RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 C3orf58Q8NDZ4 430 aa14.45□□□□□ -0.1
RPS28-204ENST00000602140 FGF14Q92915 247 aa14.45□□□□□ -0.1
RPS28-204ENST00000602140 UROC1Q96N76 676 aa14.45□□□□□ -0.1
RPS28-204ENST00000602140 RPP25Q9BUL9 199 aaKnown RBP14.45□□□□□ -0.1
RPS28-204ENST00000602140 CCDC94Q9BW85 323 aaPredicted RBP14.45□□□□□ -0.1
RPS28-204ENST00000602140 MRPL4Q9BYD3 311 aaKnown RBP14.45□□□□□ -0.1
RPS28-204ENST00000602140 CDT1Q9H211 546 aa14.45□□□□□ -0.1
RPS28-204ENST00000602140 TMEM134Q9H6X4 195 aa14.45□□□□□ -0.1
RPS28-204ENST00000602140 MTRRQ9UBK8 725 aa14.45□□□□□ -0.1
RPS28-204ENST00000602140 CDH7Q9ULB5 785 aa14.45□□□□□ -0.1
RPS28-204ENST00000602140 I3L4J1 428 aa14.44□□□□□ -0.1
RPS28-204ENST00000602140 LAD1O00515 517 aa14.44□□□□□ -0.1
RPS28-204ENST00000602140 TRAPPC3O43617 180 aa14.44□□□□□ -0.1
RPS28-204ENST00000602140 TKTP29401 623 aaKnown RBP14.44□□□□□ -0.1
RPS28-204ENST00000602140 GRM5P41594 1212 aa14.44□□□□□ -0.1
RPS28-204ENST00000602140 BRCC3P46736 316 aa14.44□□□□□ -0.1
RPS28-204ENST00000602140 SOX4Q06945 474 aaPredicted RBP14.44□□□□□ -0.1
RPS28-204ENST00000602140 DMP1Q13316 513 aaPredicted RBP14.44□□□□□ -0.1
RPS28-204ENST00000602140 UVSSAQ2YD98 709 aa14.44□□□□□ -0.1
RPS28-204ENST00000602140 RINT1Q6NUQ1 792 aa14.44□□□□□ -0.1
RPS28-204ENST00000602140 PARM1Q6UWI2 310 aa14.44□□□□□ -0.1
RPS28-204ENST00000602140 DTHD1Q6ZMT9 781 aa14.44□□□□□ -0.1
RPS28-204ENST00000602140 TAS1R3Q7RTX0 852 aa14.44□□□□□ -0.1
RPS28-204ENST00000602140 ITFG1Q8TB96 612 aa14.44□□□□□ -0.1
RPS28-204ENST00000602140 FGF13Q92913 245 aa14.44□□□□□ -0.1
RPS28-204ENST00000602140 NKD2Q969F2 451 aaPredicted RBP14.44□□□□□ -0.1
RPS28-204ENST00000602140 DRC1Q96MC2 740 aa14.44□□□□□ -0.1
RPS28-204ENST00000602140 RUSC1Q9BVN2 902 aa14.44□□□□□ -0.1
RPS28-204ENST00000602140 TARS2Q9BW92 718 aaKnown RBP14.44□□□□□ -0.1
RPS28-204ENST00000602140 PTPRHQ9HD43 1115 aa14.44□□□□□ -0.1
RPS28-204ENST00000602140 KMT5AQ9NQR1 393 aa14.44□□□□□ -0.1
RPS28-204ENST00000602140 ARHGEF3Q9NR81 526 aa14.44□□□□□ -0.1
RPS28-204ENST00000602140 TOPORSQ9NS56 1045 aaPredicted RBP14.44□□□□□ -0.1
RPS28-204ENST00000602140 HCFC1R1Q9NWW0 138 aa14.44□□□□□ -0.1
RPS28-204ENST00000602140 ARHGAP28Q9P2N2 729 aa14.44□□□□□ -0.1
RPS28-204ENST00000602140 CDY1Q9Y6F8 540 aa14.44□□□□□ -0.1
RPS28-204ENST00000602140 VWA8A3KMH1 1905 aa14.43□□□□□ -0.1
RPS28-204ENST00000602140 SFI1A8K8P3 1242 aa14.43□□□□□ -0.1
RPS28-204ENST00000602140 PRPHP41219 470 aa14.43□□□□□ -0.1
RPS28-204ENST00000602140 GPC5P78333 572 aa14.43□□□□□ -0.1
RPS28-204ENST00000602140 MAPK7Q13164 816 aa14.43□□□□□ -0.1
RPS28-204ENST00000602140 XKR4Q5GH76 650 aa14.43□□□□□ -0.1
RPS28-204ENST00000602140 SPECC1Q5M775 1068 aa14.43□□□□□ -0.1
RPS28-204ENST00000602140 PHLDB3Q6NSJ2 640 aa14.43□□□□□ -0.1
RPS28-204ENST00000602140 ALKAL1Q6UXT8 129 aa14.43□□□□□ -0.1
RPS28-204ENST00000602140 ANKS3Q6ZW76 656 aa14.43□□□□□ -0.1
RPS28-204ENST00000602140 C1orf186Q6ZWK4 172 aa14.43□□□□□ -0.1
RPS28-204ENST00000602140 KCNK18Q7Z418 384 aa14.43□□□□□ -0.1
RPS28-204ENST00000602140 DDX27Q96GQ7 796 aaKnown RBP14.43□□□□□ -0.1
RPS28-204ENST00000602140 TCHPQ9BT92 498 aa14.43□□□□□ -0.1
RPS28-204ENST00000602140 MMTAG2Q9BU76 263 aaKnown RBP14.43□□□□□ -0.1
RPS28-204ENST00000602140 SLC2A4RGQ9NR83 387 aa14.43□□□□□ -0.1
RPS28-204ENST00000602140 SLC38A7Q9NVC3 462 aa14.43□□□□□ -0.1
RPS28-204ENST00000602140 DNMT3BQ9UBC3 853 aaKnown RBP14.43□□□□□ -0.1
RPS28-204ENST00000602140 RBM19Q9Y4C8 960 aaKnown RBP14.43□□□□□ -0.1
RPS28-204ENST00000602140 BACE2Q9Y5Z0 518 aa14.43□□□□□ -0.1
RPS28-204ENST00000602140 SLC16A4O15374 487 aa14.42□□□□□ -0.1
RPS28-204ENST00000602140 DCNP07585 359 aaKnown RBP14.42□□□□□ -0.1
RPS28-204ENST00000602140 POU2F2P09086 479 aa14.42□□□□□ -0.1
RPS28-204ENST00000602140 ZRSR1Q15695 479 aaKnown RBP14.42□□□□□ -0.1
RPS28-204ENST00000602140 PABPC1LQ4VXU2 614 aaKnown RBP14.42□□□□□ -0.1
RPS28-204ENST00000602140 MCTP1Q6DN14 999 aa14.42□□□□□ -0.1
RPS28-204ENST00000602140 MTSS1LQ765P7 747 aa14.42□□□□□ -0.1
RPS28-204ENST00000602140 RTL10Q7L3V2 364 aa14.42□□□□□ -0.1
RPS28-204ENST00000602140 SNX27Q96L92 541 aa14.42□□□□□ -0.1
RPS28-204ENST00000602140 ZMAT2Q96NC0 199 aaKnown RBP14.42□□□□□ -0.1
RPS28-204ENST00000602140 ACAP3Q96P50 834 aa14.42□□□□□ -0.1
RPS28-204ENST00000602140 C17orf75Q9HAS0 396 aa14.42□□□□□ -0.1
RPS28-204ENST00000602140 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.42□□□□□ -0.1
RPS28-204ENST00000602140 SIT1Q9Y3P8 196 aa14.42□□□□□ -0.1
RPS28-204ENST00000602140 DOCK6Q96HP0 2047 aa14.41□□□□□ -0.1
RPS28-204ENST00000602140 PODXLO00592 558 aa14.41□□□□□ -0.1
RPS28-204ENST00000602140 ABLIM1O14639 778 aa14.41□□□□□ -0.1
RPS28-204ENST00000602140 MCF2P10911 925 aa14.41□□□□□ -0.1
RPS28-204ENST00000602140 HARSP12081 509 aaKnown RBP14.41□□□□□ -0.1
RPS28-204ENST00000602140 KCNE1P15382 129 aa14.41□□□□□ -0.1
RPS28-204ENST00000602140 PROZP22891 400 aa14.41□□□□□ -0.1
RPS28-204ENST00000602140 RAD51AP2Q09MP3 1159 aa14.41□□□□□ -0.1
RPS28-204ENST00000602140 C8orf34Q49A92 452 aa14.41□□□□□ -0.1
RPS28-204ENST00000602140 MPZL3Q6UWV2 235 aa14.41□□□□□ -0.1
RPS28-204ENST00000602140 ING5Q8WYH8 240 aa14.41□□□□□ -0.1
RPS28-204ENST00000602140 C18orf25Q96B23 403 aaPredicted RBP14.41□□□□□ -0.1
RPS28-204ENST00000602140 ZBTB45Q96K62 511 aaPredicted RBP14.41□□□□□ -0.1
RPS28-204ENST00000602140 TIPINQ9BVW5 301 aa14.41□□□□□ -0.1
RPS28-204ENST00000602140 FOXQ1Q9C009 403 aa14.41□□□□□ -0.1
RPS28-204ENST00000602140 KCNH3Q9ULD8 1083 aa14.41□□□□□ -0.1
RPS28-204ENST00000602140 KIF3AQ9Y496 699 aa14.41□□□□□ -0.1
RPS28-204ENST00000602140 TRIP11Q15643 1979 aa14.4□□□□□ -0.1
RPS28-204ENST00000602140 GUCY2CP25092 1073 aa14.4□□□□□ -0.1
RPS28-204ENST00000602140 STARD6P59095 220 aa14.4□□□□□ -0.1
RPS28-204ENST00000602140 ROR1Q01973 937 aa14.4□□□□□ -0.1
RPS28-204ENST00000602140 STRN3Q13033 797 aa14.4□□□□□ -0.1
RPS28-204ENST00000602140 SNW1Q13573 536 aaKnown RBP14.4□□□□□ -0.1
RPS28-204ENST00000602140 VARS2Q5ST30 1063 aaKnown RBP14.4□□□□□ -0.1
RPS28-204ENST00000602140 SLC8B1Q6J4K2 584 aa14.4□□□□□ -0.1
RPS28-204ENST00000602140 NPAS3Q8IXF0 933 aa14.4□□□□□ -0.1
RPS28-204ENST00000602140 ADSSL1Q8N142 457 aa14.4□□□□□ -0.1
RPS28-204ENST00000602140 ZNF461Q8TAF7 563 aa14.4□□□□□ -0.1
RPS28-204ENST00000602140 SHDQ96IW2 340 aa14.4□□□□□ -0.1
RPS28-204ENST00000602140 PNMA5Q96PV4 448 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms