RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 ZBTB45Q96K62 511 aaPredicted RBP15.43■□□□□ 0.06
LIG1-218ENST00000599322 PPP1R10Q96QC0 940 aaKnown RBP15.43■□□□□ 0.06
LIG1-218ENST00000599322 TSPAN18Q96SJ8 248 aa15.43■□□□□ 0.06
LIG1-218ENST00000599322 MSTO1Q9BUK6 570 aa15.43■□□□□ 0.06
LIG1-218ENST00000599322 ADAM7Q9H2U9 754 aa15.43■□□□□ 0.06
LIG1-218ENST00000599322 SFXN1Q9H9B4 322 aa15.43■□□□□ 0.06
LIG1-218ENST00000599322 RPF1Q9H9Y2 349 aaKnown RBP15.43■□□□□ 0.06
LIG1-218ENST00000599322 RXFP1Q9HBX9 757 aa15.43■□□□□ 0.06
LIG1-218ENST00000599322 CHST7Q9NS84 486 aa15.43■□□□□ 0.06
LIG1-218ENST00000599322 FNIP2Q9P278 1114 aa15.43■□□□□ 0.06
LIG1-218ENST00000599322 NR2E1Q9Y466 385 aa15.43■□□□□ 0.06
LIG1-218ENST00000599322 WDFY4Q6ZS81 3184 aa15.42■□□□□ 0.06
LIG1-218ENST00000599322 OGTO15294 1046 aa15.42■□□□□ 0.06
LIG1-218ENST00000599322 DCXO43602 365 aa15.42■□□□□ 0.06
LIG1-218ENST00000599322 KCNE1P15382 129 aa15.42■□□□□ 0.06
LIG1-218ENST00000599322 EPCAMP16422 314 aa15.42■□□□□ 0.06
LIG1-218ENST00000599322 NMT1P30419 496 aaKnown RBP15.42■□□□□ 0.06
LIG1-218ENST00000599322 RBM10P98175 930 aaKnown RBP15.42■□□□□ 0.06
LIG1-218ENST00000599322 GTF2BQ00403 316 aa15.42■□□□□ 0.06
LIG1-218ENST00000599322 TAS1R1Q7RTX1 841 aa15.42■□□□□ 0.06
LIG1-218ENST00000599322 CD302Q8IX05 232 aa15.42■□□□□ 0.06
LIG1-218ENST00000599322 HASPINQ8TF76 798 aa15.42■□□□□ 0.06
LIG1-218ENST00000599322 SLC22A17Q8WUG5 538 aa15.42■□□□□ 0.06
LIG1-218ENST00000599322 HDAC7Q8WUI4 952 aa15.42■□□□□ 0.06
LIG1-218ENST00000599322 RPGRIP1Q96KN7 1286 aa15.42■□□□□ 0.06
LIG1-218ENST00000599322 SNX27Q96L92 541 aa15.42■□□□□ 0.06
LIG1-218ENST00000599322 ACCSQ96QU6 501 aa15.42■□□□□ 0.06
LIG1-218ENST00000599322 VN1R3Q9BXE9 311 aa15.42■□□□□ 0.06
LIG1-218ENST00000599322 GPR62Q9BZJ7 368 aa15.42■□□□□ 0.06
LIG1-218ENST00000599322 TNMDQ9H2S6 317 aa15.42■□□□□ 0.06
LIG1-218ENST00000599322 ST6GALNAC4Q9H4F1 302 aa15.42■□□□□ 0.06
LIG1-218ENST00000599322 MAGEF1Q9HAY2 307 aa15.42■□□□□ 0.06
LIG1-218ENST00000599322 PANK4Q9NVE7 773 aa15.42■□□□□ 0.06
LIG1-218ENST00000599322 TECTAO75443 2155 aa15.42■□□□□ 0.06
LIG1-218ENST00000599322 MYH11P35749 1972 aa15.42■□□□□ 0.06
LIG1-218ENST00000599322 MYMKA6NI61 221 aa15.41■□□□□ 0.06
LIG1-218ENST00000599322 TMEM189-UBE2V1I3L0A0 370 aa15.41■□□□□ 0.06
LIG1-218ENST00000599322 TULP1O00294 542 aaPredicted RBP15.41■□□□□ 0.06
LIG1-218ENST00000599322 TEX28O15482 410 aa15.41■□□□□ 0.06
LIG1-218ENST00000599322 LILRB3O75022 631 aa15.41■□□□□ 0.06
LIG1-218ENST00000599322 KIF4AO95239 1232 aa15.41■□□□□ 0.06
LIG1-218ENST00000599322 GCNT3O95395 438 aa15.41■□□□□ 0.06
LIG1-218ENST00000599322 PIGRP01833 764 aa15.41■□□□□ 0.06
LIG1-218ENST00000599322 CLCN4P51793 760 aa15.41■□□□□ 0.06
LIG1-218ENST00000599322 CLCNKBP51801 687 aa15.41■□□□□ 0.06
LIG1-218ENST00000599322 KRT85P78386 507 aa15.41■□□□□ 0.06
LIG1-218ENST00000599322 XKR4Q5GH76 650 aa15.41■□□□□ 0.06
LIG1-218ENST00000599322 ADALQ6DHV7 355 aa15.41■□□□□ 0.06
LIG1-218ENST00000599322 SYCE2Q6PIF2 218 aa15.41■□□□□ 0.06
LIG1-218ENST00000599322 CYP26C1Q6V0L0 522 aa15.41■□□□□ 0.06
LIG1-218ENST00000599322 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.41■□□□□ 0.06
LIG1-218ENST00000599322 ZNF720Q7Z2F6 126 aa15.41■□□□□ 0.06
LIG1-218ENST00000599322 SFR1Q86XK3 245 aa15.41■□□□□ 0.06
LIG1-218ENST00000599322 MAP4K3Q8IVH8 894 aa15.41■□□□□ 0.06
LIG1-218ENST00000599322 DHX58Q96C10 678 aa15.41■□□□□ 0.06
LIG1-218ENST00000599322 FAM212AQ96EL1 285 aa15.41■□□□□ 0.06
LIG1-218ENST00000599322 S1PR5Q9H228 398 aa15.41■□□□□ 0.06
LIG1-218ENST00000599322 PLEKHA4Q9H4M7 779 aa15.41■□□□□ 0.06
LIG1-218ENST00000599322 PIDD1Q9HB75 910 aa15.41■□□□□ 0.06
LIG1-218ENST00000599322 CNTN3Q9P232 1028 aa15.41■□□□□ 0.06
LIG1-218ENST00000599322 PODXLO00592 558 aa15.4■□□□□ 0.06
LIG1-218ENST00000599322 PSMD5Q16401 504 aa15.4■□□□□ 0.06
LIG1-218ENST00000599322 UPP1Q16831 310 aa15.4■□□□□ 0.06
LIG1-218ENST00000599322 ALKAL1Q6UXT8 129 aa15.4■□□□□ 0.06
LIG1-218ENST00000599322 ANKS3Q6ZW76 656 aa15.4■□□□□ 0.06
LIG1-218ENST00000599322 PALB2Q86YC2 1186 aa15.4■□□□□ 0.06
LIG1-218ENST00000599322 RNF168Q8IYW5 571 aaPredicted RBP15.4■□□□□ 0.06
LIG1-218ENST00000599322 CEP57L1Q8IYX8 460 aa15.4■□□□□ 0.06
LIG1-218ENST00000599322 LRRC15Q8TF66 581 aa15.4■□□□□ 0.06
LIG1-218ENST00000599322 PIK3R5Q8WYR1 880 aa15.4■□□□□ 0.06
LIG1-218ENST00000599322 POMGNT1Q8WZA1 660 aa15.4■□□□□ 0.06
LIG1-218ENST00000599322 SUSD6Q92537 303 aa15.4■□□□□ 0.06
LIG1-218ENST00000599322 KIF12Q96FN5 646 aa15.4■□□□□ 0.06
LIG1-218ENST00000599322 PAAF1Q9BRP4 392 aa15.4■□□□□ 0.06
LIG1-218ENST00000599322 TMEM206Q9H813 350 aa15.4■□□□□ 0.06
LIG1-218ENST00000599322 MAN1C1Q9NR34 630 aa15.4■□□□□ 0.06
LIG1-218ENST00000599322 TSHZ2Q9NRE2 1034 aa15.4■□□□□ 0.06
LIG1-218ENST00000599322 UBQLN1Q9UMX0 589 aaKnown RBP15.4■□□□□ 0.06
LIG1-218ENST00000599322 A0A0B4J269 797 aa15.39■□□□□ 0.05
LIG1-218ENST00000599322 F8W810 466 aa15.39■□□□□ 0.05
LIG1-218ENST00000599322 H7C4K7 107 aa15.39■□□□□ 0.05
LIG1-218ENST00000599322 LDHAP00338 332 aaKnown RBP15.39■□□□□ 0.05
LIG1-218ENST00000599322 CXCL8P10145 99 aa15.39■□□□□ 0.05
LIG1-218ENST00000599322 ASIC1P78348 528 aa15.39■□□□□ 0.05
LIG1-218ENST00000599322 DNM1Q05193 864 aaKnown RBP15.39■□□□□ 0.05
LIG1-218ENST00000599322 NAB2Q15742 525 aa15.39■□□□□ 0.05
LIG1-218ENST00000599322 SLC10A6Q3KNW5 377 aa15.39■□□□□ 0.05
LIG1-218ENST00000599322 SEZ6Q53EL9 994 aa15.39■□□□□ 0.05
LIG1-218ENST00000599322 ZC2HC1CQ53FD0 456 aaPredicted RBP15.39■□□□□ 0.05
LIG1-218ENST00000599322 LIN9Q5TKA1 542 aa15.39■□□□□ 0.05
LIG1-218ENST00000599322 TMC5Q6UXY8 1006 aa15.39■□□□□ 0.05
LIG1-218ENST00000599322 GLYCTKQ8IVS8 523 aa15.39■□□□□ 0.05
LIG1-218ENST00000599322 C12orf76Q8N812 135 aaPredicted RBP15.39■□□□□ 0.05
LIG1-218ENST00000599322 APPL2Q8NEU8 664 aa15.39■□□□□ 0.05
LIG1-218ENST00000599322 BEST2Q8NFU1 509 aa15.39■□□□□ 0.05
LIG1-218ENST00000599322 STAMQ92783 540 aa15.39■□□□□ 0.05
LIG1-218ENST00000599322 ACSF2Q96CM8 615 aaPredicted RBP15.39■□□□□ 0.05
LIG1-218ENST00000599322 B3GALT6Q96L58 329 aa15.39■□□□□ 0.05
LIG1-218ENST00000599322 SPATA32Q96LK8 384 aa15.39■□□□□ 0.05
LIG1-218ENST00000599322 OLFML3Q9NRN5 406 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms