RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 CCDC102AQ96A19 550 aa12.84□□□□□ -0.35
NPC1-214ENST00000593280 FAM212AQ96EL1 285 aa12.84□□□□□ -0.35
NPC1-214ENST00000593280 SCLT1Q96NL6 688 aa12.84□□□□□ -0.35
NPC1-214ENST00000593280 PSMB7Q99436 277 aa12.84□□□□□ -0.35
NPC1-214ENST00000593280 FDXACB1Q9BRP7 624 aaPredicted RBP12.84□□□□□ -0.35
NPC1-214ENST00000593280 IMPG2Q9BZV3 1241 aa12.84□□□□□ -0.35
NPC1-214ENST00000593280 CDT1Q9H211 546 aa12.84□□□□□ -0.35
NPC1-214ENST00000593280 EPC1Q9H2F5 836 aa12.84□□□□□ -0.35
NPC1-214ENST00000593280 GNEQ9Y223 722 aaKnown RBP12.84□□□□□ -0.35
NPC1-214ENST00000593280 RRN3P2A6NIE6 340 aa12.83□□□□□ -0.36
NPC1-214ENST00000593280 RTN2O75298 545 aa12.83□□□□□ -0.36
NPC1-214ENST00000593280 MMEP08473 750 aa12.83□□□□□ -0.36
NPC1-214ENST00000593280 CLTAP09496 248 aa12.83□□□□□ -0.36
NPC1-214ENST00000593280 IQCF3P0C7M6 154 aa12.83□□□□□ -0.36
NPC1-214ENST00000593280 CHRNB2P17787 502 aa12.83□□□□□ -0.36
NPC1-214ENST00000593280 TBXAS1P24557 533 aaPredicted RBP12.83□□□□□ -0.36
NPC1-214ENST00000593280 CYP2C19P33261 490 aa12.83□□□□□ -0.36
NPC1-214ENST00000593280 NOP14P78316 857 aaKnown RBP12.83□□□□□ -0.36
NPC1-214ENST00000593280 FMO1Q01740 532 aa12.83□□□□□ -0.36
NPC1-214ENST00000593280 CRHR2Q13324 411 aa12.83□□□□□ -0.36
NPC1-214ENST00000593280 CUL2Q13617 745 aa12.83□□□□□ -0.36
NPC1-214ENST00000593280 CCL14Q16627 93 aa12.83□□□□□ -0.36
NPC1-214ENST00000593280 MARCH8Q5T0T0 291 aa12.83□□□□□ -0.36
NPC1-214ENST00000593280 CCDC181Q5TID7 509 aa12.83□□□□□ -0.36
NPC1-214ENST00000593280 SPOPLQ6IQ16 392 aa12.83□□□□□ -0.36
NPC1-214ENST00000593280 CREG2Q8IUH2 290 aa12.83□□□□□ -0.36
NPC1-214ENST00000593280 NOA1Q8NC60 698 aaKnown RBP12.83□□□□□ -0.36
NPC1-214ENST00000593280 ARID3AQ99856 593 aa12.83□□□□□ -0.36
NPC1-214ENST00000593280 MTMR12Q9C0I1 747 aa12.83□□□□□ -0.36
NPC1-214ENST00000593280 THAP2Q9H0W7 228 aa12.83□□□□□ -0.36
NPC1-214ENST00000593280 ISCUQ9H1K1 167 aa12.83□□□□□ -0.36
NPC1-214ENST00000593280 ABT1Q9ULW3 272 aaKnown RBP12.83□□□□□ -0.36
NPC1-214ENST00000593280 PDE2AO00408 941 aaPredicted RBP12.82□□□□□ -0.36
NPC1-214ENST00000593280 IL18RAPO95256 599 aa12.82□□□□□ -0.36
NPC1-214ENST00000593280 F2P00734 622 aa12.82□□□□□ -0.36
NPC1-214ENST00000593280 FTLP02792 175 aaPredicted RBP12.82□□□□□ -0.36
NPC1-214ENST00000593280 MCF2P10911 925 aa12.82□□□□□ -0.36
NPC1-214ENST00000593280 GZMAP12544 262 aa12.82□□□□□ -0.36
NPC1-214ENST00000593280 CXCR5P32302 372 aa12.82□□□□□ -0.36
NPC1-214ENST00000593280 PAFAH1B1P43034 410 aa12.82□□□□□ -0.36
NPC1-214ENST00000593280 BPIFB4P59827 614 aa12.82□□□□□ -0.36
NPC1-214ENST00000593280 AMHR2Q16671 573 aa12.82□□□□□ -0.36
NPC1-214ENST00000593280 DUOXA2Q1HG44 320 aa12.82□□□□□ -0.36
NPC1-214ENST00000593280 ZNF572Q7Z3I7 529 aaPredicted RBP12.82□□□□□ -0.36
NPC1-214ENST00000593280 ZNF410Q86VK4 478 aa12.82□□□□□ -0.36
NPC1-214ENST00000593280 CDR2LQ86X02 465 aaPredicted RBP12.82□□□□□ -0.36
NPC1-214ENST00000593280 MSANTD4Q8NCY6 345 aa12.82□□□□□ -0.36
NPC1-214ENST00000593280 SLC35G2Q8TBE7 412 aa12.82□□□□□ -0.36
NPC1-214ENST00000593280 TAF4BQ92750 862 aa12.82□□□□□ -0.36
NPC1-214ENST00000593280 LENG1Q96BZ8 264 aaPredicted RBP12.82□□□□□ -0.36
NPC1-214ENST00000593280 ARHGEF26Q96DR7 871 aa12.82□□□□□ -0.36
NPC1-214ENST00000593280 PCDHB18PQ96TA0 734 aa12.82□□□□□ -0.36
NPC1-214ENST00000593280 PARD6BQ9BYG5 372 aa12.82□□□□□ -0.36
NPC1-214ENST00000593280 PDZD7Q9H5P4 517 aa12.82□□□□□ -0.36
NPC1-214ENST00000593280 ANKZF1Q9H8Y5 726 aa12.82□□□□□ -0.36
NPC1-214ENST00000593280 APOBEC3GQ9HC16 384 aaKnown RBP12.82□□□□□ -0.36
NPC1-214ENST00000593280 ACP6Q9NPH0 428 aa12.82□□□□□ -0.36
NPC1-214ENST00000593280 CSDE1O75534 798 aaKnown RBP12.81□□□□□ -0.36
NPC1-214ENST00000593280 ERLIN2O94905 339 aa12.81□□□□□ -0.36
NPC1-214ENST00000593280 TNNC2P02585 160 aa12.81□□□□□ -0.36
NPC1-214ENST00000593280 RHOXF2BP0C7M4 288 aa12.81□□□□□ -0.36
NPC1-214ENST00000593280 TMEM191BP0C7N4 346 aa12.81□□□□□ -0.36
NPC1-214ENST00000593280 SMIM10L2AP0DMW4 78 aa12.81□□□□□ -0.36
NPC1-214ENST00000593280 SMIM10L2BP0DMW5 78 aa12.81□□□□□ -0.36
NPC1-214ENST00000593280 CPT1AP50416 773 aa12.81□□□□□ -0.36
NPC1-214ENST00000593280 DNA2P51530 1060 aa12.81□□□□□ -0.36
NPC1-214ENST00000593280 APLP1P51693 650 aa12.81□□□□□ -0.36
NPC1-214ENST00000593280 CLCN6P51797 869 aa12.81□□□□□ -0.36
NPC1-214ENST00000593280 OSTNP61366 133 aa12.81□□□□□ -0.36
NPC1-214ENST00000593280 TFAMQ00059 246 aaKnown RBP12.81□□□□□ -0.36
NPC1-214ENST00000593280 RPS6KA1Q15418 735 aa12.81□□□□□ -0.36
NPC1-214ENST00000593280 PEX26Q7Z412 305 aa12.81□□□□□ -0.36
NPC1-214ENST00000593280 SLFN11Q7Z7L1 901 aa12.81□□□□□ -0.36
NPC1-214ENST00000593280 DAAM2Q86T65 1068 aa12.81□□□□□ -0.36
NPC1-214ENST00000593280 ZNF677Q86XU0 584 aa12.81□□□□□ -0.36
NPC1-214ENST00000593280 RHOT2Q8IXI1 618 aa12.81□□□□□ -0.36
NPC1-214ENST00000593280 KIAA0319LQ8IZA0 1049 aa12.81□□□□□ -0.36
NPC1-214ENST00000593280 ANKRD36BP1Q96IX9 119 aa12.81□□□□□ -0.36
NPC1-214ENST00000593280 CALR3Q96L12 384 aaKnown RBP12.81□□□□□ -0.36
NPC1-214ENST00000593280 RHOXF2Q9BQY4 288 aa12.81□□□□□ -0.36
NPC1-214ENST00000593280 AP5M1Q9H0R1 490 aa12.81□□□□□ -0.36
NPC1-214ENST00000593280 RPF1Q9H9Y2 349 aaKnown RBP12.81□□□□□ -0.36
NPC1-214ENST00000593280 SETD4Q9NVD3 440 aa12.81□□□□□ -0.36
NPC1-214ENST00000593280 RNF14Q9UBS8 474 aa12.81□□□□□ -0.36
NPC1-214ENST00000593280 GJD2Q9UKL4 321 aa12.81□□□□□ -0.36
NPC1-214ENST00000593280 PACSIN2Q9UNF0 486 aaPredicted RBP12.81□□□□□ -0.36
NPC1-214ENST00000593280 FAM170AA1A519 330 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 RRP9O43818 475 aaKnown RBP12.8□□□□□ -0.36
NPC1-214ENST00000593280 B4GALT4O60513 344 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 TOMM70O94826 608 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 KIF4AO95239 1232 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 ASS1P00966 412 aaKnown RBP12.8□□□□□ -0.36
NPC1-214ENST00000593280 CXCL8P10145 99 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 ACO1P21399 889 aaKnown RBP12.8□□□□□ -0.36
NPC1-214ENST00000593280 GPC5P78333 572 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 ITIH3Q06033 890 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 C2orf54Q08AI8 447 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 TRPC3Q13507 836 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 MFSD10Q14728 455 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 KYAT1Q16773 422 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms