RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 ACAP3Q96P50 834 aa16.39■□□□□ 0.21
VRK3-207ENST00000594092 STK33Q9BYT3 514 aa16.39■□□□□ 0.21
VRK3-207ENST00000594092 MTMR12Q9C0I1 747 aa16.39■□□□□ 0.21
VRK3-207ENST00000594092 UBE2TQ9NPD8 197 aaPredicted RBP16.39■□□□□ 0.21
VRK3-207ENST00000594092 ARHGAP20Q9P2F6 1191 aa16.39■□□□□ 0.21
VRK3-207ENST00000594092 ST3GAL5Q9UNP4 418 aa16.39■□□□□ 0.21
VRK3-207ENST00000594092 ADGRG1Q9Y653 693 aa16.39■□□□□ 0.21
VRK3-207ENST00000594092 CYLC1P35663 651 aaPredicted RBP16.38■□□□□ 0.21
VRK3-207ENST00000594092 PIK3CAP42336 1068 aa16.38■□□□□ 0.21
VRK3-207ENST00000594092 DRAP1Q14919 205 aaPredicted RBP16.38■□□□□ 0.21
VRK3-207ENST00000594092 DUOXA2Q1HG44 320 aa16.38■□□□□ 0.21
VRK3-207ENST00000594092 FAM26DQ5JW98 314 aa16.38■□□□□ 0.21
VRK3-207ENST00000594092 UBXN11Q5T124 520 aa16.38■□□□□ 0.21
VRK3-207ENST00000594092 HGSNATQ68CP4 663 aa16.38■□□□□ 0.21
VRK3-207ENST00000594092 FBXO46Q6PJ61 603 aaPredicted RBP16.38■□□□□ 0.21
VRK3-207ENST00000594092 CCDC170Q8IYT3 715 aa16.38■□□□□ 0.21
VRK3-207ENST00000594092 NT5C1BQ96P26 610 aa16.38■□□□□ 0.21
VRK3-207ENST00000594092 PI4K2AQ9BTU6 479 aa16.38■□□□□ 0.21
VRK3-207ENST00000594092 CCDC94Q9BW85 323 aaPredicted RBP16.38■□□□□ 0.21
VRK3-207ENST00000594092 OSBPL7Q9BZF2 842 aa16.38■□□□□ 0.21
VRK3-207ENST00000594092 NHEJ1Q9H9Q4 299 aaPredicted RBP16.38■□□□□ 0.21
VRK3-207ENST00000594092 F8VZ95 297 aa16.38■□□□□ 0.21
VRK3-207ENST00000594092 ZC3H11AO75152 810 aaKnown RBP eCLIP16.38■□□□□ 0.21
VRK3-207ENST00000594092 TUBB4AP04350 444 aa16.38■□□□□ 0.21
VRK3-207ENST00000594092 PLEKP08567 350 aaPredicted RBP16.38■□□□□ 0.21
VRK3-207ENST00000594092 CDK7P50613 346 aa16.38■□□□□ 0.21
VRK3-207ENST00000594092 TFAMQ00059 246 aaKnown RBP16.38■□□□□ 0.21
VRK3-207ENST00000594092 ASIC2Q16515 512 aa16.38■□□□□ 0.21
VRK3-207ENST00000594092 TRAPPC11Q7Z392 1133 aa16.38■□□□□ 0.21
VRK3-207ENST00000594092 REXO1L1PQ8IX06 675 aa16.38■□□□□ 0.21
VRK3-207ENST00000594092 HELQQ8TDG4 1101 aa16.38■□□□□ 0.21
VRK3-207ENST00000594092 ELMO3Q96BJ8 720 aa16.38■□□□□ 0.21
VRK3-207ENST00000594092 ZNF333Q96JL9 665 aa16.38■□□□□ 0.21
VRK3-207ENST00000594092 SEZ6LQ9BYH1 1024 aa16.38■□□□□ 0.21
VRK3-207ENST00000594092 TRIM6Q9C030 488 aaPredicted RBP16.38■□□□□ 0.21
VRK3-207ENST00000594092 GPR88Q9GZN0 384 aa16.38■□□□□ 0.21
VRK3-207ENST00000594092 NXF3Q9H4D5 531 aaKnown RBP16.38■□□□□ 0.21
VRK3-207ENST00000594092 ASB7Q9H672 318 aa16.38■□□□□ 0.21
VRK3-207ENST00000594092 AGO3Q9H9G7 860 aaKnown RBP16.38■□□□□ 0.21
VRK3-207ENST00000594092 SNTG2Q9NY99 539 aa16.38■□□□□ 0.21
VRK3-207ENST00000594092 EPN1Q9Y6I3 576 aaPredicted RBP16.38■□□□□ 0.21
VRK3-207ENST00000594092 CAND2O75155 1236 aa16.37■□□□□ 0.21
VRK3-207ENST00000594092 PHACTR2O75167 634 aa16.37■□□□□ 0.21
VRK3-207ENST00000594092 NDUFA10O95299 355 aa16.37■□□□□ 0.21
VRK3-207ENST00000594092 NFICP08651 508 aa16.37■□□□□ 0.21
VRK3-207ENST00000594092 TMEM191BP0C7N4 346 aa16.37■□□□□ 0.21
VRK3-207ENST00000594092 PNMA6AP0CW24 399 aaPredicted RBP16.37■□□□□ 0.21
VRK3-207ENST00000594092 STAT1P42224 750 aa16.37■□□□□ 0.21
VRK3-207ENST00000594092 LBX1P52954 281 aa16.37■□□□□ 0.21
VRK3-207ENST00000594092 NFX1Q12986 1120 aaKnown RBP16.37■□□□□ 0.21
VRK3-207ENST00000594092 ARHGAP44Q17R89 818 aa16.37■□□□□ 0.21
VRK3-207ENST00000594092 FBXO47Q5MNV8 452 aa16.37■□□□□ 0.21
VRK3-207ENST00000594092 ZNF618Q5T7W0 954 aa16.37■□□□□ 0.21
VRK3-207ENST00000594092 SCARA3Q6AZY7 606 aa16.37■□□□□ 0.21
VRK3-207ENST00000594092 JADE1Q6IE81 842 aa16.37■□□□□ 0.21
VRK3-207ENST00000594092 IRF2BP2Q7Z5L9 587 aa16.37■□□□□ 0.21
VRK3-207ENST00000594092 PPM1KQ8N3J5 372 aa16.37■□□□□ 0.21
VRK3-207ENST00000594092 KAT5Q92993 513 aa16.37■□□□□ 0.21
VRK3-207ENST00000594092 TATDN2Q93075 761 aa16.37■□□□□ 0.21
VRK3-207ENST00000594092 ANKRD36BP1Q96IX9 119 aa16.37■□□□□ 0.21
VRK3-207ENST00000594092 HES2Q9Y543 173 aa16.37■□□□□ 0.21
VRK3-207ENST00000594092 SERPING1P05155 500 aa16.36■□□□□ 0.21
VRK3-207ENST00000594092 GHRP10912 638 aa16.36■□□□□ 0.21
VRK3-207ENST00000594092 CKBP12277 381 aa16.36■□□□□ 0.21
VRK3-207ENST00000594092 SOX5P35711 763 aa16.36■□□□□ 0.21
VRK3-207ENST00000594092 ARID5AQ03989 594 aa16.36■□□□□ 0.21
VRK3-207ENST00000594092 NCOA4Q13772 614 aa16.36■□□□□ 0.21
VRK3-207ENST00000594092 TWF2Q6IBS0 349 aaKnown RBP16.36■□□□□ 0.21
VRK3-207ENST00000594092 KREMEN1Q96MU8 473 aa16.36■□□□□ 0.21
VRK3-207ENST00000594092 CRISPLD2Q9H0B8 497 aa16.36■□□□□ 0.21
VRK3-207ENST00000594092 ERVK-5Q9HDB9 667 aa16.36■□□□□ 0.21
VRK3-207ENST00000594092 CITO14578 2027 aa16.36■□□□□ 0.21
VRK3-207ENST00000594092 GPR182O15218 404 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 IPO7O95373 1038 aaKnown RBP16.35■□□□□ 0.21
VRK3-207ENST00000594092 CST3P01034 146 aaPredicted RBP16.35■□□□□ 0.21
VRK3-207ENST00000594092 TNNC2P02585 160 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 EIF4A3P38919 411 aaKnown RBP16.35■□□□□ 0.21
VRK3-207ENST00000594092 MAPK8IP2Q13387 824 aaPredicted RBP16.35■□□□□ 0.21
VRK3-207ENST00000594092 LPIN1Q14693 890 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 TDRD12Q587J7 1177 aaKnown RBP16.35■□□□□ 0.21
VRK3-207ENST00000594092 WDR44Q5JSH3 913 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 CD302Q8IX05 232 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 ACRBPQ8NEB7 543 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 SNX27Q96L92 541 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 CCDC42Q96M95 316 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 PLEKHA5Q9HAU0 1116 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 PADI3Q9ULW8 664 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 SSU72P8A0A1W2PR75 194 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 FOXN3O00409 490 aaPredicted RBP16.35■□□□□ 0.21
VRK3-207ENST00000594092 RECQL4O94761 1208 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 GFPT2O94808 682 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 SGPL1O95470 568 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 CD52P31358 61 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 PRKCIP41743 596 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 MNX1P50219 401 aaPredicted RBP16.35■□□□□ 0.21
VRK3-207ENST00000594092 MFAP3P55082 362 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 KRT83P78385 493 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 KLHL30Q0D2K2 578 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 TMEM132DQ14C87 1099 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 SPOPLQ6IQ16 392 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms