RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 PDXDC1Q6P996 788 aa13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 TMEM173Q86WV6 379 aaPredicted RBP13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 HPS3Q969F9 1004 aa13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 FAM212AQ96EL1 285 aa13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 KIF12Q96FN5 646 aa13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 GBP4Q96PP9 640 aa13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 HERC2P3Q9BVR0 1158 aa13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 ZBP1Q9H171 429 aa13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 ASB7Q9H672 318 aa13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 TLE6Q9H808 572 aa13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 KIAA1586Q9HCI6 787 aa13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 MRPL17Q9NRX2 175 aaKnown RBP13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 UBQLN1Q9UMX0 589 aaKnown RBP13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 DERAQ9Y315 318 aa13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 MTCL1Q9Y4B5 1905 aaKnown RBP13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 PLXNA3P51805 1871 aa13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 TISP43B9A030 160 aa13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 EXTL3O43909 919 aa13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 RHOBTB3O94955 611 aa13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 KIF4AO95239 1232 aa13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 PRR29P0C7W0 189 aa13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 CYP3A5P20815 502 aa13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 IRS1P35568 1242 aa13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 NRIP1P48552 1158 aa13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 GLUD2P49448 558 aa13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 ACOT2P49753 483 aa13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 SNW1Q13573 536 aaKnown RBP13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 KCNB1Q14721 858 aa13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 TMEM132DQ14C87 1099 aa13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 KNOP1Q1ED39 458 aaKnown RBP13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 USP41Q3LFD5 358 aa13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 DCLRE1AQ6PJP8 1040 aa13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 EP400NLQ6ZTU2 488 aa13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 NT5DC4Q86YG4 428 aa13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 NELFCDQ8IXH7 590 aa13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 GPD1LQ8N335 351 aa13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 ENGASEQ8NFI3 743 aa13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 BEST2Q8NFU1 509 aa13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 NOC3LQ8WTT2 800 aaKnown RBP13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 BCL7CQ8WUZ0 217 aaPredicted RBP13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 SCFD1Q8WVM8 642 aa13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 PABPC5Q96DU9 382 aaKnown RBP13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 FAM213AQ9BRX8 229 aa13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 EMILIN2Q9BXX0 1053 aa13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 MARCH5Q9NX47 278 aa13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 CLDND1Q9NY35 253 aa13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 IRAK3Q9Y616 596 aa13.1□□□□□ -0.31
ARHGEF1-216ENST00000598587 C2orf71A6NGG8 1288 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 LACTBL1A8MY62 500 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 GOLGA6L22H0YM25 854 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 PODXLO00592 558 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 B3GAT3O94766 335 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 CXCL14O95715 111 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 ADRB2P07550 413 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 PAX3P23760 479 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 ADSSP30520 456 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 CLCNKBP51801 687 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 HYAL1Q12794 435 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 SURF1Q15526 300 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 UPP1Q16831 310 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 ZBTB41Q5SVQ8 909 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 ELMSAN1Q6PJG2 1045 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 RBM23Q86U06 439 aaKnown RBP13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 PPFIBP1Q86W92 1011 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 BRSK2Q8IWQ3 736 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 ELOA2Q8IYF1 753 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 GPR65Q8IYL9 337 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 EFHBQ8N7U6 833 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 MRPL43Q8N983 215 aaKnown RBP13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 GLIS3Q8NEA6 775 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 ATXN2LQ8WWM7 1075 aaKnown RBP13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 SMARCE1Q969G3 411 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 SAAL1Q96ER3 474 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 ZMAT2Q96NC0 199 aaKnown RBP13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 GSDMAQ96QA5 445 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 IGFLR1Q9H665 355 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 UBE2ZQ9H832 354 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 TSHZ2Q9NRE2 1034 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 AGPAT3Q9NRZ7 376 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 RBAKQ9NYW8 714 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 HSPBP1Q9NZL4 362 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 C2CD2Q9Y426 696 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 NUB1Q9Y5A7 615 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 TSC2P49815 1807 aa13.09□□□□□ -0.31
ARHGEF1-216ENST00000598587 ADH1AP07327 375 aa13.08□□□□□ -0.32
ARHGEF1-216ENST00000598587 NDUFV1P49821 464 aa13.08□□□□□ -0.32
ARHGEF1-216ENST00000598587 MRPS5P82675 430 aaKnown RBP13.08□□□□□ -0.32
ARHGEF1-216ENST00000598587 DSG1Q02413 1049 aa13.08□□□□□ -0.32
ARHGEF1-216ENST00000598587 STK4Q13043 487 aa13.08□□□□□ -0.32
ARHGEF1-216ENST00000598587 PNOCQ13519 176 aa13.08□□□□□ -0.32
ARHGEF1-216ENST00000598587 PTPN14Q15678 1187 aa13.08□□□□□ -0.32
ARHGEF1-216ENST00000598587 DUSP6Q16828 381 aa13.08□□□□□ -0.32
ARHGEF1-216ENST00000598587 JADE1Q6IE81 842 aa13.08□□□□□ -0.32
ARHGEF1-216ENST00000598587 ADGRD2Q7Z7M1 963 aa13.08□□□□□ -0.32
ARHGEF1-216ENST00000598587 RNF168Q8IYW5 571 aaPredicted RBP13.08□□□□□ -0.32
ARHGEF1-216ENST00000598587 KIAA0895Q8NCT3 520 aa13.08□□□□□ -0.32
ARHGEF1-216ENST00000598587 HASPINQ8TF76 798 aa13.08□□□□□ -0.32
ARHGEF1-216ENST00000598587 CACTINQ8WUQ7 758 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms