RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 ARHGAP8P85298 464 aa18.51■□□□□ 0.55
USE1-208ENST00000600970 LMNB2Q03252 620 aa18.51■□□□□ 0.55
USE1-208ENST00000600970 TANGO2Q6ICL3 276 aa18.51■□□□□ 0.55
USE1-208ENST00000600970 GDE1Q9NZC3 331 aa18.51■□□□□ 0.55
USE1-208ENST00000600970 CDV3Q9UKY7 258 aaKnown RBP18.51■□□□□ 0.55
USE1-208ENST00000600970 USP20Q9Y2K6 914 aa18.51■□□□□ 0.55
USE1-208ENST00000600970 TRIP11Q15643 1979 aa18.5■□□□□ 0.55
USE1-208ENST00000600970 COL4A2P08572 1712 aa18.5■□□□□ 0.55
USE1-208ENST00000600970 EPB41L2O43491 1005 aaKnown RBP18.5■□□□□ 0.55
USE1-208ENST00000600970 EDN1P05305 212 aa18.5■□□□□ 0.55
USE1-208ENST00000600970 KRT2P35908 639 aa18.5■□□□□ 0.55
USE1-208ENST00000600970 ADCY1Q08828 1119 aa18.5■□□□□ 0.55
USE1-208ENST00000600970 MTAPQ13126 283 aa18.5■□□□□ 0.55
USE1-208ENST00000600970 PRPF4BQ13523 1007 aaKnown RBP18.5■□□□□ 0.55
USE1-208ENST00000600970 TMEM132AQ24JP5 1023 aa18.5■□□□□ 0.55
USE1-208ENST00000600970 CD300LGQ6UXG3 332 aa18.5■□□□□ 0.55
USE1-208ENST00000600970 MCPH1Q8NEM0 835 aa18.5■□□□□ 0.55
USE1-208ENST00000600970 ELSPBP1Q96BH3 223 aa18.5■□□□□ 0.55
USE1-208ENST00000600970 ADPGKQ9BRR6 497 aa18.5■□□□□ 0.55
USE1-208ENST00000600970 C2orf40Q9H1Z8 148 aa18.5■□□□□ 0.55
USE1-208ENST00000600970 AVENQ9NQS1 362 aaPredicted RBP18.5■□□□□ 0.55
USE1-208ENST00000600970 USP18Q9UMW8 372 aa18.5■□□□□ 0.55
USE1-208ENST00000600970 MRPS17Q9Y2R5 130 aaKnown RBP18.5■□□□□ 0.55
USE1-208ENST00000600970 GDAQ9Y2T3 454 aa18.5■□□□□ 0.55
USE1-208ENST00000600970 BACE2Q9Y5Z0 518 aa18.5■□□□□ 0.55
USE1-208ENST00000600970 CEP250Q9BV73 2442 aa18.49■□□□□ 0.55
USE1-208ENST00000600970 WNT7AO00755 349 aa18.49■□□□□ 0.55
USE1-208ENST00000600970 B3GAT3O94766 335 aa18.49■□□□□ 0.55
USE1-208ENST00000600970 CTDNEP1O95476 244 aa18.49■□□□□ 0.55
USE1-208ENST00000600970 PRKCBP05771 671 aa18.49■□□□□ 0.55
USE1-208ENST00000600970 SPATA31C1P0DKV0 1188 aa18.49■□□□□ 0.55
USE1-208ENST00000600970 CEBPBP17676 345 aa18.49■□□□□ 0.55
USE1-208ENST00000600970 ATP2B1P20020 1258 aa18.49■□□□□ 0.55
USE1-208ENST00000600970 TKTP29401 623 aaKnown RBP18.49■□□□□ 0.55
USE1-208ENST00000600970 RBM25P49756 843 aaKnown RBP18.49■□□□□ 0.55
USE1-208ENST00000600970 CLCNKBP51801 687 aa18.49■□□□□ 0.55
USE1-208ENST00000600970 MAPK6Q16659 721 aa18.49■□□□□ 0.55
USE1-208ENST00000600970 EEF1DP3Q658K8 133 aa18.49■□□□□ 0.55
USE1-208ENST00000600970 BSNDQ8WZ55 320 aa18.49■□□□□ 0.55
USE1-208ENST00000600970 DNASE1L2Q92874 299 aa18.49■□□□□ 0.55
USE1-208ENST00000600970 DDX27Q96GQ7 796 aaKnown RBP18.49■□□□□ 0.55
USE1-208ENST00000600970 MTMR9Q96QG7 549 aa18.49■□□□□ 0.55
USE1-208ENST00000600970 RTKNQ9BST9 563 aa18.49■□□□□ 0.55
USE1-208ENST00000600970 FAM126AQ9BYI3 521 aaPredicted RBP18.49■□□□□ 0.55
USE1-208ENST00000600970 CCDC113Q9H0I3 377 aa18.49■□□□□ 0.55
USE1-208ENST00000600970 PARD6AQ9NPB6 346 aa18.49■□□□□ 0.55
USE1-208ENST00000600970 ORC3Q9UBD5 711 aaPredicted RBP18.49■□□□□ 0.55
USE1-208ENST00000600970 DCDC2BA2VCK2 349 aa18.48■□□□□ 0.55
USE1-208ENST00000600970 I3L4J1 428 aa18.48■□□□□ 0.55
USE1-208ENST00000600970 ACKR2O00590 384 aa18.48■□□□□ 0.55
USE1-208ENST00000600970 NEMFO60524 1076 aa18.48■□□□□ 0.55
USE1-208ENST00000600970 PFKFB2O60825 505 aa18.48■□□□□ 0.55
USE1-208ENST00000600970 PTPN2P17706 415 aa18.48■□□□□ 0.55
USE1-208ENST00000600970 LIG1P18858 919 aa18.48■□□□□ 0.55
USE1-208ENST00000600970 FCARP24071 287 aa18.48■□□□□ 0.55
USE1-208ENST00000600970 UPP1Q16831 310 aa18.48■□□□□ 0.55
USE1-208ENST00000600970 GLRA4Q5JXX5 417 aa18.48■□□□□ 0.55
USE1-208ENST00000600970 ANKS3Q6ZW76 656 aa18.48■□□□□ 0.55
USE1-208ENST00000600970 ZNF687Q8N1G0 1237 aa18.48■□□□□ 0.55
USE1-208ENST00000600970 C3orf58Q8NDZ4 430 aa18.48■□□□□ 0.55
USE1-208ENST00000600970 PPP1R10Q96QC0 940 aaKnown RBP18.48■□□□□ 0.55
USE1-208ENST00000600970 GMEB2Q9UKD1 530 aa18.48■□□□□ 0.55
USE1-208ENST00000600970 TPCN1Q9ULQ1 816 aa18.48■□□□□ 0.55
USE1-208ENST00000600970 NDRG2Q9UN36 371 aaKnown RBP18.48■□□□□ 0.55
USE1-208ENST00000600970 TICRRQ7Z2Z1 1910 aa18.47■□□□□ 0.55
USE1-208ENST00000600970 ARHGEF37A1IGU5 675 aa18.47■□□□□ 0.55
USE1-208ENST00000600970 TDGF1P13385 188 aa18.47■□□□□ 0.55
USE1-208ENST00000600970 BRCC3P46736 316 aa18.47■□□□□ 0.55
USE1-208ENST00000600970 GRM2Q14416 872 aa18.47■□□□□ 0.55
USE1-208ENST00000600970 PRSS36Q5K4E3 855 aa18.47■□□□□ 0.55
USE1-208ENST00000600970 CATSPER3Q86XQ3 398 aa18.47■□□□□ 0.55
USE1-208ENST00000600970 WASF1Q92558 559 aa18.47■□□□□ 0.55
USE1-208ENST00000600970 UROC1Q96N76 676 aa18.47■□□□□ 0.55
USE1-208ENST00000600970 CHRDQ9H2X0 955 aa18.47■□□□□ 0.55
USE1-208ENST00000600970 GOLGA2P5Q9HBQ8 144 aa18.47■□□□□ 0.55
USE1-208ENST00000600970 BRMS1Q9HCU9 246 aa18.47■□□□□ 0.55
USE1-208ENST00000600970 TUFT1Q9NNX1 390 aa18.47■□□□□ 0.55
USE1-208ENST00000600970 GPR179Q6PRD1 2367 aa18.47■□□□□ 0.55
USE1-208ENST00000600970 NRG2O14511 850 aaPredicted RBP18.46■□□□□ 0.55
USE1-208ENST00000600970 TRAPPC3O43617 180 aa18.46■□□□□ 0.55
USE1-208ENST00000600970 MED24O75448 989 aa18.46■□□□□ 0.55
USE1-208ENST00000600970 LRG1P02750 347 aa18.46■□□□□ 0.55
USE1-208ENST00000600970 FDPSP14324 419 aaKnown RBP18.46■□□□□ 0.55
USE1-208ENST00000600970 NAMPTP43490 491 aa18.46■□□□□ 0.55
USE1-208ENST00000600970 ROR1Q01973 937 aa18.46■□□□□ 0.55
USE1-208ENST00000600970 DCAF4L1Q3SXM0 396 aa18.46■□□□□ 0.55
USE1-208ENST00000600970 SLC8B1Q6J4K2 584 aa18.46■□□□□ 0.55
USE1-208ENST00000600970 ZNF461Q8TAF7 563 aa18.46■□□□□ 0.55
USE1-208ENST00000600970 TCEAL4Q96EI5 215 aa18.46■□□□□ 0.55
USE1-208ENST00000600970 BRD9Q9H8M2 597 aa18.46■□□□□ 0.55
USE1-208ENST00000600970 ZFP14Q9HCL3 533 aa18.46■□□□□ 0.55
USE1-208ENST00000600970 WDR27A2RRH5 827 aa18.45■□□□□ 0.54
USE1-208ENST00000600970 MAN2B1O00754 1011 aa18.45■□□□□ 0.54
USE1-208ENST00000600970 ABLIM3O94929 683 aa18.45■□□□□ 0.54
USE1-208ENST00000600970 ELF1P32519 619 aa18.45■□□□□ 0.54
USE1-208ENST00000600970 NRLP54845 237 aa18.45■□□□□ 0.54
USE1-208ENST00000600970 SPEM2Q0P670 501 aa18.45■□□□□ 0.54
USE1-208ENST00000600970 LPAL2Q16609 132 aa18.45■□□□□ 0.54
USE1-208ENST00000600970 FAM78AQ5JUQ0 283 aa18.45■□□□□ 0.54
USE1-208ENST00000600970 MAMSTRQ6ZN01 415 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms