RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 TOPORSQ9NS56 1045 aaPredicted RBP17.2■□□□□ 0.34
RPS28-203ENST00000600659 CPSF3Q9UKF6 684 aaKnown RBP17.2■□□□□ 0.34
RPS28-203ENST00000600659 BARX2Q9UMQ3 279 aaPredicted RBP17.2■□□□□ 0.34
RPS28-203ENST00000600659 C2orf16Q68DN1 1984 aa17.19■□□□□ 0.34
RPS28-203ENST00000600659 SCN1AP35498 2009 aa17.19■□□□□ 0.34
RPS28-203ENST00000600659 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.19■□□□□ 0.34
RPS28-203ENST00000600659 PRPF6O94906 941 aaKnown RBP17.19■□□□□ 0.34
RPS28-203ENST00000600659 GCNT3O95395 438 aa17.19■□□□□ 0.34
RPS28-203ENST00000600659 CXCL14O95715 111 aa17.19■□□□□ 0.34
RPS28-203ENST00000600659 CLCNKBP51801 687 aa17.19■□□□□ 0.34
RPS28-203ENST00000600659 YARSP54577 528 aaKnown RBP17.19■□□□□ 0.34
RPS28-203ENST00000600659 UPP1Q16831 310 aa17.19■□□□□ 0.34
RPS28-203ENST00000600659 CRELD2Q6UXH1 353 aaPredicted RBP17.19■□□□□ 0.34
RPS28-203ENST00000600659 UNC13DQ70J99 1090 aa17.19■□□□□ 0.34
RPS28-203ENST00000600659 HASPINQ8TF76 798 aa17.19■□□□□ 0.34
RPS28-203ENST00000600659 C18orf25Q96B23 403 aaPredicted RBP17.19■□□□□ 0.34
RPS28-203ENST00000600659 PAGE5Q96GU1 130 aa17.19■□□□□ 0.34
RPS28-203ENST00000600659 B3GALT6Q96L58 329 aa17.19■□□□□ 0.34
RPS28-203ENST00000600659 LRRC27Q9C0I9 530 aa17.19■□□□□ 0.34
RPS28-203ENST00000600659 HCFC2Q9Y5Z7 792 aa17.19■□□□□ 0.34
RPS28-203ENST00000600659 CLTAP09496 248 aa17.18■□□□□ 0.34
RPS28-203ENST00000600659 IL9P15248 144 aa17.18■□□□□ 0.34
RPS28-203ENST00000600659 AFMP43652 599 aa17.18■□□□□ 0.34
RPS28-203ENST00000600659 TSC2P49815 1807 aa17.18■□□□□ 0.34
RPS28-203ENST00000600659 AMPD3Q01432 767 aa17.18■□□□□ 0.34
RPS28-203ENST00000600659 DSG1Q02413 1049 aa17.18■□□□□ 0.34
RPS28-203ENST00000600659 ZBTB6Q15916 424 aa17.18■□□□□ 0.34
RPS28-203ENST00000600659 AAK1Q2M2I8 961 aa17.18■□□□□ 0.34
RPS28-203ENST00000600659 DENND4AQ7Z401 1863 aa17.18■□□□□ 0.34
RPS28-203ENST00000600659 SLC22A17Q8WUG5 538 aa17.18■□□□□ 0.34
RPS28-203ENST00000600659 KLHL5Q96PQ7 755 aa17.18■□□□□ 0.34
RPS28-203ENST00000600659 ACCSQ96QU6 501 aa17.18■□□□□ 0.34
RPS28-203ENST00000600659 PYM1Q9BRP8 204 aaKnown RBP17.18■□□□□ 0.34
RPS28-203ENST00000600659 MSTO1Q9BUK6 570 aa17.18■□□□□ 0.34
RPS28-203ENST00000600659 PLEKHA5Q9HAU0 1116 aa17.18■□□□□ 0.34
RPS28-203ENST00000600659 STK39Q9UEW8 545 aa17.18■□□□□ 0.34
RPS28-203ENST00000600659 TUBGCP4Q9UGJ1 667 aa17.18■□□□□ 0.34
RPS28-203ENST00000600659 GRXCR2A6NFK2 248 aa17.17■□□□□ 0.34
RPS28-203ENST00000600659 NR1I2O75469 434 aa17.17■□□□□ 0.34
RPS28-203ENST00000600659 CNPP09543 421 aaKnown RBP17.17■□□□□ 0.34
RPS28-203ENST00000600659 MATR3P43243 847 aaKnown RBP eCLIP17.17■□□□□ 0.34
RPS28-203ENST00000600659 NDUFV1P49821 464 aa17.17■□□□□ 0.34
RPS28-203ENST00000600659 SPAG1Q07617 926 aa17.17■□□□□ 0.34
RPS28-203ENST00000600659 ALCAMQ13740 583 aa17.17■□□□□ 0.34
RPS28-203ENST00000600659 CLUL1Q15846 466 aa17.17■□□□□ 0.34
RPS28-203ENST00000600659 RTP2Q5QGT7 225 aa17.17■□□□□ 0.34
RPS28-203ENST00000600659 FAM26FQ5R3K3 315 aa17.17■□□□□ 0.34
RPS28-203ENST00000600659 SYCE2Q6PIF2 218 aa17.17■□□□□ 0.34
RPS28-203ENST00000600659 EP400NLQ6ZTU2 488 aa17.17■□□□□ 0.34
RPS28-203ENST00000600659 FSIP1Q8NA03 581 aa17.17■□□□□ 0.34
RPS28-203ENST00000600659 SMRP1Q8NCR6 262 aa17.17■□□□□ 0.34
RPS28-203ENST00000600659 FEZF2Q8TBJ5 459 aa17.17■□□□□ 0.34
RPS28-203ENST00000600659 NECAB3Q96P71 396 aaPredicted RBP17.17■□□□□ 0.34
RPS28-203ENST00000600659 RXFP1Q9HBX9 757 aa17.17■□□□□ 0.34
RPS28-203ENST00000600659 PCDHB13Q9Y5F0 798 aa17.17■□□□□ 0.34
RPS28-203ENST00000600659 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.16■□□□□ 0.34
RPS28-203ENST00000600659 PVALEFA0A1B0GWK0 134 aa17.16■□□□□ 0.34
RPS28-203ENST00000600659 LACTBL1A8MY62 500 aa17.16■□□□□ 0.34
RPS28-203ENST00000600659 EIF3DO15371 548 aaKnown RBP eCLIP17.16■□□□□ 0.34
RPS28-203ENST00000600659 MBTPS2O43462 519 aa17.16■□□□□ 0.34
RPS28-203ENST00000600659 PRR29P0C7W0 189 aa17.16■□□□□ 0.34
RPS28-203ENST00000600659 EPCAMP16422 314 aa17.16■□□□□ 0.34
RPS28-203ENST00000600659 SYKP43405 635 aa17.16■□□□□ 0.34
RPS28-203ENST00000600659 GLUD2P49448 558 aa17.16■□□□□ 0.34
RPS28-203ENST00000600659 ACOT2P49753 483 aa17.16■□□□□ 0.34
RPS28-203ENST00000600659 WNT7BP56706 349 aa17.16■□□□□ 0.34
RPS28-203ENST00000600659 KYAT1Q16773 422 aa17.16■□□□□ 0.34
RPS28-203ENST00000600659 PTCRAQ6ISU1 281 aaPredicted RBP17.16■□□□□ 0.34
RPS28-203ENST00000600659 CEP57L1Q8IYX8 460 aa17.16■□□□□ 0.34
RPS28-203ENST00000600659 ZNF507Q8TCN5 953 aa17.16■□□□□ 0.34
RPS28-203ENST00000600659 ADAMTS19Q8TE59 1207 aa17.16■□□□□ 0.34
RPS28-203ENST00000600659 SCFD1Q8WVM8 642 aa17.16■□□□□ 0.34
RPS28-203ENST00000600659 UROC1Q96N76 676 aa17.16■□□□□ 0.34
RPS28-203ENST00000600659 CBWD1Q9BRT8 395 aa17.16■□□□□ 0.34
RPS28-203ENST00000600659 USP25Q9UHP3 1055 aa17.16■□□□□ 0.34
RPS28-203ENST00000600659 AGO2Q9UKV8 859 aaKnown RBP17.16■□□□□ 0.34
RPS28-203ENST00000600659 CIZ1Q9ULV3 898 aaPredicted RBP17.16■□□□□ 0.34
RPS28-203ENST00000600659 SF3B1O75533 1304 aaKnown RBP eCLIP17.15■□□□□ 0.34
RPS28-203ENST00000600659 FSD2A1L4K1 749 aa17.15■□□□□ 0.34
RPS28-203ENST00000600659 PODXLO00592 558 aa17.15■□□□□ 0.34
RPS28-203ENST00000600659 C2CD2LO14523 706 aa17.15■□□□□ 0.34
RPS28-203ENST00000600659 TEX28O15482 410 aa17.15■□□□□ 0.34
RPS28-203ENST00000600659 TADA2AO75478 443 aa17.15■□□□□ 0.34
RPS28-203ENST00000600659 URODP06132 367 aa17.15■□□□□ 0.34
RPS28-203ENST00000600659 CLCN4P51793 760 aa17.15■□□□□ 0.34
RPS28-203ENST00000600659 BMT2Q1RMZ1 405 aa17.15■□□□□ 0.34
RPS28-203ENST00000600659 USP41Q3LFD5 358 aa17.15■□□□□ 0.34
RPS28-203ENST00000600659 SLFN12LQ6IEE8 588 aa17.15■□□□□ 0.34
RPS28-203ENST00000600659 ANKRD54Q6NXT1 300 aa17.15■□□□□ 0.34
RPS28-203ENST00000600659 LLGL2Q6P1M3 1020 aa17.15■□□□□ 0.34
RPS28-203ENST00000600659 DCLRE1AQ6PJP8 1040 aa17.15■□□□□ 0.34
RPS28-203ENST00000600659 GPR65Q8IYL9 337 aa17.15■□□□□ 0.34
RPS28-203ENST00000600659 KIAA0895Q8NCT3 520 aa17.15■□□□□ 0.34
RPS28-203ENST00000600659 S1PR5Q9H228 398 aa17.15■□□□□ 0.34
RPS28-203ENST00000600659 MRPL17Q9NRX2 175 aaKnown RBP17.15■□□□□ 0.34
RPS28-203ENST00000600659 SLC38A7Q9NVC3 462 aa17.15■□□□□ 0.34
RPS28-203ENST00000600659 CD207Q9UJ71 328 aa17.15■□□□□ 0.34
RPS28-203ENST00000600659 EXOC7Q9UPT5 735 aa17.15■□□□□ 0.34
RPS28-203ENST00000600659 DOCK6Q96HP0 2047 aa17.14■□□□□ 0.33
RPS28-203ENST00000600659 TGFB1I1O43294 461 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms