RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 MMP19Q99542 508 aa23.18■■□□□ 1.3
GRAMD1A-212ENST00000600231 NEUROG2Q9H2A3 272 aa23.18■■□□□ 1.3
GRAMD1A-212ENST00000600231 UVRAGQ9P2Y5 699 aa23.18■■□□□ 1.3
GRAMD1A-212ENST00000600231 CNOT8Q9UFF9 292 aaKnown RBP23.18■■□□□ 1.3
GRAMD1A-212ENST00000600231 DAPK3O43293 454 aa23.18■■□□□ 1.3
GRAMD1A-212ENST00000600231 MSCO60682 206 aa23.18■■□□□ 1.3
GRAMD1A-212ENST00000600231 SRGAP2CP0DJJ0 459 aa23.18■■□□□ 1.3
GRAMD1A-212ENST00000600231 YBX3P16989 372 aaKnown RBP eCLIP23.18■■□□□ 1.34e-6■□□□□ 8.3
GRAMD1A-212ENST00000600231 CAPN2P17655 700 aa23.18■■□□□ 1.3
GRAMD1A-212ENST00000600231 TMEM63BQ5T3F8 832 aa23.18■■□□□ 1.3
GRAMD1A-212ENST00000600231 CFAP58Q5T655 872 aa23.18■■□□□ 1.3
GRAMD1A-212ENST00000600231 SCARA3Q6AZY7 606 aa23.18■■□□□ 1.3
GRAMD1A-212ENST00000600231 LRRC71Q8N4P6 559 aa23.18■■□□□ 1.3
GRAMD1A-212ENST00000600231 MPHOSPH6Q99547 160 aaKnown RBP23.18■■□□□ 1.3
GRAMD1A-212ENST00000600231 GOLGA6CA6NDK9 693 aa23.17■■□□□ 1.3
GRAMD1A-212ENST00000600231 ZBTB42B2RXF5 422 aa23.17■■□□□ 1.3
GRAMD1A-212ENST00000600231 OPA1O60313 960 aa23.17■■□□□ 1.3
GRAMD1A-212ENST00000600231 GOLGA6DP0CG33 693 aa23.17■■□□□ 1.3
GRAMD1A-212ENST00000600231 PIK3R5Q8WYR1 880 aa23.17■■□□□ 1.3
GRAMD1A-212ENST00000600231 COPS5Q92905 334 aa23.17■■□□□ 1.3
GRAMD1A-212ENST00000600231 CGRRF1Q99675 332 aa23.17■■□□□ 1.3
GRAMD1A-212ENST00000600231 GOLGA6AQ9NYA3 693 aa23.17■■□□□ 1.3
GRAMD1A-212ENST00000600231 ACO1P21399 889 aaKnown RBP23.17■■□□□ 1.3
GRAMD1A-212ENST00000600231 TNFSF9P41273 254 aa23.17■■□□□ 1.3
GRAMD1A-212ENST00000600231 IER5Q5VY09 327 aa23.17■■□□□ 1.3
GRAMD1A-212ENST00000600231 ZPBP2Q6X784 338 aa23.17■■□□□ 1.3
GRAMD1A-212ENST00000600231 MORC4Q8TE76 937 aa23.17■■□□□ 1.3
GRAMD1A-212ENST00000600231 CPA5Q8WXQ8 436 aa23.17■■□□□ 1.3
GRAMD1A-212ENST00000600231 ARL8AQ96BM9 186 aa23.17■■□□□ 1.3
GRAMD1A-212ENST00000600231 WNT8AQ9H1J5 351 aa23.17■■□□□ 1.3
GRAMD1A-212ENST00000600231 SPOPO43791 374 aa23.16■■□□□ 1.3
GRAMD1A-212ENST00000600231 LGR5O75473 907 aa23.16■■□□□ 1.3
GRAMD1A-212ENST00000600231 KRT14P02533 472 aa23.16■■□□□ 1.3
GRAMD1A-212ENST00000600231 LAMTOR4Q0VGL1 99 aa23.16■■□□□ 1.3
GRAMD1A-212ENST00000600231 CUL2Q13617 745 aa23.16■■□□□ 1.3
GRAMD1A-212ENST00000600231 GPAT2Q6NUI2 795 aa23.16■■□□□ 1.3
GRAMD1A-212ENST00000600231 KCNV1Q6PIU1 500 aa23.16■■□□□ 1.3
GRAMD1A-212ENST00000600231 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.16■■□□□ 1.3
GRAMD1A-212ENST00000600231 ZBTB33Q86T24 672 aa23.16■■□□□ 1.3
GRAMD1A-212ENST00000600231 RNF149Q8NC42 400 aa23.16■■□□□ 1.3
GRAMD1A-212ENST00000600231 SPATA33Q96N06 139 aa23.16■■□□□ 1.3
GRAMD1A-212ENST00000600231 TCHPQ9BT92 498 aa23.16■■□□□ 1.3
GRAMD1A-212ENST00000600231 GOLGA6L10A0A0M3HER8 536 aa23.16■■□□□ 1.3
GRAMD1A-212ENST00000600231 EFNA5P52803 228 aa23.16■■□□□ 1.3
GRAMD1A-212ENST00000600231 CCDC62Q6P9F0 684 aa23.16■■□□□ 1.3
GRAMD1A-212ENST00000600231 DHX37Q8IY37 1157 aaKnown RBP23.16■■□□□ 1.3
GRAMD1A-212ENST00000600231 ATP8B4Q8TF62 1192 aa23.16■■□□□ 1.3
GRAMD1A-212ENST00000600231 SEC14L1Q92503 715 aa23.16■■□□□ 1.3
GRAMD1A-212ENST00000600231 TRIM51Q9BSJ1 452 aa23.16■■□□□ 1.3
GRAMD1A-212ENST00000600231 PYGMP11217 842 aa23.15■■□□□ 1.3
GRAMD1A-212ENST00000600231 OSBPP22059 807 aa23.15■■□□□ 1.3
GRAMD1A-212ENST00000600231 HSPA9P38646 679 aaKnown RBP23.15■■□□□ 1.3
GRAMD1A-212ENST00000600231 FASTKD5Q7L8L6 764 aaKnown RBP23.15■■□□□ 1.3
GRAMD1A-212ENST00000600231 MCOLN2Q8IZK6 566 aa23.15■■□□□ 1.3
GRAMD1A-212ENST00000600231 ZDHHC14Q8IZN3 488 aa23.15■■□□□ 1.3
GRAMD1A-212ENST00000600231 CCDC113Q9H0I3 377 aa23.15■■□□□ 1.3
GRAMD1A-212ENST00000600231 UTP11Q9Y3A2 253 aaKnown RBP23.15■■□□□ 1.3
GRAMD1A-212ENST00000600231 NUB1Q9Y5A7 615 aa23.15■■□□□ 1.3
GRAMD1A-212ENST00000600231 UMODL1Q5DID0 1318 aa23.15■■□□□ 1.3
GRAMD1A-212ENST00000600231 GOLGA8KD6RF30 607 aa23.15■■□□□ 1.3
GRAMD1A-212ENST00000600231 FAM189A1O60320 539 aa23.15■■□□□ 1.3
GRAMD1A-212ENST00000600231 TOM1L1O75674 476 aa23.15■■□□□ 1.3
GRAMD1A-212ENST00000600231 CLSTN1O94985 981 aa23.15■■□□□ 1.3
GRAMD1A-212ENST00000600231 EPHX2P34913 555 aa23.15■■□□□ 1.3
GRAMD1A-212ENST00000600231 BPIFB4P59827 614 aa23.15■■□□□ 1.3
GRAMD1A-212ENST00000600231 PLCB4Q15147 1175 aa23.15■■□□□ 1.3
GRAMD1A-212ENST00000600231 C2CD6Q53TS8 623 aa23.15■■□□□ 1.3
GRAMD1A-212ENST00000600231 TMEM270Q6UE05 265 aa23.15■■□□□ 1.3
GRAMD1A-212ENST00000600231 USP50Q70EL3 339 aaPredicted RBP23.15■■□□□ 1.3
GRAMD1A-212ENST00000600231 PLPPR4Q7Z2D5 763 aa23.15■■□□□ 1.3
GRAMD1A-212ENST00000600231 ZNF677Q86XU0 584 aa23.15■■□□□ 1.3
GRAMD1A-212ENST00000600231 FAM76AQ8TAV0 307 aa23.15■■□□□ 1.3
GRAMD1A-212ENST00000600231 TRAPPC12Q8WVT3 735 aa23.15■■□□□ 1.3
GRAMD1A-212ENST00000600231 MRPL4Q9BYD3 311 aaKnown RBP23.15■■□□□ 1.3
GRAMD1A-212ENST00000600231 DPH5Q9H2P9 285 aa23.15■■□□□ 1.3
GRAMD1A-212ENST00000600231 CTNNA1P35221 906 aaKnown RBP23.14■■□□□ 1.3
GRAMD1A-212ENST00000600231 NOP14P78316 857 aaKnown RBP23.14■■□□□ 1.3
GRAMD1A-212ENST00000600231 PPFIA1Q13136 1202 aa23.14■■□□□ 1.3
GRAMD1A-212ENST00000600231 CLUL1Q15846 466 aa23.14■■□□□ 1.3
GRAMD1A-212ENST00000600231 PPP2R5EQ16537 467 aa23.14■■□□□ 1.3
GRAMD1A-212ENST00000600231 TTMPQ5BVD1 217 aa23.14■■□□□ 1.3
GRAMD1A-212ENST00000600231 PHLDB2Q86SQ0 1253 aa23.14■■□□□ 1.3
GRAMD1A-212ENST00000600231 CYFIP2Q96F07 1278 aa23.14■■□□□ 1.3
GRAMD1A-212ENST00000600231 SYT17Q9BSW7 474 aa23.14■■□□□ 1.3
GRAMD1A-212ENST00000600231 TRIM31Q9BZY9 425 aa23.14■■□□□ 1.3
GRAMD1A-212ENST00000600231 PDGFCQ9NRA1 345 aa23.14■■□□□ 1.3
GRAMD1A-212ENST00000600231 PPME1Q9Y570 386 aa23.14■■□□□ 1.3
GRAMD1A-212ENST00000600231 PCDHB4Q9Y5E5 795 aa23.14■■□□□ 1.3
GRAMD1A-212ENST00000600231 PCDHA3Q9Y5H8 950 aa23.14■■□□□ 1.3
GRAMD1A-212ENST00000600231 IGKV6-21A0A0C4DH24 114 aa23.14■■□□□ 1.29
GRAMD1A-212ENST00000600231 CFHP08603 1231 aa23.14■■□□□ 1.29
GRAMD1A-212ENST00000600231 CLTAP09496 248 aa23.14■■□□□ 1.29
GRAMD1A-212ENST00000600231 FLT3P36888 993 aa23.14■■□□□ 1.29
GRAMD1A-212ENST00000600231 DR1Q01658 176 aa23.14■■□□□ 1.29
GRAMD1A-212ENST00000600231 NCOA4Q13772 614 aa23.14■■□□□ 1.29
GRAMD1A-212ENST00000600231 MXD4Q14582 209 aaPredicted RBP23.14■■□□□ 1.29
GRAMD1A-212ENST00000600231 CDCA2Q69YH5 1023 aaPredicted RBP23.14■■□□□ 1.29
GRAMD1A-212ENST00000600231 DPY19L2Q6NUT2 758 aa23.14■■□□□ 1.29
GRAMD1A-212ENST00000600231 BRSK2Q8IWQ3 736 aa23.14■■□□□ 1.29
GRAMD1A-212ENST00000600231 ZC3H15Q8WU90 426 aaKnown RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms