RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 HINFPQ9BQA5 517 aa18.9■□□□□ 0.62
SMG9-210ENST00000600097 TOPORSQ9NS56 1045 aaPredicted RBP18.9■□□□□ 0.62
SMG9-210ENST00000600097 GDE1Q9NZC3 331 aa18.9■□□□□ 0.62
SMG9-210ENST00000600097 DNMT3BQ9UBC3 853 aaKnown RBP18.9■□□□□ 0.62
SMG9-210ENST00000600097 FBXO4Q9UKT5 387 aa18.9■□□□□ 0.62
SMG9-210ENST00000600097 MRPS23Q9Y3D9 190 aaKnown RBP18.9■□□□□ 0.62
SMG9-210ENST00000600097 DCHS1Q96JQ0 3298 aa18.9■□□□□ 0.62
SMG9-210ENST00000600097 K7ERI5 159 aa18.89■□□□□ 0.61
SMG9-210ENST00000600097 LAMTOR5O43504 91 aa18.89■□□□□ 0.61
SMG9-210ENST00000600097 KINO60870 393 aaKnown RBP18.89■□□□□ 0.61
SMG9-210ENST00000600097 LRRN2O75325 713 aa18.89■□□□□ 0.61
SMG9-210ENST00000600097 YARSP54577 528 aaKnown RBP18.89■□□□□ 0.61
SMG9-210ENST00000600097 UBXN2BQ14CS0 331 aa18.89■□□□□ 0.61
SMG9-210ENST00000600097 ZNF174Q15697 407 aa18.89■□□□□ 0.61
SMG9-210ENST00000600097 NT5DC1Q5TFE4 455 aa18.89■□□□□ 0.61
SMG9-210ENST00000600097 KIAA2013Q8IYS2 634 aa18.89■□□□□ 0.61
SMG9-210ENST00000600097 DDX27Q96GQ7 796 aaKnown RBP18.89■□□□□ 0.61
SMG9-210ENST00000600097 NELL2Q99435 816 aa18.89■□□□□ 0.61
SMG9-210ENST00000600097 KXD1Q9BQD3 176 aa18.89■□□□□ 0.61
SMG9-210ENST00000600097 KIFC3Q9BVG8 833 aa18.89■□□□□ 0.61
SMG9-210ENST00000600097 FOXP1Q9H334 677 aaPredicted RBP18.89■□□□□ 0.61
SMG9-210ENST00000600097 SPATA6Q9NWH7 488 aaPredicted RBP18.89■□□□□ 0.61
SMG9-210ENST00000600097 HCFC1R1Q9NWW0 138 aa18.89■□□□□ 0.61
SMG9-210ENST00000600097 TNFSF13BQ9Y275 285 aa18.89■□□□□ 0.61
SMG9-210ENST00000600097 DOCK6Q96HP0 2047 aa18.88■□□□□ 0.61
SMG9-210ENST00000600097 CACNA1AO00555 2505 aa18.88■□□□□ 0.61
SMG9-210ENST00000600097 SMIM28A0A1B0GU29 152 aa18.88■□□□□ 0.61
SMG9-210ENST00000600097 FAM170BA6NMN3 283 aa18.88■□□□□ 0.61
SMG9-210ENST00000600097 EIF5BO60841 1220 aaKnown RBP18.88■□□□□ 0.61
SMG9-210ENST00000600097 ECI2O75521 394 aa18.88■□□□□ 0.61
SMG9-210ENST00000600097 TKTP29401 623 aaKnown RBP18.88■□□□□ 0.61
SMG9-210ENST00000600097 CCT6AP40227 531 aaKnown RBP18.88■□□□□ 0.61
SMG9-210ENST00000600097 GUCY1B3Q02153 619 aa18.88■□□□□ 0.61
SMG9-210ENST00000600097 MAML2Q8IZL2 1156 aaPredicted RBP18.88■□□□□ 0.61
SMG9-210ENST00000600097 ZNF461Q8TAF7 563 aa18.88■□□□□ 0.61
SMG9-210ENST00000600097 RMDN1Q96DB5 314 aa18.88■□□□□ 0.61
SMG9-210ENST00000600097 C8orf76Q96K31 380 aa18.88■□□□□ 0.61
SMG9-210ENST00000600097 CCDC94Q9BW85 323 aaPredicted RBP18.88■□□□□ 0.61
SMG9-210ENST00000600097 BHMT2Q9H2M3 363 aa18.88■□□□□ 0.61
SMG9-210ENST00000600097 LTB4R2Q9NPC1 389 aa18.88■□□□□ 0.61
SMG9-210ENST00000600097 AVENQ9NQS1 362 aaPredicted RBP18.88■□□□□ 0.61
SMG9-210ENST00000600097 SLC38A7Q9NVC3 462 aa18.88■□□□□ 0.61
SMG9-210ENST00000600097 SPTLC1O15269 473 aa18.87■□□□□ 0.61
SMG9-210ENST00000600097 NCAM2O15394 837 aa18.87■□□□□ 0.61
SMG9-210ENST00000600097 RHOP08100 348 aa18.87■□□□□ 0.61
SMG9-210ENST00000600097 ELF1P32519 619 aa18.87■□□□□ 0.61
SMG9-210ENST00000600097 GRM5P41594 1212 aa18.87■□□□□ 0.61
SMG9-210ENST00000600097 FXR2P51116 673 aaKnown RBP eCLIP18.87■□□□□ 0.61
SMG9-210ENST00000600097 ZBTB41Q5SVQ8 909 aa18.87■□□□□ 0.61
SMG9-210ENST00000600097 SLC8B1Q6J4K2 584 aa18.87■□□□□ 0.61
SMG9-210ENST00000600097 CD300LGQ6UXG3 332 aa18.87■□□□□ 0.61
SMG9-210ENST00000600097 PHLPP2Q6ZVD8 1323 aa18.87■□□□□ 0.61
SMG9-210ENST00000600097 CACNA1IQ9P0X4 2223 aa18.87■□□□□ 0.61
SMG9-210ENST00000600097 STK24Q9Y6E0 443 aa18.87■□□□□ 0.61
SMG9-210ENST00000600097 OTOGLQ3ZCN5 2332 aa18.86■□□□□ 0.61
SMG9-210ENST00000600097 MYH15Q9Y2K3 1946 aa18.86■□□□□ 0.61
SMG9-210ENST00000600097 ARHGEF37A1IGU5 675 aa18.86■□□□□ 0.61
SMG9-210ENST00000600097 LRG1P02750 347 aa18.86■□□□□ 0.61
SMG9-210ENST00000600097 PTPN2P17706 415 aa18.86■□□□□ 0.61
SMG9-210ENST00000600097 IGFBP6P24592 240 aaPredicted RBP18.86■□□□□ 0.61
SMG9-210ENST00000600097 BRCC3P46736 316 aa18.86■□□□□ 0.61
SMG9-210ENST00000600097 TRAPPC10P48553 1259 aa18.86■□□□□ 0.61
SMG9-210ENST00000600097 PUM1Q14671 1186 aaKnown RBP eCLIP18.86■□□□□ 0.61
SMG9-210ENST00000600097 XKR4Q5GH76 650 aa18.86■□□□□ 0.61
SMG9-210ENST00000600097 TTC38Q5R3I4 469 aa18.86■□□□□ 0.61
SMG9-210ENST00000600097 SUMF1Q8NBK3 374 aa18.86■□□□□ 0.61
SMG9-210ENST00000600097 C3orf58Q8NDZ4 430 aa18.86■□□□□ 0.61
SMG9-210ENST00000600097 ING5Q8WYH8 240 aa18.86■□□□□ 0.61
SMG9-210ENST00000600097 GOLGA2P5Q9HBQ8 144 aa18.86■□□□□ 0.61
SMG9-210ENST00000600097 POLD4Q9HCU8 107 aa18.86■□□□□ 0.61
SMG9-210ENST00000600097 LRWD1Q9UFC0 647 aa18.86■□□□□ 0.61
SMG9-210ENST00000600097 KIAA1024Q9UPX6 916 aa18.86■□□□□ 0.61
SMG9-210ENST00000600097 MRPS17Q9Y2R5 130 aaKnown RBP18.86■□□□□ 0.61
SMG9-210ENST00000600097 MTF2Q9Y483 593 aaPredicted RBP18.86■□□□□ 0.61
SMG9-210ENST00000600097 PCDHGA2Q9Y5H1 932 aa18.86■□□□□ 0.61
SMG9-210ENST00000600097 VWA8A3KMH1 1905 aa18.86■□□□□ 0.61
SMG9-210ENST00000600097 I3L4J1 428 aa18.85■□□□□ 0.61
SMG9-210ENST00000600097 PRRG1O14668 218 aa18.85■□□□□ 0.61
SMG9-210ENST00000600097 SYN3O14994 580 aa18.85■□□□□ 0.61
SMG9-210ENST00000600097 ABLIM3O94929 683 aa18.85■□□□□ 0.61
SMG9-210ENST00000600097 ROR1Q01973 937 aa18.85■□□□□ 0.61
SMG9-210ENST00000600097 ST3GAL1Q11201 340 aa18.85■□□□□ 0.61
SMG9-210ENST00000600097 PDIA5Q14554 519 aa18.85■□□□□ 0.61
SMG9-210ENST00000600097 ECM1Q16610 540 aa18.85■□□□□ 0.61
SMG9-210ENST00000600097 ZNF568Q3ZCX4 644 aa18.85■□□□□ 0.61
SMG9-210ENST00000600097 ALKAL1Q6UXT8 129 aa18.85■□□□□ 0.61
SMG9-210ENST00000600097 TPRG1Q6ZUI0 275 aa18.85■□□□□ 0.61
SMG9-210ENST00000600097 DGLUCYQ7Z3D6 616 aa18.85■□□□□ 0.61
SMG9-210ENST00000600097 CLDN23Q96B33 292 aa18.85■□□□□ 0.61
SMG9-210ENST00000600097 MCRS1Q96EZ8 462 aa18.85■□□□□ 0.61
SMG9-210ENST00000600097 ACO2Q99798 780 aaKnown RBP18.85■□□□□ 0.61
SMG9-210ENST00000600097 LLPHQ9BRT6 129 aaKnown RBP18.85■□□□□ 0.61
SMG9-210ENST00000600097 MRPL4Q9BYD3 311 aaKnown RBP18.85■□□□□ 0.61
SMG9-210ENST00000600097 RAB34Q9BZG1 259 aa18.85■□□□□ 0.61
SMG9-210ENST00000600097 CDT1Q9H211 546 aa18.85■□□□□ 0.61
SMG9-210ENST00000600097 TMEM134Q9H6X4 195 aa18.85■□□□□ 0.61
SMG9-210ENST00000600097 NOL7Q9UMY1 257 aaKnown RBP18.85■□□□□ 0.61
SMG9-210ENST00000600097 CCDC169A6NNP5 214 aa18.84■□□□□ 0.61
SMG9-210ENST00000600097 H7C4K7 107 aa18.84■□□□□ 0.61
SMG9-210ENST00000600097 PODXLO00592 558 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms