RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 CDY1Q9Y6F8 540 aa17.19■□□□□ 0.34
LIG1-214ENST00000597146 ZNF806P0C7X5 589 aa17.18■□□□□ 0.34
LIG1-214ENST00000597146 RFC5P40937 340 aa17.18■□□□□ 0.34
LIG1-214ENST00000597146 USP11P51784 963 aa17.18■□□□□ 0.34
LIG1-214ENST00000597146 PTENP60484 403 aa17.18■□□□□ 0.34
LIG1-214ENST00000597146 EXOSC10Q01780 885 aaKnown RBP17.18■□□□□ 0.34
LIG1-214ENST00000597146 MBTD1Q05BQ5 628 aa17.18■□□□□ 0.34
LIG1-214ENST00000597146 ADCK5Q3MIX3 580 aa17.18■□□□□ 0.34
LIG1-214ENST00000597146 Q4G0T1 1027 aa17.18■□□□□ 0.34
LIG1-214ENST00000597146 ETNPPLQ8TBG4 499 aa17.18■□□□□ 0.34
LIG1-214ENST00000597146 TBCKQ8TEA7 893 aa17.18■□□□□ 0.34
LIG1-214ENST00000597146 COL26A1Q96A83 441 aa17.18■□□□□ 0.34
LIG1-214ENST00000597146 CXCL16Q9H2A7 254 aa17.18■□□□□ 0.34
LIG1-214ENST00000597146 ZMYM2Q9UBW7 1377 aa17.17■□□□□ 0.34
LIG1-214ENST00000597146 SRRM3A6NNA2 597 aaPredicted RBP17.17■□□□□ 0.34
LIG1-214ENST00000597146 SOBPA7XYQ1 873 aa17.17■□□□□ 0.34
LIG1-214ENST00000597146 GIPC1O14908 333 aa17.17■□□□□ 0.34
LIG1-214ENST00000597146 EPN2O95208 641 aa17.17■□□□□ 0.34
LIG1-214ENST00000597146 PAPSS2O95340 614 aaPredicted RBP17.17■□□□□ 0.34
LIG1-214ENST00000597146 TOP3BO95985 862 aaKnown RBP17.17■□□□□ 0.34
LIG1-214ENST00000597146 IGFBP6P24592 240 aaPredicted RBP17.17■□□□□ 0.34
LIG1-214ENST00000597146 HSPA4P34932 840 aa17.17■□□□□ 0.34
LIG1-214ENST00000597146 CCR2P41597 374 aa17.17■□□□□ 0.34
LIG1-214ENST00000597146 QARSP47897 775 aaKnown RBP17.17■□□□□ 0.34
LIG1-214ENST00000597146 BICD2Q8TD16 824 aa17.17■□□□□ 0.34
LIG1-214ENST00000597146 TCP11Q8WWU5 503 aa17.17■□□□□ 0.34
LIG1-214ENST00000597146 ZSWIM3Q96MP5 696 aa17.17■□□□□ 0.34
LIG1-214ENST00000597146 ASB16Q96NS5 453 aa17.17■□□□□ 0.34
LIG1-214ENST00000597146 CORO1BQ9BR76 489 aa17.17■□□□□ 0.34
LIG1-214ENST00000597146 AVENQ9NQS1 362 aaPredicted RBP17.17■□□□□ 0.34
LIG1-214ENST00000597146 VPS54Q9P1Q0 977 aa17.17■□□□□ 0.34
LIG1-214ENST00000597146 MTRRQ9UBK8 725 aa17.17■□□□□ 0.34
LIG1-214ENST00000597146 ATG2BQ96BY7 2078 aa17.16■□□□□ 0.34
LIG1-214ENST00000597146 CCDC196A0A1B0GTZ2 297 aa17.16■□□□□ 0.34
LIG1-214ENST00000597146 WDR27A2RRH5 827 aa17.16■□□□□ 0.34
LIG1-214ENST00000597146 PTGESO14684 152 aa17.16■□□□□ 0.34
LIG1-214ENST00000597146 PSMC3P17980 439 aa17.16■□□□□ 0.34
LIG1-214ENST00000597146 VIPR2P41587 438 aa17.16■□□□□ 0.34
LIG1-214ENST00000597146 SOX9P48436 509 aa17.16■□□□□ 0.34
LIG1-214ENST00000597146 NOVA1P51513 510 aaKnown RBP17.16■□□□□ 0.34
LIG1-214ENST00000597146 RING1Q06587 406 aa17.16■□□□□ 0.34
LIG1-214ENST00000597146 CAPSQ13938 189 aa17.16■□□□□ 0.34
LIG1-214ENST00000597146 TCEAL6Q6IPX3 200 aa17.16■□□□□ 0.34
LIG1-214ENST00000597146 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.16■□□□□ 0.34
LIG1-214ENST00000597146 Q6ZUG5 572 aa17.16■□□□□ 0.34
LIG1-214ENST00000597146 WDR5BQ86VZ2 330 aa17.16■□□□□ 0.34
LIG1-214ENST00000597146 TCEAL3Q969E4 200 aa17.16■□□□□ 0.34
LIG1-214ENST00000597146 ADAM33Q9BZ11 813 aa17.16■□□□□ 0.34
LIG1-214ENST00000597146 TRPV5Q9NQA5 729 aa17.16■□□□□ 0.34
LIG1-214ENST00000597146 XPNPEP1Q9NQW7 623 aa17.16■□□□□ 0.34
LIG1-214ENST00000597146 LHX6Q9UPM6 363 aa17.16■□□□□ 0.34
LIG1-214ENST00000597146 WASF3Q9UPY6 502 aa17.16■□□□□ 0.34
LIG1-214ENST00000597146 SNX14Q9Y5W7 946 aa17.16■□□□□ 0.34
LIG1-214ENST00000597146 LOC400499M0QZD8 3231 aa17.16■□□□□ 0.34
LIG1-214ENST00000597146 ARNTLO00327 626 aa17.15■□□□□ 0.34
LIG1-214ENST00000597146 ASAP2O43150 1006 aa17.15■□□□□ 0.34
LIG1-214ENST00000597146 CPA1P15085 419 aa17.15■□□□□ 0.34
LIG1-214ENST00000597146 PTPN2P17706 415 aa17.15■□□□□ 0.34
LIG1-214ENST00000597146 NCBP1Q09161 790 aaKnown RBP17.15■□□□□ 0.34
LIG1-214ENST00000597146 ZNF252P-AS1Q0IIN9 211 aa17.15■□□□□ 0.34
LIG1-214ENST00000597146 LRRC32Q14392 662 aa17.15■□□□□ 0.34
LIG1-214ENST00000597146 PCBP1Q15365 356 aaKnown RBP eCLIP17.15■□□□□ 0.34
LIG1-214ENST00000597146 PDXDC1Q6P996 788 aa17.15■□□□□ 0.34
LIG1-214ENST00000597146 SLC27A1Q6PCB7 646 aa17.15■□□□□ 0.34
LIG1-214ENST00000597146 LRSAM1Q6UWE0 723 aa17.15■□□□□ 0.34
LIG1-214ENST00000597146 KBTBD6Q86V97 674 aa17.15■□□□□ 0.34
LIG1-214ENST00000597146 ASAP3Q8TDY4 903 aa17.15■□□□□ 0.34
LIG1-214ENST00000597146 MTRQ99707 1265 aa17.15■□□□□ 0.34
LIG1-214ENST00000597146 VAV3Q9UKW4 847 aa17.15■□□□□ 0.34
LIG1-214ENST00000597146 SMG1Q96Q15 3661 aaKnown RBP17.15■□□□□ 0.34
LIG1-214ENST00000597146 IGSF10Q6WRI0 2623 aa17.14■□□□□ 0.33
LIG1-214ENST00000597146 SLC38A8A6NNN8 435 aa17.14■□□□□ 0.33
LIG1-214ENST00000597146 ZBTB39O15060 712 aa17.14■□□□□ 0.33
LIG1-214ENST00000597146 SLC37A4O43826 429 aa17.14■□□□□ 0.33
LIG1-214ENST00000597146 LRG1P02750 347 aa17.14■□□□□ 0.33
LIG1-214ENST00000597146 FGFR3P22607 806 aa17.14■□□□□ 0.33
LIG1-214ENST00000597146 TKTP29401 623 aaKnown RBP17.14■□□□□ 0.33
LIG1-214ENST00000597146 PXNP49023 591 aaPredicted RBP17.14■□□□□ 0.33
LIG1-214ENST00000597146 AKAP17AQ02040 695 aaKnown RBP17.14■□□□□ 0.33
LIG1-214ENST00000597146 ELAVL2Q12926 359 aaKnown RBP17.14■□□□□ 0.33
LIG1-214ENST00000597146 NAB2Q15742 525 aa17.14■□□□□ 0.33
LIG1-214ENST00000597146 XKR9Q5GH70 373 aa17.14■□□□□ 0.33
LIG1-214ENST00000597146 PLA2G2CQ5R387 149 aa17.14■□□□□ 0.33
LIG1-214ENST00000597146 RNF43Q68DV7 783 aa17.14■□□□□ 0.33
LIG1-214ENST00000597146 TXNDC11Q6PKC3 985 aa17.14■□□□□ 0.33
LIG1-214ENST00000597146 IFNLR1Q8IU57 520 aaPredicted RBP17.14■□□□□ 0.33
LIG1-214ENST00000597146 EXOC8Q8IYI6 725 aa17.14■□□□□ 0.33
LIG1-214ENST00000597146 CCDC148Q8NFR7 591 aa17.14■□□□□ 0.33
LIG1-214ENST00000597146 SMARCD2Q92925 531 aa17.14■□□□□ 0.33
LIG1-214ENST00000597146 LXNQ9BS40 222 aa17.14■□□□□ 0.33
LIG1-214ENST00000597146 PPME1Q9Y570 386 aa17.14■□□□□ 0.33
LIG1-214ENST00000597146 NUP205Q92621 2012 aa17.14■□□□□ 0.33
LIG1-214ENST00000597146 FLNBO75369 2602 aaKnown RBP17.14■□□□□ 0.33
LIG1-214ENST00000597146 CYP3A7-CYP3A51PA0A087WV96 503 aa17.13■□□□□ 0.33
LIG1-214ENST00000597146 ARHGEF37A1IGU5 675 aa17.13■□□□□ 0.33
LIG1-214ENST00000597146 ZNF263O14978 683 aa17.13■□□□□ 0.33
LIG1-214ENST00000597146 PRPF3O43395 683 aaKnown RBP17.13■□□□□ 0.33
LIG1-214ENST00000597146 EIF5BO60841 1220 aaKnown RBP17.13■□□□□ 0.33
LIG1-214ENST00000597146 GJA1P17302 382 aa17.13■□□□□ 0.33
LIG1-214ENST00000597146 CYP3A7P24462 503 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms