RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 CUL4AQ13619 759 aa14.76□□□□□ -0.05
CTSA-212ENST00000606394 CAPSQ13938 189 aa14.76□□□□□ -0.05
CTSA-212ENST00000606394 CSRP2Q16527 193 aa14.76□□□□□ -0.05
CTSA-212ENST00000606394 BLOC1S2Q6QNY1 142 aa14.76□□□□□ -0.05
CTSA-212ENST00000606394 RABGGTAQ92696 567 aa14.76□□□□□ -0.05
CTSA-212ENST00000606394 IRF7Q92985 503 aa14.76□□□□□ -0.05
CTSA-212ENST00000606394 TMX3Q96JJ7 454 aa14.76□□□□□ -0.05
CTSA-212ENST00000606394 NAP1L4Q99733 375 aaKnown RBP14.76□□□□□ -0.05
CTSA-212ENST00000606394 PAAF1Q9BRP4 392 aa14.76□□□□□ -0.05
CTSA-212ENST00000606394 TM6SF1Q9BZW5 370 aa14.76□□□□□ -0.05
CTSA-212ENST00000606394 SEMA4GQ9NTN9 838 aa14.76□□□□□ -0.05
CTSA-212ENST00000606394 HCFC1R1Q9NWW0 138 aa14.76□□□□□ -0.05
CTSA-212ENST00000606394 KLK14Q9P0G3 267 aa14.76□□□□□ -0.05
CTSA-212ENST00000606394 MTRRQ9UBK8 725 aa14.76□□□□□ -0.05
CTSA-212ENST00000606394 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.76□□□□□ -0.05
CTSA-212ENST00000606394 FRYQ5TBA9 3013 aa14.75□□□□□ -0.05
CTSA-212ENST00000606394 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.75□□□□□ -0.05
CTSA-212ENST00000606394 TMEM189-UBE2V1I3L0A0 370 aa14.75□□□□□ -0.05
CTSA-212ENST00000606394 ADAM12O43184 909 aa14.75□□□□□ -0.05
CTSA-212ENST00000606394 TRAK2O60296 914 aa14.75□□□□□ -0.05
CTSA-212ENST00000606394 LYPLA2O95372 231 aa14.75□□□□□ -0.05
CTSA-212ENST00000606394 RHOP08100 348 aa14.75□□□□□ -0.05
CTSA-212ENST00000606394 PDIA3P30101 505 aaKnown RBP14.75□□□□□ -0.05
CTSA-212ENST00000606394 ARL2P36404 184 aa14.75□□□□□ -0.05
CTSA-212ENST00000606394 SSRP1Q08945 709 aaKnown RBP14.75□□□□□ -0.05
CTSA-212ENST00000606394 SPIRE1Q08AE8 756 aa14.75□□□□□ -0.05
CTSA-212ENST00000606394 NPY5RQ15761 445 aa14.75□□□□□ -0.05
CTSA-212ENST00000606394 INF2Q27J81 1249 aa14.75□□□□□ -0.05
CTSA-212ENST00000606394 PPP4R3CPQ6ZMV5 832 aa14.75□□□□□ -0.05
CTSA-212ENST00000606394 PRR23CQ6ZRP0 262 aa14.75□□□□□ -0.05
CTSA-212ENST00000606394 HASPINQ8TF76 798 aa14.75□□□□□ -0.05
CTSA-212ENST00000606394 ANKEF1Q9NU02 776 aa14.75□□□□□ -0.05
CTSA-212ENST00000606394 PRMT7Q9NVM4 692 aaPredicted RBP14.75□□□□□ -0.05
CTSA-212ENST00000606394 RGL1Q9NZL6 768 aa14.75□□□□□ -0.05
CTSA-212ENST00000606394 BACE2Q9Y5Z0 518 aa14.75□□□□□ -0.05
CTSA-212ENST00000606394 ZZEF1O43149 2961 aa14.74□□□□□ -0.05
CTSA-212ENST00000606394 ARHGEF37A1IGU5 675 aa14.74□□□□□ -0.05
CTSA-212ENST00000606394 CASTOR2A6NHX0 329 aa14.74□□□□□ -0.05
CTSA-212ENST00000606394 PTGESO14684 152 aa14.74□□□□□ -0.05
CTSA-212ENST00000606394 B4GALT5O43286 388 aa14.74□□□□□ -0.05
CTSA-212ENST00000606394 CPA1P15085 419 aa14.74□□□□□ -0.05
CTSA-212ENST00000606394 PTPN2P17706 415 aa14.74□□□□□ -0.05
CTSA-212ENST00000606394 FGFR3P22607 806 aa14.74□□□□□ -0.05
CTSA-212ENST00000606394 RPS6KB1P23443 525 aa14.74□□□□□ -0.05
CTSA-212ENST00000606394 MLLT6P55198 1093 aaPredicted RBP14.74□□□□□ -0.05
CTSA-212ENST00000606394 SLC5A9Q2M3M2 681 aa14.74□□□□□ -0.05
CTSA-212ENST00000606394 TANGO2Q6ICL3 276 aa14.74□□□□□ -0.05
CTSA-212ENST00000606394 C1orf228Q6PIY5 440 aa14.74□□□□□ -0.05
CTSA-212ENST00000606394 NEK8Q86SG6 692 aa14.74□□□□□ -0.05
CTSA-212ENST00000606394 SLFN12Q8IYM2 578 aa14.74□□□□□ -0.05
CTSA-212ENST00000606394 ASAP3Q8TDY4 903 aa14.74□□□□□ -0.05
CTSA-212ENST00000606394 ING5Q8WYH8 240 aa14.74□□□□□ -0.05
CTSA-212ENST00000606394 HAS1Q92839 578 aa14.74□□□□□ -0.05
CTSA-212ENST00000606394 MCRS1Q96EZ8 462 aa14.74□□□□□ -0.05
CTSA-212ENST00000606394 DYDC2Q96IM9 177 aa14.74□□□□□ -0.05
CTSA-212ENST00000606394 TRMT61BQ9BVS5 477 aaKnown RBP14.74□□□□□ -0.05
CTSA-212ENST00000606394 PLA2G2FQ9BZM2 168 aa14.74□□□□□ -0.05
CTSA-212ENST00000606394 BRD9Q9H8M2 597 aa14.74□□□□□ -0.05
CTSA-212ENST00000606394 ZSWIM6Q9HCJ5 1215 aa14.74□□□□□ -0.05
CTSA-212ENST00000606394 ZFP14Q9HCL3 533 aa14.74□□□□□ -0.05
CTSA-212ENST00000606394 ANGPTL2Q9UKU9 493 aa14.74□□□□□ -0.05
CTSA-212ENST00000606394 VWA8A3KMH1 1905 aa14.74□□□□□ -0.05
CTSA-212ENST00000606394 ASPMQ8IZT6 3477 aa14.74□□□□□ -0.05
CTSA-212ENST00000606394 CCDC194A0A1B0GVG4 234 aa14.73□□□□□ -0.05
CTSA-212ENST00000606394 ZNF197O14709 1029 aa14.73□□□□□ -0.05
CTSA-212ENST00000606394 ZBTB39O15060 712 aa14.73□□□□□ -0.05
CTSA-212ENST00000606394 MARCH6O60337 910 aa14.73□□□□□ -0.05
CTSA-212ENST00000606394 SLITRK3O94933 977 aa14.73□□□□□ -0.05
CTSA-212ENST00000606394 PAPSS2O95340 614 aaPredicted RBP14.73□□□□□ -0.05
CTSA-212ENST00000606394 GLRA2P23416 452 aa14.73□□□□□ -0.05
CTSA-212ENST00000606394 FCARP24071 287 aa14.73□□□□□ -0.05
CTSA-212ENST00000606394 CXCL12P48061 93 aa14.73□□□□□ -0.05
CTSA-212ENST00000606394 SHC2P98077 582 aa14.73□□□□□ -0.05
CTSA-212ENST00000606394 DMWDQ09019 674 aa14.73□□□□□ -0.05
CTSA-212ENST00000606394 SIM2Q14190 667 aaPredicted RBP14.73□□□□□ -0.05
CTSA-212ENST00000606394 NAB2Q15742 525 aa14.73□□□□□ -0.05
CTSA-212ENST00000606394 LPAL2Q16609 132 aa14.73□□□□□ -0.05
CTSA-212ENST00000606394 FAM187BQ17R55 369 aa14.73□□□□□ -0.05
CTSA-212ENST00000606394 L1TD1Q5T7N2 865 aaKnown RBP14.73□□□□□ -0.05
CTSA-212ENST00000606394 PRR23BQ6ZRT6 265 aa14.73□□□□□ -0.05
CTSA-212ENST00000606394 ANKS3Q6ZW76 656 aa14.73□□□□□ -0.05
CTSA-212ENST00000606394 RUFY3Q7L099 469 aa14.73□□□□□ -0.05
CTSA-212ENST00000606394 TPH2Q8IWU9 490 aa14.73□□□□□ -0.05
CTSA-212ENST00000606394 ZNF461Q8TAF7 563 aa14.73□□□□□ -0.05
CTSA-212ENST00000606394 FAM3CQ92520 227 aa14.73□□□□□ -0.05
CTSA-212ENST00000606394 MSANTD3Q96H12 275 aa14.73□□□□□ -0.05
CTSA-212ENST00000606394 NCOA5Q9HCD5 579 aaKnown RBP14.73□□□□□ -0.05
CTSA-212ENST00000606394 CACNG4Q9UBN1 327 aa14.73□□□□□ -0.05
CTSA-212ENST00000606394 NDRG2Q9UN36 371 aaKnown RBP14.73□□□□□ -0.05
CTSA-212ENST00000606394 CYP46A1Q9Y6A2 500 aa14.73□□□□□ -0.05
CTSA-212ENST00000606394 CDY1Q9Y6F8 540 aa14.73□□□□□ -0.05
CTSA-212ENST00000606394 TCHHQ07283 1943 aa14.72□□□□□ -0.05
CTSA-212ENST00000606394 RALGAPA1Q6GYQ0 2036 aa14.72□□□□□ -0.05
CTSA-212ENST00000606394 TRAPPC3O43617 180 aa14.72□□□□□ -0.05
CTSA-212ENST00000606394 CCNT1O60563 726 aaKnown RBP14.72□□□□□ -0.05
CTSA-212ENST00000606394 BAG4O95429 457 aaKnown RBP14.72□□□□□ -0.05
CTSA-212ENST00000606394 PSMC3P17980 439 aa14.72□□□□□ -0.05
CTSA-212ENST00000606394 LIMK1P53667 647 aa14.72□□□□□ -0.05
CTSA-212ENST00000606394 CCT2P78371 535 aaKnown RBP14.72□□□□□ -0.05
CTSA-212ENST00000606394 CYP4A11Q02928 519 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms