RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 DCAF4L1Q3SXM0 396 aa11.74□□□□□ -0.53
USE1-203ENST00000593597 XKR4Q5GH76 650 aa11.74□□□□□ -0.53
USE1-203ENST00000593597 SPECC1Q5M775 1068 aa11.74□□□□□ -0.53
USE1-203ENST00000593597 PHLDB3Q6NSJ2 640 aa11.74□□□□□ -0.53
USE1-203ENST00000593597 ALKAL1Q6UXT8 129 aa11.74□□□□□ -0.53
USE1-203ENST00000593597 NPAS3Q8IXF0 933 aa11.74□□□□□ -0.53
USE1-203ENST00000593597 ADSSL1Q8N142 457 aa11.74□□□□□ -0.53
USE1-203ENST00000593597 IGSF22Q8N9C0 903 aa11.74□□□□□ -0.53
USE1-203ENST00000593597 FGF13Q92913 245 aa11.74□□□□□ -0.53
USE1-203ENST00000593597 NKD2Q969F2 451 aaPredicted RBP11.74□□□□□ -0.53
USE1-203ENST00000593597 NXPE3Q969Y0 559 aa11.74□□□□□ -0.53
USE1-203ENST00000593597 RUSC1Q9BVN2 902 aa11.74□□□□□ -0.53
USE1-203ENST00000593597 DDX19AQ9NUU7 478 aaKnown RBP11.74□□□□□ -0.53
USE1-203ENST00000593597 PPP4R2Q9NY27 417 aa11.74□□□□□ -0.53
USE1-203ENST00000593597 CDH7Q9ULB5 785 aa11.74□□□□□ -0.53
USE1-203ENST00000593597 LIMCH1Q9UPQ0 1083 aa11.74□□□□□ -0.53
USE1-203ENST00000593597 KIAA1024Q9UPX6 916 aa11.74□□□□□ -0.53
USE1-203ENST00000593597 PCDHB6Q9Y5E3 794 aa11.74□□□□□ -0.53
USE1-203ENST00000593597 R4GN57 208 aa11.74□□□□□ -0.53
USE1-203ENST00000593597 SMIM28A0A1B0GU29 152 aa11.73□□□□□ -0.53
USE1-203ENST00000593597 TBC1D4O60343 1298 aa11.73□□□□□ -0.53
USE1-203ENST00000593597 POU2F2P09086 479 aa11.73□□□□□ -0.53
USE1-203ENST00000593597 MUTP22033 750 aa11.73□□□□□ -0.53
USE1-203ENST00000593597 PROZP22891 400 aa11.73□□□□□ -0.53
USE1-203ENST00000593597 CDC25AP30304 524 aa11.73□□□□□ -0.53
USE1-203ENST00000593597 NPTX2P47972 431 aa11.73□□□□□ -0.53
USE1-203ENST00000593597 RBM25P49756 843 aaKnown RBP11.73□□□□□ -0.53
USE1-203ENST00000593597 PPM1LQ5SGD2 360 aa11.73□□□□□ -0.53
USE1-203ENST00000593597 AXDND1Q5T1B0 1012 aaPredicted RBP11.73□□□□□ -0.53
USE1-203ENST00000593597 ELMSAN1Q6PJG2 1045 aa11.73□□□□□ -0.53
USE1-203ENST00000593597 DCLRE1AQ6PJP8 1040 aa11.73□□□□□ -0.53
USE1-203ENST00000593597 PHLPP2Q6ZVD8 1323 aa11.73□□□□□ -0.53
USE1-203ENST00000593597 PJA1Q8NG27 643 aa11.73□□□□□ -0.53
USE1-203ENST00000593597 ERMNQ8TAM6 284 aa11.73□□□□□ -0.53
USE1-203ENST00000593597 SNX29Q8TEQ0 813 aa11.73□□□□□ -0.53
USE1-203ENST00000593597 ING5Q8WYH8 240 aa11.73□□□□□ -0.53
USE1-203ENST00000593597 ACO2Q99798 780 aaKnown RBP11.73□□□□□ -0.53
USE1-203ENST00000593597 LLPHQ9BRT6 129 aaKnown RBP11.73□□□□□ -0.53
USE1-203ENST00000593597 DDX23Q9BUQ8 820 aaKnown RBP11.73□□□□□ -0.53
USE1-203ENST00000593597 PLA2G2FQ9BZM2 168 aa11.73□□□□□ -0.53
USE1-203ENST00000593597 ARHGAP28Q9P2N2 729 aa11.73□□□□□ -0.53
USE1-203ENST00000593597 TNFSF13BQ9Y275 285 aa11.73□□□□□ -0.53
USE1-203ENST00000593597 MTF2Q9Y483 593 aaPredicted RBP11.73□□□□□ -0.53
USE1-203ENST00000593597 CDY1Q9Y6F8 540 aa11.73□□□□□ -0.53
USE1-203ENST00000593597 NCANO14594 1321 aa11.72□□□□□ -0.53
USE1-203ENST00000593597 WDR27A2RRH5 827 aa11.72□□□□□ -0.53
USE1-203ENST00000593597 HIP1RO75146 1068 aa11.72□□□□□ -0.53
USE1-203ENST00000593597 B3GAT3O94766 335 aa11.72□□□□□ -0.53
USE1-203ENST00000593597 U2AF2P26368 475 aaKnown RBP eCLIP11.72□□□□□ -0.53
USE1-203ENST00000593597 GRM5P41594 1212 aa11.72□□□□□ -0.53
USE1-203ENST00000593597 PEX3P56589 373 aa11.72□□□□□ -0.53
USE1-203ENST00000593597 STARD6P59095 220 aa11.72□□□□□ -0.53
USE1-203ENST00000593597 OSTNP61366 133 aa11.72□□□□□ -0.53
USE1-203ENST00000593597 PTGDRQ13258 359 aa11.72□□□□□ -0.53
USE1-203ENST00000593597 PPP2R5AQ15172 486 aa11.72□□□□□ -0.53
USE1-203ENST00000593597 SAFBQ15424 915 aaKnown RBP eCLIP11.72□□□□□ -0.53
USE1-203ENST00000593597 TMEM132AQ24JP5 1023 aa11.72□□□□□ -0.53
USE1-203ENST00000593597 LIN9Q5TKA1 542 aa11.72□□□□□ -0.53
USE1-203ENST00000593597 HAUS3Q68CZ6 603 aa11.72□□□□□ -0.53
USE1-203ENST00000593597 C1orf186Q6ZWK4 172 aa11.72□□□□□ -0.53
USE1-203ENST00000593597 LRRC15Q8TF66 581 aa11.72□□□□□ -0.53
USE1-203ENST00000593597 KIFAP3Q92845 792 aa11.72□□□□□ -0.53
USE1-203ENST00000593597 C18orf25Q96B23 403 aaPredicted RBP11.72□□□□□ -0.53
USE1-203ENST00000593597 ZBTB45Q96K62 511 aaPredicted RBP11.72□□□□□ -0.53
USE1-203ENST00000593597 PNMA5Q96PV4 448 aa11.72□□□□□ -0.53
USE1-203ENST00000593597 KXD1Q9BQD3 176 aa11.72□□□□□ -0.53
USE1-203ENST00000593597 ADPGKQ9BRR6 497 aa11.72□□□□□ -0.53
USE1-203ENST00000593597 TARS2Q9BW92 718 aaKnown RBP11.72□□□□□ -0.53
USE1-203ENST00000593597 HAPLN2Q9GZV7 340 aa11.72□□□□□ -0.53
USE1-203ENST00000593597 LRWD1Q9UFC0 647 aa11.72□□□□□ -0.53
USE1-203ENST00000593597 BACE2Q9Y5Z0 518 aa11.72□□□□□ -0.53
USE1-203ENST00000593597 KIF26AQ9ULI4 1882 aaPredicted RBP11.72□□□□□ -0.53
USE1-203ENST00000593597 STK25O00506 426 aa11.71□□□□□ -0.53
USE1-203ENST00000593597 SEC24AO95486 1093 aa11.71□□□□□ -0.53
USE1-203ENST00000593597 SP9P0CG40 484 aa11.71□□□□□ -0.53
USE1-203ENST00000593597 CEBPBP17676 345 aa11.71□□□□□ -0.53
USE1-203ENST00000593597 FCARP24071 287 aa11.71□□□□□ -0.53
USE1-203ENST00000593597 TRAPPC10P48553 1259 aa11.71□□□□□ -0.53
USE1-203ENST00000593597 EFNA5P52803 228 aa11.71□□□□□ -0.53
USE1-203ENST00000593597 ROR1Q01973 937 aa11.71□□□□□ -0.53
USE1-203ENST00000593597 ELAVL2Q12926 359 aaKnown RBP11.71□□□□□ -0.53
USE1-203ENST00000593597 SNW1Q13573 536 aaKnown RBP11.71□□□□□ -0.53
USE1-203ENST00000593597 ZNF568Q3ZCX4 644 aa11.71□□□□□ -0.53
USE1-203ENST00000593597 SLC8B1Q6J4K2 584 aa11.71□□□□□ -0.53
USE1-203ENST00000593597 RINT1Q6NUQ1 792 aa11.71□□□□□ -0.53
USE1-203ENST00000593597 IFT74Q96LB3 600 aa11.71□□□□□ -0.53
USE1-203ENST00000593597 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.71□□□□□ -0.53
USE1-203ENST00000593597 POLIQ9UNA4 740 aa11.71□□□□□ -0.53
USE1-203ENST00000593597 ZFP37Q9Y6Q3 630 aaPredicted RBP11.71□□□□□ -0.53
USE1-203ENST00000593597 NUP210Q8TEM1 1887 aaPredicted RBP11.71□□□□□ -0.53
USE1-203ENST00000593597 OBSL1O75147 1896 aa11.7□□□□□ -0.54
USE1-203ENST00000593597 F5P12259 2224 aa11.7□□□□□ -0.54
USE1-203ENST00000593597 ARHGEF37A1IGU5 675 aa11.7□□□□□ -0.54
USE1-203ENST00000593597 K7ERI5 159 aa11.7□□□□□ -0.54
USE1-203ENST00000593597 PODXLO00592 558 aa11.7□□□□□ -0.54
USE1-203ENST00000593597 ABLIM3O94929 683 aa11.7□□□□□ -0.54
USE1-203ENST00000593597 RHOP08100 348 aa11.7□□□□□ -0.54
USE1-203ENST00000593597 KCNE1P15382 129 aa11.7□□□□□ -0.54
USE1-203ENST00000593597 CD72P21854 359 aa11.7□□□□□ -0.54
USE1-203ENST00000593597 CCR2P41597 374 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms