -0.57
LINC01001-203ENST00000607448 PABPC5Q96DU9 382 aaKnown RBP11.46□□□□□ -0.57
LINC01001-203ENST00000607448 GBP3Q9H0R5 595 aa11.46□□□□□ -0.57
LINC01001-203ENST00000607448 BHMT2Q9H2M3 363 aa11.46□□□□□ -0.57
LINC01001-203ENST00000607448 RNF39Q9H2S5 420 aa11.46□□□□□ -0.57
LINC01001-203ENST00000607448 RNF216Q9NWF9 866 aaPredicted RBP11.46□□□□□ -0.57
LINC01001-203ENST00000607448 ZNHIT6Q9NWK9 470 aaKnown RBP11.46□□□□□ -0.57
LINC01001-203ENST00000607448 DNAJB4Q9UDY4 337 aa11.46□□□□□ -0.57
LINC01001-203ENST00000607448 INPP5FQ9Y2H2 1132 aa11.46□□□□□ -0.57
LINC01001-203ENST00000607448 USP20Q9Y2K6 914 aa11.46□□□□□ -0.57
LINC01001-203ENST00000607448 HES2Q9Y543 173 aa11.46□□□□□ -0.57
LINC01001-203ENST00000607448 PCDHB12Q9Y5F1 795 aa11.46□□□□□ -0.57
LINC01001-203ENST00000607448 A0A1W2PQJ5 194 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 TTC26A0AVF1 554 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 ZNF623O75123 536 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 ERLIN1O75477 346 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 ERLIN2O94905 339 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 GLP2RO95838 553 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 ARF4P18085 180 aaPredicted RBP11.45□□□□□ -0.58
LINC01001-203ENST00000607448 LAG3P18627 525 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 ASIC1P78348 528 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 POU5F1BQ06416 359 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 PDIA5Q14554 519 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 CLUL1Q15846 466 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 AAK1Q2M2I8 961 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 SV2BQ7L1I2 683 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 ZNF771Q7L3S4 317 aaPredicted RBP11.45□□□□□ -0.58
LINC01001-203ENST00000607448 ZNF280BQ86YH2 543 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 MSANTD4Q8NCY6 345 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 ACRBPQ8NEB7 543 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 BCL7CQ8WUZ0 217 aaPredicted RBP11.45□□□□□ -0.58
LINC01001-203ENST00000607448 DUSP9Q99956 384 aaKnown RBP11.45□□□□□ -0.58
LINC01001-203ENST00000607448 TUBGCP2Q9BSJ2 902 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 KIFC3Q9BVG8 833 aa11.45□□□□□ -0.58
LINC01001-203ENST00000607448 PARD6BQ9BYG5 372 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms