RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 ZBTB41Q5SVQ8 909 aa20.19■□□□□ 0.82
SHKBP1-202ENST00000593764 FAM171A1Q5VUB5 890 aa20.19■□□□□ 0.82
SHKBP1-202ENST00000593764 C3orf58Q8NDZ4 430 aa20.19■□□□□ 0.82
SHKBP1-202ENST00000593764 RIN2Q8WYP3 895 aaPredicted RBP20.19■□□□□ 0.82
SHKBP1-202ENST00000593764 FBXL18Q96ME1 805 aa20.19■□□□□ 0.82
SHKBP1-202ENST00000593764 UROC1Q96N76 676 aa20.19■□□□□ 0.82
SHKBP1-202ENST00000593764 PHF7Q9BWX1 381 aaPredicted RBP20.19■□□□□ 0.82
SHKBP1-202ENST00000593764 EPHX3Q9H6B9 360 aa20.19■□□□□ 0.82
SHKBP1-202ENST00000593764 DZANK1Q9NVP4 752 aa20.19■□□□□ 0.82
SHKBP1-202ENST00000593764 KBTBD4Q9NVX7 518 aa20.19■□□□□ 0.82
SHKBP1-202ENST00000593764 SEL1LQ9UBV2 794 aa20.19■□□□□ 0.82
SHKBP1-202ENST00000593764 CFAP45Q9UL16 551 aa20.19■□□□□ 0.82
SHKBP1-202ENST00000593764 TRIOO75962 3097 aa20.19■□□□□ 0.82
SHKBP1-202ENST00000593764 TTC26A0AVF1 554 aa20.18■□□□□ 0.82
SHKBP1-202ENST00000593764 LOC730098B7Z3J9 87 aa20.18■□□□□ 0.82
SHKBP1-202ENST00000593764 B3GAT3O94766 335 aa20.18■□□□□ 0.82
SHKBP1-202ENST00000593764 ADH1AP07327 375 aa20.18■□□□□ 0.82
SHKBP1-202ENST00000593764 CXCL8P10145 99 aa20.18■□□□□ 0.82
SHKBP1-202ENST00000593764 GAP43P17677 238 aa20.18■□□□□ 0.82
SHKBP1-202ENST00000593764 ABCD1P33897 745 aa20.18■□□□□ 0.82
SHKBP1-202ENST00000593764 MATR3P43243 847 aaKnown RBP eCLIP20.18■□□□□ 0.82
SHKBP1-202ENST00000593764 ITIH3Q06033 890 aa20.18■□□□□ 0.82
SHKBP1-202ENST00000593764 STAMQ92783 540 aa20.18■□□□□ 0.82
SHKBP1-202ENST00000593764 C18orf25Q96B23 403 aaPredicted RBP20.18■□□□□ 0.82
SHKBP1-202ENST00000593764 POP1Q99575 1024 aaKnown RBP20.18■□□□□ 0.82
SHKBP1-202ENST00000593764 TTPALQ9BTX7 342 aa20.18■□□□□ 0.82
SHKBP1-202ENST00000593764 IKZF4Q9H2S9 585 aa20.18■□□□□ 0.82
SHKBP1-202ENST00000593764 SLC38A7Q9NVC3 462 aa20.18■□□□□ 0.82
SHKBP1-202ENST00000593764 FNIP2Q9P278 1114 aa20.18■□□□□ 0.82
SHKBP1-202ENST00000593764 TISP43B9A030 160 aa20.17■□□□□ 0.82
SHKBP1-202ENST00000593764 PI4K2BG5E9Z4 385 aa20.17■□□□□ 0.82
SHKBP1-202ENST00000593764 OGTO15294 1046 aa20.17■□□□□ 0.82
SHKBP1-202ENST00000593764 ADRB2P07550 413 aa20.17■□□□□ 0.82
SHKBP1-202ENST00000593764 RPL17P18621 184 aaKnown RBP20.17■□□□□ 0.82
SHKBP1-202ENST00000593764 KCNA1Q09470 495 aa20.17■□□□□ 0.82
SHKBP1-202ENST00000593764 RARS2Q5T160 578 aaKnown RBP20.17■□□□□ 0.82
SHKBP1-202ENST00000593764 PRSS55Q6UWB4 352 aaPredicted RBP20.17■□□□□ 0.82
SHKBP1-202ENST00000593764 LNX1Q8TBB1 728 aaPredicted RBP20.17■□□□□ 0.82
SHKBP1-202ENST00000593764 PIK3R5Q8WYR1 880 aa20.17■□□□□ 0.82
SHKBP1-202ENST00000593764 DDX27Q96GQ7 796 aaKnown RBP20.17■□□□□ 0.82
SHKBP1-202ENST00000593764 CHAMP1Q96JM3 812 aa20.17■□□□□ 0.82
SHKBP1-202ENST00000593764 MRPL44Q9H9J2 332 aaKnown RBP20.17■□□□□ 0.82
SHKBP1-202ENST00000593764 PLEKHA5Q9HAU0 1116 aa20.17■□□□□ 0.82
SHKBP1-202ENST00000593764 OLFML3Q9NRN5 406 aa20.17■□□□□ 0.82
SHKBP1-202ENST00000593764 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.17■□□□□ 0.82
SHKBP1-202ENST00000593764 TBC1D7Q9P0N9 293 aa20.17■□□□□ 0.82
SHKBP1-202ENST00000593764 STYXL1Q9Y6J8 313 aa20.17■□□□□ 0.82
SHKBP1-202ENST00000593764 WEE2P0C1S8 567 aa20.16■□□□□ 0.82
SHKBP1-202ENST00000593764 IDEP14735 1019 aa20.16■□□□□ 0.82
SHKBP1-202ENST00000593764 FGFR3P22607 806 aa20.16■□□□□ 0.82
SHKBP1-202ENST00000593764 ME1P48163 572 aa20.16■□□□□ 0.82
SHKBP1-202ENST00000593764 CASP5P51878 434 aa20.16■□□□□ 0.82
SHKBP1-202ENST00000593764 ELAVL2Q12926 359 aaKnown RBP20.16■□□□□ 0.82
SHKBP1-202ENST00000593764 ZBTB6Q15916 424 aa20.16■□□□□ 0.82
SHKBP1-202ENST00000593764 ENOX2Q16206 610 aaKnown RBP20.16■□□□□ 0.82
SHKBP1-202ENST00000593764 KYAT1Q16773 422 aa20.16■□□□□ 0.82
SHKBP1-202ENST00000593764 HERC4Q5GLZ8 1057 aaPredicted RBP20.16■□□□□ 0.82
SHKBP1-202ENST00000593764 RESP18Q5W5W9 173 aa20.16■□□□□ 0.82
SHKBP1-202ENST00000593764 CES5AQ6NT32 575 aa20.16■□□□□ 0.82
SHKBP1-202ENST00000593764 LILRA6Q6PI73 481 aa20.16■□□□□ 0.82
SHKBP1-202ENST00000593764 CEP57Q86XR8 500 aa20.16■□□□□ 0.82
SHKBP1-202ENST00000593764 TMEM130Q8N3G9 435 aa20.16■□□□□ 0.82
SHKBP1-202ENST00000593764 DHX58Q96C10 678 aa20.16■□□□□ 0.82
SHKBP1-202ENST00000593764 HVCN1Q96D96 273 aa20.16■□□□□ 0.82
SHKBP1-202ENST00000593764 CLSTN3Q9BQT9 956 aa20.16■□□□□ 0.82
SHKBP1-202ENST00000593764 FGFBP2Q9BYJ0 223 aa20.16■□□□□ 0.82
SHKBP1-202ENST00000593764 TNMDQ9H2S6 317 aa20.16■□□□□ 0.82
SHKBP1-202ENST00000593764 CUEDC2Q9H467 287 aa20.16■□□□□ 0.82
SHKBP1-202ENST00000593764 PANK4Q9NVE7 773 aa20.16■□□□□ 0.82
SHKBP1-202ENST00000593764 VWA8A3KMH1 1905 aa20.15■□□□□ 0.82
SHKBP1-202ENST00000593764 LACTBL1A8MY62 500 aa20.15■□□□□ 0.82
SHKBP1-202ENST00000593764 PODXLO00592 558 aa20.15■□□□□ 0.82
SHKBP1-202ENST00000593764 GLUD1P00367 558 aa20.15■□□□□ 0.82
SHKBP1-202ENST00000593764 C1RP00736 705 aa20.15■□□□□ 0.82
SHKBP1-202ENST00000593764 ADSSP30520 456 aa20.15■□□□□ 0.82
SHKBP1-202ENST00000593764 RPL9P32969 192 aaKnown RBP20.15■□□□□ 0.82
SHKBP1-202ENST00000593764 SPAG1Q07617 926 aa20.15■□□□□ 0.82
SHKBP1-202ENST00000593764 TMC5Q6UXY8 1006 aa20.15■□□□□ 0.82
SHKBP1-202ENST00000593764 PALB2Q86YC2 1186 aa20.15■□□□□ 0.82
SHKBP1-202ENST00000593764 IQUBQ8NA54 791 aa20.15■□□□□ 0.82
SHKBP1-202ENST00000593764 MSTO1Q9BUK6 570 aa20.15■□□□□ 0.82
SHKBP1-202ENST00000593764 TRIM9Q9C026 710 aa20.15■□□□□ 0.82
SHKBP1-202ENST00000593764 POMKQ9H5K3 350 aa20.15■□□□□ 0.82
SHKBP1-202ENST00000593764 MAN1C1Q9NR34 630 aa20.15■□□□□ 0.82
SHKBP1-202ENST00000593764 CPSF3Q9UKF6 684 aaKnown RBP20.15■□□□□ 0.82
SHKBP1-202ENST00000593764 PLXNA3P51805 1871 aa20.14■□□□□ 0.81
SHKBP1-202ENST00000593764 I3L4J1 428 aa20.14■□□□□ 0.81
SHKBP1-202ENST00000593764 POLR2DO15514 142 aaKnown RBP20.14■□□□□ 0.81
SHKBP1-202ENST00000593764 TGM5O43548 720 aa20.14■□□□□ 0.81
SHKBP1-202ENST00000593764 SPATA31D3P0C874 917 aa20.14■□□□□ 0.81
SHKBP1-202ENST00000593764 MYBP10242 640 aa20.14■□□□□ 0.81
SHKBP1-202ENST00000593764 BRCC3P46736 316 aa20.14■□□□□ 0.81
SHKBP1-202ENST00000593764 CREMQ03060 361 aa20.14■□□□□ 0.81
SHKBP1-202ENST00000593764 L1TD1Q5T7N2 865 aaKnown RBP20.14■□□□□ 0.81
SHKBP1-202ENST00000593764 CNNM4Q6P4Q7 775 aa20.14■□□□□ 0.81
SHKBP1-202ENST00000593764 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.14■□□□□ 0.81
SHKBP1-202ENST00000593764 SPATA31D4Q6ZUB0 917 aa20.14■□□□□ 0.81
SHKBP1-202ENST00000593764 RNF135Q8IUD6 432 aa20.14■□□□□ 0.81
SHKBP1-202ENST00000593764 GLYCTKQ8IVS8 523 aa20.14■□□□□ 0.81
SHKBP1-202ENST00000593764 RPGRIP1Q96KN7 1286 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms