RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 ATG2BQ96BY7 2078 aa12.1□□□□□ -0.47
ZNF548-207ENST00000597400 ITPR1Q14643 2758 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 ANKRD11Q6UB99 2663 aaPredicted RBP12.09□□□□□ -0.47
ZNF548-207ENST00000597400 ANK1P16157 1881 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 CHURC1-FNTBB4DL54 471 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 I3L4J1 428 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 K7ESF4 209 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 RECQL4O94761 1208 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 CHRNB1P11230 501 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 FGFR3P22607 806 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 TKTP29401 623 aaKnown RBP12.09□□□□□ -0.47
ZNF548-207ENST00000597400 PDIA3P30101 505 aaKnown RBP12.09□□□□□ -0.47
ZNF548-207ENST00000597400 FNTBP49356 437 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 POU5F1BQ06416 359 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 COL9A2Q14055 689 aaPredicted RBP12.09□□□□□ -0.47
ZNF548-207ENST00000597400 MXD4Q14582 209 aaPredicted RBP12.09□□□□□ -0.47
ZNF548-207ENST00000597400 EPHA7Q15375 998 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 FAM78AQ5JUQ0 283 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 N4BP2L1Q5TBK1 243 aaPredicted RBP12.09□□□□□ -0.47
ZNF548-207ENST00000597400 NCAPH2Q6IBW4 605 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.09□□□□□ -0.47
ZNF548-207ENST00000597400 MAMSTRQ6ZN01 415 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 MAP4K3Q8IVH8 894 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 EXOC8Q8IYI6 725 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 HACE1Q8IYU2 909 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 FBXL16Q8N461 479 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 KCNB2Q92953 911 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 DDX27Q96GQ7 796 aaKnown RBP12.09□□□□□ -0.47
ZNF548-207ENST00000597400 ZSWIM3Q96MP5 696 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 JAKMIP1Q96N16 626 aaKnown RBP12.09□□□□□ -0.47
ZNF548-207ENST00000597400 NFKBIZQ9BYH8 718 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 C22orf23Q9BZE7 217 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 LMAN1LQ9HAT1 526 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 ZNF334Q9HCZ1 680 aaPredicted RBP12.09□□□□□ -0.47
ZNF548-207ENST00000597400 GPRC5CQ9NQ84 441 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 SNTG2Q9NY99 539 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 GDE1Q9NZC3 331 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 ANGPTL2Q9UKU9 493 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 RAB23Q9ULC3 237 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 MRPS17Q9Y2R5 130 aaKnown RBP12.09□□□□□ -0.47
ZNF548-207ENST00000597400 SNX14Q9Y5W7 946 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 FREM2Q5SZK8 3169 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 PKD1L2Q7Z442 2459 aa12.09□□□□□ -0.47
ZNF548-207ENST00000597400 LAMA5O15230 3695 aa12.08□□□□□ -0.48
ZNF548-207ENST00000597400 A0A087WWV3 80 aa12.08□□□□□ -0.48
ZNF548-207ENST00000597400 ARNTLO00327 626 aa12.08□□□□□ -0.48
ZNF548-207ENST00000597400 TM4SF5O14894 197 aa12.08□□□□□ -0.48
ZNF548-207ENST00000597400 DKC1O60832 514 aaKnown RBP eCLIP12.08□□□□□ -0.48
ZNF548-207ENST00000597400 DTNBO60941 627 aa12.08□□□□□ -0.48
ZNF548-207ENST00000597400 MOSPD3O75425 235 aa12.08□□□□□ -0.48
ZNF548-207ENST00000597400 SLITRK3O94933 977 aa12.08□□□□□ -0.48
ZNF548-207ENST00000597400 HMGB1P09429 215 aaKnown RBP12.08□□□□□ -0.48
ZNF548-207ENST00000597400 RPS6KB1P23443 525 aa12.08□□□□□ -0.48
ZNF548-207ENST00000597400 CCR3P51677 355 aa12.08□□□□□ -0.48
ZNF548-207ENST00000597400 NRLP54845 237 aa12.08□□□□□ -0.48
ZNF548-207ENST00000597400 TFDP1Q14186 410 aa12.08□□□□□ -0.48
ZNF548-207ENST00000597400 SIM2Q14190 667 aaPredicted RBP12.08□□□□□ -0.48
ZNF548-207ENST00000597400 UVSSAQ2YD98 709 aa12.08□□□□□ -0.48
ZNF548-207ENST00000597400 EARS2Q5JPH6 523 aaKnown RBP12.08□□□□□ -0.48
ZNF548-207ENST00000597400 Q6ZS52 159 aa12.08□□□□□ -0.48
ZNF548-207ENST00000597400 FAM20AQ96MK3 541 aa12.08□□□□□ -0.48
ZNF548-207ENST00000597400 ASB16Q96NS5 453 aa12.08□□□□□ -0.48
ZNF548-207ENST00000597400 PDZD7Q9H5P4 517 aa12.08□□□□□ -0.48
ZNF548-207ENST00000597400 BRD9Q9H8M2 597 aa12.08□□□□□ -0.48
ZNF548-207ENST00000597400 GOLGA2P5Q9HBQ8 144 aa12.08□□□□□ -0.48
ZNF548-207ENST00000597400 AVENQ9NQS1 362 aaPredicted RBP12.08□□□□□ -0.48
ZNF548-207ENST00000597400 GJB4Q9NTQ9 266 aa12.08□□□□□ -0.48
ZNF548-207ENST00000597400 RBM12Q9NTZ6 932 aaKnown RBP12.08□□□□□ -0.48
ZNF548-207ENST00000597400 KCNJ14Q9UNX9 436 aa12.08□□□□□ -0.48
ZNF548-207ENST00000597400 PIAS3Q9Y6X2 628 aa12.08□□□□□ -0.48
ZNF548-207ENST00000597400 FASNP49327 2511 aaKnown RBP12.08□□□□□ -0.48
ZNF548-207ENST00000597400 ARHGEF37A1IGU5 675 aa12.07□□□□□ -0.48
ZNF548-207ENST00000597400 WDR27A2RRH5 827 aa12.07□□□□□ -0.48
ZNF548-207ENST00000597400 FAM205CA6NFA0 338 aa12.07□□□□□ -0.48
ZNF548-207ENST00000597400 OBSL1O75147 1896 aa12.07□□□□□ -0.48
ZNF548-207ENST00000597400 THP07101 528 aa12.07□□□□□ -0.48
ZNF548-207ENST00000597400 GDI1P31150 447 aa12.07□□□□□ -0.48
ZNF548-207ENST00000597400 EVCP57679 992 aa12.07□□□□□ -0.48
ZNF548-207ENST00000597400 IRX6P78412 446 aaPredicted RBP12.07□□□□□ -0.48
ZNF548-207ENST00000597400 SHC2P98077 582 aa12.07□□□□□ -0.48
ZNF548-207ENST00000597400 ROR1Q01973 937 aa12.07□□□□□ -0.48
ZNF548-207ENST00000597400 NCBP1Q09161 790 aaKnown RBP12.07□□□□□ -0.48
ZNF548-207ENST00000597400 TOB2Q14106 344 aaPredicted RBP12.07□□□□□ -0.48
ZNF548-207ENST00000597400 SF3A2Q15428 464 aaKnown RBP12.07□□□□□ -0.48
ZNF548-207ENST00000597400 CCDC6Q16204 474 aa12.07□□□□□ -0.48
ZNF548-207ENST00000597400 GLRA4Q5JXX5 417 aa12.07□□□□□ -0.48
ZNF548-207ENST00000597400 PPP4R3AQ6IN85 833 aa12.07□□□□□ -0.48
ZNF548-207ENST00000597400 BLOC1S2Q6QNY1 142 aa12.07□□□□□ -0.48
ZNF548-207ENST00000597400 PPP4R3CPQ6ZMV5 832 aa12.07□□□□□ -0.48
ZNF548-207ENST00000597400 OTUD6AQ7L8S5 288 aa12.07□□□□□ -0.48
ZNF548-207ENST00000597400 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.07□□□□□ -0.48
ZNF548-207ENST00000597400 TPH2Q8IWU9 490 aa12.07□□□□□ -0.48
ZNF548-207ENST00000597400 FAM160A2Q8N612 972 aaPredicted RBP12.07□□□□□ -0.48
ZNF548-207ENST00000597400 FAM3CQ92520 227 aa12.07□□□□□ -0.48
ZNF548-207ENST00000597400 NUP205Q92621 2012 aa12.07□□□□□ -0.48
ZNF548-207ENST00000597400 RSPRY1Q96DX4 576 aa12.07□□□□□ -0.48
ZNF548-207ENST00000597400 POLR3FQ9H1D9 316 aaPredicted RBP12.07□□□□□ -0.48
ZNF548-207ENST00000597400 ZSWIM4Q9H7M6 989 aa12.07□□□□□ -0.48
ZNF548-207ENST00000597400 DENND4CQ5VZ89 1909 aa12.07□□□□□ -0.48
ZNF548-207ENST00000597400 TSC2P49815 1807 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms