RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 KCNG4Q8TDN1 519 aa17.98■□□□□ 0.47
LIG1-205ENST00000593425 ING5Q8WYH8 240 aa17.98■□□□□ 0.47
LIG1-205ENST00000593425 KIFAP3Q92845 792 aa17.98■□□□□ 0.47
LIG1-205ENST00000593425 KXD1Q9BQD3 176 aa17.98■□□□□ 0.47
LIG1-205ENST00000593425 CDT1Q9H211 546 aa17.98■□□□□ 0.47
LIG1-205ENST00000593425 KIAA1024Q9UPX6 916 aa17.98■□□□□ 0.47
LIG1-205ENST00000593425 TNFSF13BQ9Y275 285 aa17.98■□□□□ 0.47
LIG1-205ENST00000593425 PHLPP2Q6ZVD8 1323 aa17.98■□□□□ 0.47
LIG1-205ENST00000593425 PDCD11Q14690 1871 aaKnown RBP17.97■□□□□ 0.47
LIG1-205ENST00000593425 SMIM28A0A1B0GU29 152 aa17.97■□□□□ 0.47
LIG1-205ENST00000593425 OSTNP61366 133 aa17.97■□□□□ 0.47
LIG1-205ENST00000593425 FOXK2Q01167 660 aa17.97■□□□□ 0.47
LIG1-205ENST00000593425 MLF2Q15773 248 aaPredicted RBP17.97■□□□□ 0.47
LIG1-205ENST00000593425 PABPC1LQ4VXU2 614 aaKnown RBP17.97■□□□□ 0.47
LIG1-205ENST00000593425 POTEHQ6S545 545 aa17.97■□□□□ 0.47
LIG1-205ENST00000593425 MAML2Q8IZL2 1156 aaPredicted RBP17.97■□□□□ 0.47
LIG1-205ENST00000593425 FBXO18Q8NFZ0 1043 aa17.97■□□□□ 0.47
LIG1-205ENST00000593425 UROC1Q96N76 676 aa17.97■□□□□ 0.47
LIG1-205ENST00000593425 DDX23Q9BUQ8 820 aaKnown RBP17.97■□□□□ 0.47
LIG1-205ENST00000593425 SEMA4AQ9H3S1 761 aa17.97■□□□□ 0.47
LIG1-205ENST00000593425 DDX19AQ9NUU7 478 aaKnown RBP17.97■□□□□ 0.47
LIG1-205ENST00000593425 LRWD1Q9UFC0 647 aa17.97■□□□□ 0.47
LIG1-205ENST00000593425 LIMCH1Q9UPQ0 1083 aa17.97■□□□□ 0.47
LIG1-205ENST00000593425 BACE2Q9Y5Z0 518 aa17.97■□□□□ 0.47
LIG1-205ENST00000593425 PTPRZ1P23471 2315 aaPredicted RBP17.97■□□□□ 0.47
LIG1-205ENST00000593425 KANSL1LA0AUZ9 987 aa17.96■□□□□ 0.47
LIG1-205ENST00000593425 K7ERI5 159 aa17.96■□□□□ 0.47
LIG1-205ENST00000593425 NEFLP07196 543 aa17.96■□□□□ 0.47
LIG1-205ENST00000593425 GRM5P41594 1212 aa17.96■□□□□ 0.47
LIG1-205ENST00000593425 PEX3P56589 373 aa17.96■□□□□ 0.47
LIG1-205ENST00000593425 SLC5A9Q2M3M2 681 aa17.96■□□□□ 0.47
LIG1-205ENST00000593425 XKR4Q5GH76 650 aa17.96■□□□□ 0.47
LIG1-205ENST00000593425 TAS1R3Q7RTX0 852 aa17.96■□□□□ 0.47
LIG1-205ENST00000593425 DAW1Q8N136 415 aa17.96■□□□□ 0.47
LIG1-205ENST00000593425 SNX29Q8TEQ0 813 aa17.96■□□□□ 0.47
LIG1-205ENST00000593425 SHDQ96IW2 340 aa17.96■□□□□ 0.47
LIG1-205ENST00000593425 ZMAT2Q96NC0 199 aaKnown RBP17.96■□□□□ 0.47
LIG1-205ENST00000593425 ACO2Q99798 780 aaKnown RBP17.96■□□□□ 0.47
LIG1-205ENST00000593425 PTPRHQ9HD43 1115 aa17.96■□□□□ 0.47
LIG1-205ENST00000593425 MTF2Q9Y483 593 aaPredicted RBP17.96■□□□□ 0.47
LIG1-205ENST00000593425 DCHS1Q96JQ0 3298 aa17.96■□□□□ 0.47
LIG1-205ENST00000593425 CITO14578 2027 aa17.96■□□□□ 0.47
LIG1-205ENST00000593425 RIF1Q5UIP0 2472 aaKnown RBP17.95■□□□□ 0.46
LIG1-205ENST00000593425 CCDC169A6NNP5 214 aa17.95■□□□□ 0.46
LIG1-205ENST00000593425 PP2D1A8MPX8 630 aa17.95■□□□□ 0.46
LIG1-205ENST00000593425 E9PMD0 336 aa17.95■□□□□ 0.46
LIG1-205ENST00000593425 RHOP08100 348 aa17.95■□□□□ 0.46
LIG1-205ENST00000593425 NPTX2P47972 431 aa17.95■□□□□ 0.46
LIG1-205ENST00000593425 TRAPPC10P48553 1259 aa17.95■□□□□ 0.46
LIG1-205ENST00000593425 ROR1Q01973 937 aa17.95■□□□□ 0.46
LIG1-205ENST00000593425 ZNF568Q3ZCX4 644 aa17.95■□□□□ 0.46
LIG1-205ENST00000593425 SLC44A4Q53GD3 710 aa17.95■□□□□ 0.46
LIG1-205ENST00000593425 ALKAL1Q6UXT8 129 aa17.95■□□□□ 0.46
LIG1-205ENST00000593425 ANKS3Q6ZW76 656 aa17.95■□□□□ 0.46
LIG1-205ENST00000593425 IGSF22Q8N9C0 903 aa17.95■□□□□ 0.46
LIG1-205ENST00000593425 MCRS1Q96EZ8 462 aa17.95■□□□□ 0.46
LIG1-205ENST00000593425 LLPHQ9BRT6 129 aaKnown RBP17.95■□□□□ 0.46
LIG1-205ENST00000593425 CCDC94Q9BW85 323 aaPredicted RBP17.95■□□□□ 0.46
LIG1-205ENST00000593425 TARS2Q9BW92 718 aaKnown RBP17.95■□□□□ 0.46
LIG1-205ENST00000593425 KCNH3Q9ULD8 1083 aa17.95■□□□□ 0.46
LIG1-205ENST00000593425 MRPS23Q9Y3D9 190 aaKnown RBP17.95■□□□□ 0.46
LIG1-205ENST00000593425 WDR27A2RRH5 827 aa17.94■□□□□ 0.46
LIG1-205ENST00000593425 ABLIM1O14639 778 aa17.94■□□□□ 0.46
LIG1-205ENST00000593425 TRAPPC3O43617 180 aa17.94■□□□□ 0.46
LIG1-205ENST00000593425 HIP1RO75146 1068 aa17.94■□□□□ 0.46
LIG1-205ENST00000593425 CD72P21854 359 aa17.94■□□□□ 0.46
LIG1-205ENST00000593425 TOB1P50616 345 aaPredicted RBP17.94■□□□□ 0.46
LIG1-205ENST00000593425 YARSP54577 528 aaKnown RBP17.94■□□□□ 0.46
LIG1-205ENST00000593425 PRKCQQ04759 706 aa17.94■□□□□ 0.46
LIG1-205ENST00000593425 MAPK7Q13164 816 aa17.94■□□□□ 0.46
LIG1-205ENST00000593425 GNL2Q13823 731 aaKnown RBP17.94■□□□□ 0.46
LIG1-205ENST00000593425 UBXN2BQ14CS0 331 aa17.94■□□□□ 0.46
LIG1-205ENST00000593425 VARS2Q5ST30 1063 aaKnown RBP17.94■□□□□ 0.46
LIG1-205ENST00000593425 SLC8B1Q6J4K2 584 aa17.94■□□□□ 0.46
LIG1-205ENST00000593425 ZC3H14Q6PJT7 736 aaKnown RBP17.94■□□□□ 0.46
LIG1-205ENST00000593425 RTL10Q7L3V2 364 aa17.94■□□□□ 0.46
LIG1-205ENST00000593425 ERMP1Q7Z2K6 904 aa17.94■□□□□ 0.46
LIG1-205ENST00000593425 APBB1IPQ7Z5R6 666 aaPredicted RBP17.94■□□□□ 0.46
LIG1-205ENST00000593425 RUSC1Q9BVN2 902 aa17.94■□□□□ 0.46
LIG1-205ENST00000593425 PLA2G2FQ9BZM2 168 aa17.94■□□□□ 0.46
LIG1-205ENST00000593425 TMEM134Q9H6X4 195 aa17.94■□□□□ 0.46
LIG1-205ENST00000593425 LTB4R2Q9NPC1 389 aa17.94■□□□□ 0.46
LIG1-205ENST00000593425 TOPORSQ9NS56 1045 aaPredicted RBP17.94■□□□□ 0.46
LIG1-205ENST00000593425 ARHGAP28Q9P2N2 729 aa17.94■□□□□ 0.46
LIG1-205ENST00000593425 NOL7Q9UMY1 257 aaKnown RBP17.94■□□□□ 0.46
LIG1-205ENST00000593425 COL4A2P08572 1712 aa17.94■□□□□ 0.46
LIG1-205ENST00000593425 PODXLO00592 558 aa17.93■□□□□ 0.46
LIG1-205ENST00000593425 MEFVO15553 781 aaPredicted RBP17.93■□□□□ 0.46
LIG1-205ENST00000593425 CEBPBP17676 345 aa17.93■□□□□ 0.46
LIG1-205ENST00000593425 HMGN5P82970 282 aaKnown RBP17.93■□□□□ 0.46
LIG1-205ENST00000593425 PTGDRQ13258 359 aa17.93■□□□□ 0.46
LIG1-205ENST00000593425 IL17AQ16552 155 aa17.93■□□□□ 0.46
LIG1-205ENST00000593425 KIAA2013Q8IYS2 634 aa17.93■□□□□ 0.46
LIG1-205ENST00000593425 ZNF461Q8TAF7 563 aa17.93■□□□□ 0.46
LIG1-205ENST00000593425 MRPL4Q9BYD3 311 aaKnown RBP17.93■□□□□ 0.46
LIG1-205ENST00000593425 PPP4R2Q9NY27 417 aa17.93■□□□□ 0.46
LIG1-205ENST00000593425 DAXXQ9UER7 740 aaPredicted RBP17.93■□□□□ 0.46
LIG1-205ENST00000593425 PCDHB6Q9Y5E3 794 aa17.93■□□□□ 0.46
LIG1-205ENST00000593425 CACNA1IQ9P0X4 2223 aa17.92■□□□□ 0.46
LIG1-205ENST00000593425 ARHGEF37A1IGU5 675 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms