RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 SPATA31D4Q6ZUB0 917 aa13.29□□□□□ -0.28
LIG1-217ENST00000599165 GPR149Q86SP6 731 aa13.29□□□□□ -0.28
LIG1-217ENST00000599165 MAP4K3Q8IVH8 894 aa13.29□□□□□ -0.28
LIG1-217ENST00000599165 HSCBQ8IWL3 235 aa13.29□□□□□ -0.28
LIG1-217ENST00000599165 KRI1Q8N9T8 703 aaKnown RBP13.29□□□□□ -0.28
LIG1-217ENST00000599165 PIK3R5Q8WYR1 880 aa13.29□□□□□ -0.28
LIG1-217ENST00000599165 ZNF707Q96C28 371 aaPredicted RBP13.29□□□□□ -0.28
LIG1-217ENST00000599165 ACAP3Q96P50 834 aa13.29□□□□□ -0.28
LIG1-217ENST00000599165 FGFBP2Q9BYJ0 223 aa13.29□□□□□ -0.28
LIG1-217ENST00000599165 ST6GALNAC4Q9H4F1 302 aa13.29□□□□□ -0.28
LIG1-217ENST00000599165 SFXN1Q9H9B4 322 aa13.29□□□□□ -0.28
LIG1-217ENST00000599165 MAN1C1Q9NR34 630 aa13.29□□□□□ -0.28
LIG1-217ENST00000599165 FNIP2Q9P278 1114 aa13.29□□□□□ -0.28
LIG1-217ENST00000599165 DAXXQ9UER7 740 aaPredicted RBP13.29□□□□□ -0.28
LIG1-217ENST00000599165 ZDBF2Q9HCK1 2354 aa13.29□□□□□ -0.28
LIG1-217ENST00000599165 TCHHQ07283 1943 aa13.29□□□□□ -0.28
LIG1-217ENST00000599165 MUC6Q6W4X9 2439 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 TTC26A0AVF1 554 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 C2CD4DB7Z1M9 353 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 TGM5O43548 720 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 RFPL2O75678 378 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 B3GAT3O94766 335 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 F13A1P00488 732 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 ADH1AP07327 375 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 ADRB2P07550 413 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 ZSCAN22P10073 491 aaPredicted RBP13.28□□□□□ -0.28
LIG1-217ENST00000599165 CXCL8P10145 99 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 KCNA1Q09470 495 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 ZBTB6Q15916 424 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 TMEM31Q5JXX7 168 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 RRAGBQ5VZM2 374 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 DCLRE1AQ6PJP8 1040 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 SHC4Q6S5L8 630 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 DYMQ7RTS9 669 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 SFR1Q86XK3 245 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 PALB2Q86YC2 1186 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 GLYCTKQ8IVS8 523 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 CMASQ8NFW8 434 aaPredicted RBP13.28□□□□□ -0.28
LIG1-217ENST00000599165 RASSF8Q8NHQ8 419 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 DDX12PQ92771 950 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 TCHPQ9BT92 498 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 TTPALQ9BTX7 342 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 PANK2Q9BZ23 570 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 TOPORSQ9NS56 1045 aaPredicted RBP13.28□□□□□ -0.28
LIG1-217ENST00000599165 TUBGCP4Q9UGJ1 667 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 KCNG1Q9UIX4 513 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 SSX2IPQ9Y2D8 614 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 SCN1AP35498 2009 aa13.28□□□□□ -0.28
LIG1-217ENST00000599165 TSC2P49815 1807 aa13.27□□□□□ -0.28
LIG1-217ENST00000599165 A0A0B4J269 797 aa13.27□□□□□ -0.29
LIG1-217ENST00000599165 FRMD3A2A2Y4 597 aa13.27□□□□□ -0.29
LIG1-217ENST00000599165 SPTLC2O15270 562 aa13.27□□□□□ -0.29
LIG1-217ENST00000599165 CLDN3O15551 220 aa13.27□□□□□ -0.29
LIG1-217ENST00000599165 N4BP1O75113 896 aaKnown RBP13.27□□□□□ -0.29
LIG1-217ENST00000599165 PPP6R2O75170 966 aa13.27□□□□□ -0.29
LIG1-217ENST00000599165 GLUD1P00367 558 aa13.27□□□□□ -0.29
LIG1-217ENST00000599165 ALADP13716 330 aa13.27□□□□□ -0.29
LIG1-217ENST00000599165 COL9A1P20849 921 aa13.27□□□□□ -0.29
LIG1-217ENST00000599165 TKTP29401 623 aaKnown RBP13.27□□□□□ -0.29
LIG1-217ENST00000599165 CASP5P51878 434 aa13.27□□□□□ -0.29
LIG1-217ENST00000599165 YARSP54577 528 aaKnown RBP13.27□□□□□ -0.29
LIG1-217ENST00000599165 SPAG1Q07617 926 aa13.27□□□□□ -0.29
LIG1-217ENST00000599165 STK38Q15208 465 aa13.27□□□□□ -0.29
LIG1-217ENST00000599165 ENOX2Q16206 610 aaKnown RBP13.27□□□□□ -0.29
LIG1-217ENST00000599165 CES5AQ6NT32 575 aa13.27□□□□□ -0.29
LIG1-217ENST00000599165 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.27□□□□□ -0.29
LIG1-217ENST00000599165 ZNF720Q7Z2F6 126 aa13.27□□□□□ -0.29
LIG1-217ENST00000599165 APBB1IPQ7Z5R6 666 aaPredicted RBP13.27□□□□□ -0.29
LIG1-217ENST00000599165 SPRYD3Q8NCJ5 442 aa13.27□□□□□ -0.29
LIG1-217ENST00000599165 DDX27Q96GQ7 796 aaKnown RBP13.27□□□□□ -0.29
LIG1-217ENST00000599165 CHAMP1Q96JM3 812 aa13.27□□□□□ -0.29
LIG1-217ENST00000599165 UROC1Q96N76 676 aa13.27□□□□□ -0.29
LIG1-217ENST00000599165 NECTIN4Q96NY8 510 aa13.27□□□□□ -0.29
LIG1-217ENST00000599165 ZHX3Q9H4I2 956 aa13.27□□□□□ -0.29
LIG1-217ENST00000599165 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.27□□□□□ -0.29
LIG1-217ENST00000599165 CCDC39Q9UFE4 941 aa13.27□□□□□ -0.29
LIG1-217ENST00000599165 ZDHHC9Q9Y397 364 aa13.27□□□□□ -0.29
LIG1-217ENST00000599165 STYXL1Q9Y6J8 313 aa13.27□□□□□ -0.29
LIG1-217ENST00000599165 H0YCG3 227 aa13.26□□□□□ -0.29
LIG1-217ENST00000599165 PODXLO00592 558 aa13.26□□□□□ -0.29
LIG1-217ENST00000599165 HNRNPDLO14979 420 aaKnown RBP13.26□□□□□ -0.29
LIG1-217ENST00000599165 TBC1D4O60343 1298 aa13.26□□□□□ -0.29
LIG1-217ENST00000599165 TBCAO75347 108 aaKnown RBP13.26□□□□□ -0.29
LIG1-217ENST00000599165 YEATS4O95619 227 aa13.26□□□□□ -0.29
LIG1-217ENST00000599165 C1RP00736 705 aa13.26□□□□□ -0.29
LIG1-217ENST00000599165 KRT18P05783 430 aaKnown RBP13.26□□□□□ -0.29
LIG1-217ENST00000599165 ADSSP30520 456 aa13.26□□□□□ -0.29
LIG1-217ENST00000599165 MTHFRP42898 656 aa13.26□□□□□ -0.29
LIG1-217ENST00000599165 LIG4P49917 911 aa13.26□□□□□ -0.29
LIG1-217ENST00000599165 GUCY2FP51841 1108 aa13.26□□□□□ -0.29
LIG1-217ENST00000599165 PSMD5Q16401 504 aa13.26□□□□□ -0.29
LIG1-217ENST00000599165 FOXD4L6Q3SYB3 417 aaPredicted RBP13.26□□□□□ -0.29
LIG1-217ENST00000599165 FOXD4L3Q6VB84 417 aaPredicted RBP13.26□□□□□ -0.29
LIG1-217ENST00000599165 C15orf39Q6ZRI6 1047 aa13.26□□□□□ -0.29
LIG1-217ENST00000599165 CEP57Q86XR8 500 aa13.26□□□□□ -0.29
LIG1-217ENST00000599165 PDILTQ8N807 584 aa13.26□□□□□ -0.29
LIG1-217ENST00000599165 TMEM87AQ8NBN3 555 aa13.26□□□□□ -0.29
LIG1-217ENST00000599165 RIPOR3Q96MK2 946 aa13.26□□□□□ -0.29
LIG1-217ENST00000599165 RHOBTB2Q9BYZ6 727 aa13.26□□□□□ -0.29
LIG1-217ENST00000599165 SMOC2Q9H3U7 446 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms