RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 ZACNQ401N2 412 aa14.27□□□□□ -0.13
VRK3-205ENST00000593919 TDRD10Q5VZ19 366 aaKnown RBP14.27□□□□□ -0.13
VRK3-205ENST00000593919 IQCEQ6IPM2 695 aa14.27□□□□□ -0.13
VRK3-205ENST00000593919 PHLDB3Q6NSJ2 640 aa14.27□□□□□ -0.13
VRK3-205ENST00000593919 NOTUMQ6P988 496 aa14.27□□□□□ -0.13
VRK3-205ENST00000593919 RPAINQ86UA6 219 aa14.27□□□□□ -0.13
VRK3-205ENST00000593919 SPAG5Q96R06 1193 aa14.27□□□□□ -0.13
VRK3-205ENST00000593919 NUCKS1Q9H1E3 243 aaKnown RBP14.27□□□□□ -0.13
VRK3-205ENST00000593919 STARD7Q9NQZ5 370 aa14.27□□□□□ -0.13
VRK3-205ENST00000593919 PIN4Q9Y237 131 aaKnown RBP14.27□□□□□ -0.13
VRK3-205ENST00000593919 TRPV2Q9Y5S1 764 aa14.27□□□□□ -0.13
VRK3-205ENST00000593919 KIAA0100Q14667 2235 aaKnown RBP14.26□□□□□ -0.13
VRK3-205ENST00000593919 CHRNA1P02708 482 aa14.26□□□□□ -0.13
VRK3-205ENST00000593919 C4BPAP04003 597 aaKnown RBP14.26□□□□□ -0.13
VRK3-205ENST00000593919 RPLP2P05387 115 aaKnown RBP14.26□□□□□ -0.13
VRK3-205ENST00000593919 CLTAP09496 248 aa14.26□□□□□ -0.13
VRK3-205ENST00000593919 PTPN11Q06124 597 aaPredicted RBP14.26□□□□□ -0.13
VRK3-205ENST00000593919 DCAF4L1Q3SXM0 396 aa14.26□□□□□ -0.13
VRK3-205ENST00000593919 SLC27A1Q6PCB7 646 aa14.26□□□□□ -0.13
VRK3-205ENST00000593919 WDR49Q8IV35 697 aa14.26□□□□□ -0.13
VRK3-205ENST00000593919 OR5B17Q8NGF7 314 aa14.26□□□□□ -0.13
VRK3-205ENST00000593919 DEFB118Q96PH6 123 aa14.26□□□□□ -0.13
VRK3-205ENST00000593919 SENP6Q9GZR1 1112 aaPredicted RBP14.26□□□□□ -0.13
VRK3-205ENST00000593919 RPF1Q9H9Y2 349 aaKnown RBP14.26□□□□□ -0.13
VRK3-205ENST00000593919 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.26□□□□□ -0.135e-6■■■■■ 65.2
VRK3-205ENST00000593919 RAB20Q9NX57 234 aa14.26□□□□□ -0.13
VRK3-205ENST00000593919 TRIM10Q9UDY6 481 aa14.26□□□□□ -0.13
VRK3-205ENST00000593919 PHF24Q9UPV7 400 aa14.26□□□□□ -0.13
VRK3-205ENST00000593919 NOD1Q9Y239 953 aa14.26□□□□□ -0.13
VRK3-205ENST00000593919 PDCD11Q14690 1871 aaKnown RBP14.26□□□□□ -0.13
VRK3-205ENST00000593919 EFCAB8A8MWE9 144 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 MEFVO15553 781 aaPredicted RBP14.25□□□□□ -0.13
VRK3-205ENST00000593919 NPTXRO95502 500 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 PLEKP08567 350 aaPredicted RBP14.25□□□□□ -0.13
VRK3-205ENST00000593919 CCL5P13501 91 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 AXLP30530 894 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 THPOP40225 353 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 JAM2P57087 298 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 MGAT3Q09327 533 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 BIRC3Q13489 604 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 SFMBT2Q5VUG0 894 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 FAM228AQ86W67 206 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 ARHGEF19Q8IW93 802 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 EFCAB13Q8IY85 973 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 DHX38Q92620 1227 aaKnown RBP14.25□□□□□ -0.13
VRK3-205ENST00000593919 SYN2Q92777 582 aaPredicted RBP14.25□□□□□ -0.13
VRK3-205ENST00000593919 EIF2AQ9BY44 585 aaKnown RBP14.25□□□□□ -0.13
VRK3-205ENST00000593919 MTMR12Q9C0I1 747 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 RNF208Q9H0X6 261 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 DNAJC12Q9UKB3 198 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 GUCA1BQ9UMX6 200 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 NOC2LQ9Y3T9 749 aaKnown RBP14.25□□□□□ -0.13
VRK3-205ENST00000593919 A0A0U1RQG5 324 aaPredicted RBP14.25□□□□□ -0.13
VRK3-205ENST00000593919 CTAGE9A4FU28 777 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 DNM1LO00429 736 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 B4GALT4O60513 344 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 RFX1P22670 979 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 CYLC1P35663 651 aaPredicted RBP14.25□□□□□ -0.13
VRK3-205ENST00000593919 CBX1P83916 185 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 CDK17Q00537 523 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 PTK7Q13308 1070 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 SURF1Q15526 300 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 KYAT1Q16773 422 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 TEX35Q5T0J7 233 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 SLC43A3Q8NBI5 491 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 NHEJ1Q9H9Q4 299 aaPredicted RBP14.25□□□□□ -0.13
VRK3-205ENST00000593919 ARHGAP20Q9P2F6 1191 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 MYO6Q9UM54 1294 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 TFR2Q9UP52 801 aa14.25□□□□□ -0.13
VRK3-205ENST00000593919 F8VZ95 297 aa14.24□□□□□ -0.13
VRK3-205ENST00000593919 IL18RAPO95256 599 aa14.24□□□□□ -0.13
VRK3-205ENST00000593919 VNN1O95497 513 aa14.24□□□□□ -0.13
VRK3-205ENST00000593919 HLA-DRAP01903 254 aa14.24□□□□□ -0.13
VRK3-205ENST00000593919 PNMA6AP0CW24 399 aaPredicted RBP14.24□□□□□ -0.13
VRK3-205ENST00000593919 PIK3CAP42336 1068 aa14.24□□□□□ -0.13
VRK3-205ENST00000593919 ARID5AQ03989 594 aa14.24□□□□□ -0.13
VRK3-205ENST00000593919 DRAP1Q14919 205 aaPredicted RBP14.24□□□□□ -0.13
VRK3-205ENST00000593919 SLC10A6Q3KNW5 377 aa14.24□□□□□ -0.13
VRK3-205ENST00000593919 HGSNATQ68CP4 663 aa14.24□□□□□ -0.13
VRK3-205ENST00000593919 KIAA1328Q86T90 577 aa14.24□□□□□ -0.13
VRK3-205ENST00000593919 ELMO3Q96BJ8 720 aa14.24□□□□□ -0.13
VRK3-205ENST00000593919 PI4K2AQ9BTU6 479 aa14.24□□□□□ -0.13
VRK3-205ENST00000593919 STK33Q9BYT3 514 aa14.24□□□□□ -0.13
VRK3-205ENST00000593919 GPR88Q9GZN0 384 aa14.24□□□□□ -0.13
VRK3-205ENST00000593919 UBE2TQ9NPD8 197 aaPredicted RBP14.24□□□□□ -0.13
VRK3-205ENST00000593919 AIPL1Q9NZN9 384 aa14.24□□□□□ -0.13
VRK3-205ENST00000593919 DAAM1Q9Y4D1 1078 aa14.24□□□□□ -0.13
VRK3-205ENST00000593919 MROH7Q68CQ1 1323 aa14.24□□□□□ -0.13
VRK3-205ENST00000593919 LACTBL1A8MY62 500 aa14.23□□□□□ -0.13
VRK3-205ENST00000593919 RPS6KA5O75582 802 aa14.23□□□□□ -0.13
VRK3-205ENST00000593919 GRM5P41594 1212 aa14.23□□□□□ -0.13
VRK3-205ENST00000593919 AP3M2P53677 418 aa14.23□□□□□ -0.13
VRK3-205ENST00000593919 TFAMQ00059 246 aaKnown RBP14.23□□□□□ -0.13
VRK3-205ENST00000593919 POU5F1Q01860 360 aaKnown RBP14.23□□□□□ -0.13
VRK3-205ENST00000593919 ARHGAP44Q17R89 818 aa14.23□□□□□ -0.13
VRK3-205ENST00000593919 TRIM71Q2Q1W2 868 aaKnown RBP14.23□□□□□ -0.13
VRK3-205ENST00000593919 APBB1IPQ7Z5R6 666 aaPredicted RBP14.23□□□□□ -0.13
VRK3-205ENST00000593919 PPM1KQ8N3J5 372 aa14.23□□□□□ -0.13
VRK3-205ENST00000593919 KAT5Q92993 513 aa14.23□□□□□ -0.13
VRK3-205ENST00000593919 ACAP3Q96P50 834 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms